RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
PCDH8-201ENST00000338862 PTPRGP23470 1445 aa17.95■□□□□ 0.46
PCDH8-201ENST00000338862 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
PCDH8-201ENST00000338862 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
PCDH8-201ENST00000338862 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
PCDH8-201ENST00000338862 MTHFSP49914 203 aa17.94■□□□□ 0.46
PCDH8-201ENST00000338862 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
PCDH8-201ENST00000338862 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
PCDH8-201ENST00000338862 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
PCDH8-201ENST00000338862 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
PCDH8-201ENST00000338862 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
PCDH8-201ENST00000338862 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
PCDH8-201ENST00000338862 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
PCDH8-201ENST00000338862 WDR62O43379 1518 aa17.92■□□□□ 0.46
PCDH8-201ENST00000338862 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
PCDH8-201ENST00000338862 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
PCDH8-201ENST00000338862 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
PCDH8-201ENST00000338862 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
PCDH8-201ENST00000338862 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
PCDH8-201ENST00000338862 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
PCDH8-201ENST00000338862 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
PCDH8-201ENST00000338862 RLBP1P12271 317 aa17.89■□□□□ 0.46
PCDH8-201ENST00000338862 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
PCDH8-201ENST00000338862 C22orf23Q9BZE7 217 aa17.88■□□□□ 0.45
PCDH8-201ENST00000338862 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
PCDH8-201ENST00000338862 FOXD4L5Q5VV16 416 aaPredicted RBP17.87■□□□□ 0.45
PCDH8-201ENST00000338862 FOXD4L4Q8WXT5 416 aaPredicted RBP17.87■□□□□ 0.45
PCDH8-201ENST00000338862 ANP32BQ92688 251 aaKnown RBP17.87■□□□□ 0.45
PCDH8-201ENST00000338862 PRAG1Q86YV5 1406 aa17.87■□□□□ 0.45
PCDH8-201ENST00000338862 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
PCDH8-201ENST00000338862 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
PCDH8-201ENST00000338862 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
PCDH8-201ENST00000338862 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
PCDH8-201ENST00000338862 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
PCDH8-201ENST00000338862 DZIP1LQ8IYY4 767 aaKnown RBP17.85■□□□□ 0.45
PCDH8-201ENST00000338862 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
PCDH8-201ENST00000338862 RSPH6AQ9H0K4 717 aa17.85■□□□□ 0.45
PCDH8-201ENST00000338862 STAG3Q9UJ98 1225 aa17.85■□□□□ 0.45
PCDH8-201ENST00000338862 SOX12O15370 315 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 EXOSC9Q06265 439 aaKnown RBP17.84■□□□□ 0.45
PCDH8-201ENST00000338862 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 KDM5CP41229 1560 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 TRAK2O60296 914 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 ANKRD45Q5TZF3 282 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
PCDH8-201ENST00000338862 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.45
PCDH8-201ENST00000338862 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
PCDH8-201ENST00000338862 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
PCDH8-201ENST00000338862 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
PCDH8-201ENST00000338862 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
PCDH8-201ENST00000338862 KIF14Q15058 1648 aa17.82■□□□□ 0.44
PCDH8-201ENST00000338862 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
PCDH8-201ENST00000338862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCDH8-201ENST00000338862 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
PCDH8-201ENST00000338862 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
PCDH8-201ENST00000338862 FAM43AQ8N2R8 423 aa17.81■□□□□ 0.44
PCDH8-201ENST00000338862 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
PCDH8-201ENST00000338862 FOXD4L6Q3SYB3 417 aaPredicted RBP17.8■□□□□ 0.44
PCDH8-201ENST00000338862 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
PCDH8-201ENST00000338862 FOXD4L3Q6VB84 417 aaPredicted RBP17.8■□□□□ 0.44
PCDH8-201ENST00000338862 RRAGDQ9NQL2 400 aaPredicted RBP17.8■□□□□ 0.44
PCDH8-201ENST00000338862 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
PCDH8-201ENST00000338862 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
PCDH8-201ENST00000338862 RAPGEF6Q8TEU7 1601 aa17.79■□□□□ 0.44
PCDH8-201ENST00000338862 MCM4P33991 863 aa17.79■□□□□ 0.44
PCDH8-201ENST00000338862 UHRF1BP1Q6BDS2 1440 aa17.79■□□□□ 0.44
PCDH8-201ENST00000338862 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
PCDH8-201ENST00000338862 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
PCDH8-201ENST00000338862 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
PCDH8-201ENST00000338862 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
PCDH8-201ENST00000338862 CHMP5Q9NZZ3 219 aa17.78■□□□□ 0.44
PCDH8-201ENST00000338862 FBLN1P23142 703 aa17.78■□□□□ 0.44
PCDH8-201ENST00000338862 RIPK4P57078 832 aa17.77■□□□□ 0.44
PCDH8-201ENST00000338862 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.44
PCDH8-201ENST00000338862 KANK1Q14678 1352 aa17.77■□□□□ 0.43
PCDH8-201ENST00000338862 ATP10BO94823 1461 aa17.77■□□□□ 0.43
PCDH8-201ENST00000338862 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDH8-201ENST00000338862 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
PCDH8-201ENST00000338862 MBD5Q9P267 1494 aa17.76■□□□□ 0.43
PCDH8-201ENST00000338862 MRC2Q9UBG0 1479 aa17.76■□□□□ 0.43
PCDH8-201ENST00000338862 HMOX1P09601 288 aa17.76■□□□□ 0.43
PCDH8-201ENST00000338862 A2MP01023 1474 aa17.76■□□□□ 0.43
PCDH8-201ENST00000338862 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
PCDH8-201ENST00000338862 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
PCDH8-201ENST00000338862 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
PCDH8-201ENST00000338862 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
PCDH8-201ENST00000338862 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
PCDH8-201ENST00000338862 KIAA0556O60303 1618 aa17.73■□□□□ 0.43
PCDH8-201ENST00000338862 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
PCDH8-201ENST00000338862 MAGI2Q86UL8 1455 aa17.73■□□□□ 0.43
PCDH8-201ENST00000338862 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
PCDH8-201ENST00000338862 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
PCDH8-201ENST00000338862 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
PCDH8-201ENST00000338862 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
PCDH8-201ENST00000338862 COL17A1Q9UMD9 1497 aaPredicted RBP17.71■□□□□ 0.43
PCDH8-201ENST00000338862 GBP4Q96PP9 640 aa17.71■□□□□ 0.43
PCDH8-201ENST00000338862 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
PCDH8-201ENST00000338862 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
PCDH8-201ENST00000338862 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
PCDH8-201ENST00000338862 NSD3Q9BZ95 1437 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms