RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ZBED9Q6R2W3 1325 aa17.88■□□□□ 0.45
PARVB-201ENST00000338758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
PARVB-201ENST00000338758 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
PARVB-201ENST00000338758 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
PARVB-201ENST00000338758 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
PARVB-201ENST00000338758 ANP32EQ9BTT0 268 aa17.86■□□□□ 0.45
PARVB-201ENST00000338758 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
PARVB-201ENST00000338758 CCDC141Q6ZP82 1450 aa17.86■□□□□ 0.45
PARVB-201ENST00000338758 NLRP2Q9NX02 1062 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 TTC5Q8N0Z6 440 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
PARVB-201ENST00000338758 SPRYD3Q8NCJ5 442 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
PARVB-201ENST00000338758 ANKLE2Q86XL3 938 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
PARVB-201ENST00000338758 CNTLNQ9NXG0 1405 aa17.83■□□□□ 0.45
PARVB-201ENST00000338758 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
PARVB-201ENST00000338758 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 TRIM6-TRIM34B2RNG4 842 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 ABCC5O15440 1437 aa17.82■□□□□ 0.44
PARVB-201ENST00000338758 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
PARVB-201ENST00000338758 GPRASP1Q5JY77 1395 aa17.81■□□□□ 0.44
PARVB-201ENST00000338758 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
PARVB-201ENST00000338758 CAMSAP2Q08AD1 1489 aa17.8■□□□□ 0.44
PARVB-201ENST00000338758 ANKRD30BQ9BXX2 1392 aa17.8■□□□□ 0.44
PARVB-201ENST00000338758 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
PARVB-201ENST00000338758 ISY1Q9ULR0 285 aaKnown RBP17.79■□□□□ 0.44
PARVB-201ENST00000338758 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
PARVB-201ENST00000338758 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
PARVB-201ENST00000338758 RRP1P56182 461 aaKnown RBP17.78■□□□□ 0.44
PARVB-201ENST00000338758 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
PARVB-201ENST00000338758 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
PARVB-201ENST00000338758 GPATCH3Q96I76 525 aa17.77■□□□□ 0.44
PARVB-201ENST00000338758 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
PARVB-201ENST00000338758 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.43
PARVB-201ENST00000338758 PPP2R1AP30153 589 aa17.77■□□□□ 0.43
PARVB-201ENST00000338758 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
PARVB-201ENST00000338758 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
PARVB-201ENST00000338758 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
PARVB-201ENST00000338758 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
PARVB-201ENST00000338758 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
PARVB-201ENST00000338758 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
PARVB-201ENST00000338758 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
PARVB-201ENST00000338758 TULP1O00294 542 aaPredicted RBP17.75■□□□□ 0.43
PARVB-201ENST00000338758 GNAI1P63096 354 aa17.75■□□□□ 0.43
PARVB-201ENST00000338758 NCOA1Q15788 1441 aa17.75■□□□□ 0.43
PARVB-201ENST00000338758 FKBP5Q13451 457 aaPredicted RBP17.74■□□□□ 0.43
PARVB-201ENST00000338758 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
PARVB-201ENST00000338758 GOLGA6L4A6NEF3 574 aa17.73■□□□□ 0.43
PARVB-201ENST00000338758 IDI1Q13907 227 aa17.73■□□□□ 0.43
PARVB-201ENST00000338758 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
PARVB-201ENST00000338758 CDK11BP21127 795 aaKnown RBP17.73■□□□□ 0.43
PARVB-201ENST00000338758 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
PARVB-201ENST00000338758 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
PARVB-201ENST00000338758 ZNF692Q9BU19 519 aaPredicted RBP17.72■□□□□ 0.43
PARVB-201ENST00000338758 KIF14Q15058 1648 aa17.72■□□□□ 0.43
PARVB-201ENST00000338758 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
PARVB-201ENST00000338758 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
PARVB-201ENST00000338758 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
PARVB-201ENST00000338758 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
PARVB-201ENST00000338758 MSH5O43196 834 aa17.71■□□□□ 0.43
PARVB-201ENST00000338758 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
PARVB-201ENST00000338758 FANCAO15360 1455 aa17.71■□□□□ 0.43
PARVB-201ENST00000338758 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
PARVB-201ENST00000338758 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
PARVB-201ENST00000338758 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
PARVB-201ENST00000338758 PTMAP06454 111 aaKnown RBP17.7■□□□□ 0.42
PARVB-201ENST00000338758 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
PARVB-201ENST00000338758 PTPN23Q9H3S7 1636 aa17.7■□□□□ 0.42
PARVB-201ENST00000338758 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
PARVB-201ENST00000338758 DENND4BO75064 1496 aaPredicted RBP17.69■□□□□ 0.42
PARVB-201ENST00000338758 G3V3G9 751 aa17.69■□□□□ 0.42
PARVB-201ENST00000338758 DCAF8Q5TAQ9 597 aa17.69■□□□□ 0.42
PARVB-201ENST00000338758 DDX19BQ9UMR2 479 aa17.68■□□□□ 0.42
PARVB-201ENST00000338758 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
PARVB-201ENST00000338758 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
PARVB-201ENST00000338758 CENPQQ7L2Z9 268 aaPredicted RBP17.68■□□□□ 0.42
PARVB-201ENST00000338758 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
PARVB-201ENST00000338758 CDCA7LQ96GN5 454 aa17.67■□□□□ 0.42
PARVB-201ENST00000338758 ATP10BO94823 1461 aa17.67■□□□□ 0.42
PARVB-201ENST00000338758 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
PARVB-201ENST00000338758 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
PARVB-201ENST00000338758 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
PARVB-201ENST00000338758 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
PARVB-201ENST00000338758 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
PARVB-201ENST00000338758 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
PARVB-201ENST00000338758 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
PARVB-201ENST00000338758 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
PARVB-201ENST00000338758 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
PARVB-201ENST00000338758 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms