RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NPATQ14207 1427 aa25.22■■□□□ 1.63
PSPC1-201ENST00000338910 SMG6Q86US8 1419 aaKnown RBP25.22■■□□□ 1.63
PSPC1-201ENST00000338910 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
PSPC1-201ENST00000338910 ABCC3O15438 1527 aa25.2■■□□□ 1.62
PSPC1-201ENST00000338910 RNF123Q5XPI4 1314 aa25.19■■□□□ 1.62
PSPC1-201ENST00000338910 TESK2Q96S53 571 aa25.18■■□□□ 1.62
PSPC1-201ENST00000338910 MADDQ8WXG6 1647 aa25.18■■□□□ 1.62
PSPC1-201ENST00000338910 STAC3Q96MF2 364 aa25.17■■□□□ 1.62
PSPC1-201ENST00000338910 LAMC1P11047 1609 aa25.16■■□□□ 1.62
PSPC1-201ENST00000338910 IPO9Q96P70 1041 aaKnown RBP25.15■■□□□ 1.62
PSPC1-201ENST00000338910 KIF1BO60333 1816 aa25.15■■□□□ 1.62
PSPC1-201ENST00000338910 ZMYM4Q5VZL5 1548 aa25.14■■□□□ 1.61
PSPC1-201ENST00000338910 NEURL4Q96JN8 1562 aa25.13■■□□□ 1.61
PSPC1-201ENST00000338910 CHGAP10645 457 aaKnown RBP25.13■■□□□ 1.61
PSPC1-201ENST00000338910 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
PSPC1-201ENST00000338910 ANP32AP39687 249 aaKnown RBP25.13■■□□□ 1.61
PSPC1-201ENST00000338910 NUDCQ9Y266 331 aa25.12■■□□□ 1.61
PSPC1-201ENST00000338910 CAMSAP1Q5T5Y3 1602 aa25.11■■□□□ 1.61
PSPC1-201ENST00000338910 KIF13AQ9H1H9 1805 aa25.11■■□□□ 1.61
PSPC1-201ENST00000338910 TMF1P82094 1093 aa25.1■■□□□ 1.61
PSPC1-201ENST00000338910 CCDC136Q96JN2 1154 aa25.1■■□□□ 1.61
PSPC1-201ENST00000338910 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
PSPC1-201ENST00000338910 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
PSPC1-201ENST00000338910 COL17A1Q9UMD9 1497 aaPredicted RBP25.07■■□□□ 1.6
PSPC1-201ENST00000338910 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
PSPC1-201ENST00000338910 SIGLEC1Q9BZZ2 1709 aa25.07■■□□□ 1.6
PSPC1-201ENST00000338910 ADGRB3O60242 1522 aa25.05■■□□□ 1.6
PSPC1-201ENST00000338910 NOS1P29475 1434 aa25.05■■□□□ 1.6
PSPC1-201ENST00000338910 CFAP70Q5T0N1 1121 aa25.04■■□□□ 1.6
PSPC1-201ENST00000338910 ZBTB47Q9UFB7 747 aaPredicted RBP25.04■■□□□ 1.6
PSPC1-201ENST00000338910 MYOM2P54296 1465 aa25.04■■□□□ 1.6
PSPC1-201ENST00000338910 PER1O15534 1290 aaPredicted RBP25.04■■□□□ 1.6
PSPC1-201ENST00000338910 RALBP1Q15311 655 aa25.03■■□□□ 1.6
PSPC1-201ENST00000338910 RTL5Q5HYW3 569 aaPredicted RBP25.03■■□□□ 1.6
PSPC1-201ENST00000338910 PANK3Q9H999 370 aa25.03■■□□□ 1.6
PSPC1-201ENST00000338910 IFT172Q9UG01 1749 aa25.02■■□□□ 1.6
PSPC1-201ENST00000338910 ARHGAP31Q2M1Z3 1444 aa25.02■■□□□ 1.6
PSPC1-201ENST00000338910 ZC3H13Q5T200 1668 aaKnown RBP25.02■■□□□ 1.6
PSPC1-201ENST00000338910 PNISRQ8TF01 805 aaKnown RBP25.01■■□□□ 1.59
PSPC1-201ENST00000338910 IQGAP1P46940 1657 aa25.01■■□□□ 1.59
PSPC1-201ENST00000338910 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
PSPC1-201ENST00000338910 SYNMO15061 1565 aa25■■□□□ 1.59
PSPC1-201ENST00000338910 SCAF11Q99590 1463 aaKnown RBP25■■□□□ 1.59
PSPC1-201ENST00000338910 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
PSPC1-201ENST00000338910 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
PSPC1-201ENST00000338910 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
PSPC1-201ENST00000338910 CC2D1BQ5T0F9 858 aaKnown RBP24.97■■□□□ 1.59
PSPC1-201ENST00000338910 IDI1Q13907 227 aa24.96■■□□□ 1.59
PSPC1-201ENST00000338910 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
PSPC1-201ENST00000338910 PIK3C2BO00750 1634 aa24.95■■□□□ 1.58
PSPC1-201ENST00000338910 REREQ9P2R6 1566 aa24.94■■□□□ 1.58
PSPC1-201ENST00000338910 PPLO60437 1756 aa24.93■■□□□ 1.58
PSPC1-201ENST00000338910 BRD4O60885 1362 aaPredicted RBP24.93■■□□□ 1.58
PSPC1-201ENST00000338910 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
PSPC1-201ENST00000338910 MLECQ14165 292 aa24.93■■□□□ 1.58
PSPC1-201ENST00000338910 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
PSPC1-201ENST00000338910 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
PSPC1-201ENST00000338910 AGLP35573 1532 aa24.92■■□□□ 1.58
PSPC1-201ENST00000338910 RPGRIP1LQ68CZ1 1315 aa24.92■■□□□ 1.58
PSPC1-201ENST00000338910 SLC52A1Q9NWF4 448 aa24.91■■□□□ 1.58
PSPC1-201ENST00000338910 EIF3AQ14152 1382 aaKnown RBP24.9■■□□□ 1.58
PSPC1-201ENST00000338910 PREX1Q8TCU6 1659 aa24.9■■□□□ 1.58
PSPC1-201ENST00000338910 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
PSPC1-201ENST00000338910 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
PSPC1-201ENST00000338910 CDCA8Q53HL2 280 aa24.89■■□□□ 1.58
PSPC1-201ENST00000338910 C14orf93Q9H972 538 aaKnown RBP24.87■■□□□ 1.57
PSPC1-201ENST00000338910 ARHGEF40Q8TER5 1519 aa24.87■■□□□ 1.57
PSPC1-201ENST00000338910 ANO8Q9HCE9 1232 aaPredicted RBP24.86■■□□□ 1.57
PSPC1-201ENST00000338910 PPP6R1Q9UPN7 881 aa24.86■■□□□ 1.57
PSPC1-201ENST00000338910 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
PSPC1-201ENST00000338910 TMEM132EQ6IEE7 984 aa24.84■■□□□ 1.57
PSPC1-201ENST00000338910 KNSTRNQ9Y448 316 aa24.84■■□□□ 1.57
PSPC1-201ENST00000338910 NEXMIFQ5QGS0 1516 aa24.84■■□□□ 1.57
PSPC1-201ENST00000338910 LRPPRCP42704 1394 aaKnown RBP24.84■■□□□ 1.57
PSPC1-201ENST00000338910 CLTCQ00610 1675 aaKnown RBP24.83■■□□□ 1.57
PSPC1-201ENST00000338910 ERVK-7P63135 1459 aa24.82■■□□□ 1.56
PSPC1-201ENST00000338910 TRAK1Q9UPV9 953 aa24.82■■□□□ 1.56
PSPC1-201ENST00000338910 TCERG1O14776 1098 aaKnown RBP24.81■■□□□ 1.56
PSPC1-201ENST00000338910 IL27Q8NEV9 243 aa24.81■■□□□ 1.56
PSPC1-201ENST00000338910 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
PSPC1-201ENST00000338910 MYO5BQ9ULV0 1848 aa24.8■■□□□ 1.56
PSPC1-201ENST00000338910 SENP3Q9H4L4 574 aaPredicted RBP24.8■■□□□ 1.56
PSPC1-201ENST00000338910 USP35Q9P2H5 1018 aa24.79■■□□□ 1.56
PSPC1-201ENST00000338910 TMEM131LA2VDJ0 1609 aa24.78■■□□□ 1.56
PSPC1-201ENST00000338910 ADGRB1O14514 1584 aa24.78■■□□□ 1.56
PSPC1-201ENST00000338910 RRP1P56182 461 aaKnown RBP24.78■■□□□ 1.56
PSPC1-201ENST00000338910 SALL2Q9Y467 1007 aaPredicted RBP24.76■■□□□ 1.55
PSPC1-201ENST00000338910 SLC24A1O60721 1099 aa24.76■■□□□ 1.55
PSPC1-201ENST00000338910 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
PSPC1-201ENST00000338910 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
PSPC1-201ENST00000338910 CENPJQ9HC77 1338 aaPredicted RBP24.75■■□□□ 1.55
PSPC1-201ENST00000338910 PDE4AP27815 886 aa24.75■■□□□ 1.55
PSPC1-201ENST00000338910 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
PSPC1-201ENST00000338910 ESF1Q9H501 851 aaKnown RBP24.74■■□□□ 1.55
PSPC1-201ENST00000338910 EXOC6Q8TAG9 804 aa24.74■■□□□ 1.55
PSPC1-201ENST00000338910 BACH2Q9BYV9 841 aa24.73■■□□□ 1.55
PSPC1-201ENST00000338910 NEFMP07197 916 aa24.73■■□□□ 1.55
PSPC1-201ENST00000338910 ZFYVE9O95405 1425 aa24.72■■□□□ 1.55
PSPC1-201ENST00000338910 MYO3AQ8NEV4 1616 aa24.72■■□□□ 1.55
PSPC1-201ENST00000338910 MS4A1P11836 297 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms