RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 KIF1BO60333 1816 aa13.81□□□□□ -0.2
ARHGEF3-202ENST00000338458 MROH2AA6NES4 1674 aa13.81□□□□□ -0.2
ARHGEF3-202ENST00000338458 LMTK2Q8IWU2 1503 aa13.81□□□□□ -0.2
ARHGEF3-202ENST00000338458 PANK3Q9H999 370 aa13.8□□□□□ -0.2
ARHGEF3-202ENST00000338458 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
ARHGEF3-202ENST00000338458 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
ARHGEF3-202ENST00000338458 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
ARHGEF3-202ENST00000338458 SAFB2Q14151 953 aaKnown RBP eCLIP13.78□□□□□ -0.2
ARHGEF3-202ENST00000338458 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
ARHGEF3-202ENST00000338458 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
ARHGEF3-202ENST00000338458 STK26Q9P289 416 aa13.77□□□□□ -0.21
ARHGEF3-202ENST00000338458 STAC3Q96MF2 364 aa13.76□□□□□ -0.21
ARHGEF3-202ENST00000338458 SCAF11Q99590 1463 aaKnown RBP13.75□□□□□ -0.21
ARHGEF3-202ENST00000338458 SYNMO15061 1565 aa13.74□□□□□ -0.21
ARHGEF3-202ENST00000338458 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
ARHGEF3-202ENST00000338458 ZMYM4Q5VZL5 1548 aa13.73□□□□□ -0.21
ARHGEF3-202ENST00000338458 BCANQ96GW7 911 aa13.73□□□□□ -0.21
ARHGEF3-202ENST00000338458 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF3-202ENST00000338458 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
ARHGEF3-202ENST00000338458 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
ARHGEF3-202ENST00000338458 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF3-202ENST00000338458 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
ARHGEF3-202ENST00000338458 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF3-202ENST00000338458 MYOM2P54296 1465 aa13.71□□□□□ -0.21
ARHGEF3-202ENST00000338458 LAMC1P11047 1609 aa13.71□□□□□ -0.22
ARHGEF3-202ENST00000338458 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
ARHGEF3-202ENST00000338458 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
ARHGEF3-202ENST00000338458 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF3-202ENST00000338458 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
ARHGEF3-202ENST00000338458 RPGRIP1LQ68CZ1 1315 aa13.69□□□□□ -0.22
ARHGEF3-202ENST00000338458 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
ARHGEF3-202ENST00000338458 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
ARHGEF3-202ENST00000338458 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 FKBP8Q14318 412 aa13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 RALBP1Q15311 655 aa13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
ARHGEF3-202ENST00000338458 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 PPLO60437 1756 aa13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
ARHGEF3-202ENST00000338458 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
ARHGEF3-202ENST00000338458 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
ARHGEF3-202ENST00000338458 PNISRQ8TF01 805 aaKnown RBP13.65□□□□□ -0.22
ARHGEF3-202ENST00000338458 PIK3C2BO00750 1634 aa13.65□□□□□ -0.22
ARHGEF3-202ENST00000338458 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
ARHGEF3-202ENST00000338458 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
ARHGEF3-202ENST00000338458 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
ARHGEF3-202ENST00000338458 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
ARHGEF3-202ENST00000338458 NEURL4Q96JN8 1562 aa13.64□□□□□ -0.23
ARHGEF3-202ENST00000338458 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 NEFLP07196 543 aa13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 POGKQ9P215 609 aa13.63□□□□□ -0.23
ARHGEF3-202ENST00000338458 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
ARHGEF3-202ENST00000338458 AGLP35573 1532 aa13.62□□□□□ -0.23
ARHGEF3-202ENST00000338458 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
ARHGEF3-202ENST00000338458 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
ARHGEF3-202ENST00000338458 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
ARHGEF3-202ENST00000338458 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
ARHGEF3-202ENST00000338458 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
ARHGEF3-202ENST00000338458 TMEM131LA2VDJ0 1609 aa13.6□□□□□ -0.23
ARHGEF3-202ENST00000338458 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
ARHGEF3-202ENST00000338458 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF3-202ENST00000338458 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF3-202ENST00000338458 ZBED9Q6R2W3 1325 aa13.59□□□□□ -0.23
ARHGEF3-202ENST00000338458 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
ARHGEF3-202ENST00000338458 REREQ9P2R6 1566 aa13.58□□□□□ -0.24
ARHGEF3-202ENST00000338458 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
ARHGEF3-202ENST00000338458 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
ARHGEF3-202ENST00000338458 RIMS2Q9UQ26 1411 aa13.57□□□□□ -0.24
ARHGEF3-202ENST00000338458 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
ARHGEF3-202ENST00000338458 A2ML1A8K2U0 1454 aa13.56□□□□□ -0.24
ARHGEF3-202ENST00000338458 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
ARHGEF3-202ENST00000338458 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
ARHGEF3-202ENST00000338458 TNRQ92752 1358 aa13.55□□□□□ -0.24
ARHGEF3-202ENST00000338458 QRICH2Q9H0J4 1663 aa13.55□□□□□ -0.24
ARHGEF3-202ENST00000338458 TXNDC2Q86VQ3 553 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 MYOM1P52179 1685 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 YTHDC2Q9H6S0 1430 aaKnown RBP13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 SPATA31D1Q6ZQQ2 1576 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 ADAMTS8Q9UP79 889 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 ASXL1Q8IXJ9 1541 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
ARHGEF3-202ENST00000338458 WDR43Q15061 677 aaKnown RBP eCLIP13.52□□□□□ -0.25
ARHGEF3-202ENST00000338458 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
ARHGEF3-202ENST00000338458 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
ARHGEF3-202ENST00000338458 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 LRPPRCP42704 1394 aaKnown RBP13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
ARHGEF3-202ENST00000338458 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms