RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
UBE2D3-202ENST00000338145 LTBP4Q8N2S1 1624 aa15.41■□□□□ 0.06
UBE2D3-202ENST00000338145 FMN1Q68DA7 1419 aa15.41■□□□□ 0.06
UBE2D3-202ENST00000338145 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
UBE2D3-202ENST00000338145 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
UBE2D3-202ENST00000338145 AGLP35573 1532 aa15.39■□□□□ 0.05
UBE2D3-202ENST00000338145 ARHGAP5Q13017 1502 aa15.39■□□□□ 0.05
UBE2D3-202ENST00000338145 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
UBE2D3-202ENST00000338145 CNTLNQ9NXG0 1405 aa15.39■□□□□ 0.05
UBE2D3-202ENST00000338145 CLIP1P30622 1438 aa15.38■□□□□ 0.05
UBE2D3-202ENST00000338145 NCOA1Q15788 1441 aa15.38■□□□□ 0.05
UBE2D3-202ENST00000338145 C3P01024 1663 aa15.38■□□□□ 0.05
UBE2D3-202ENST00000338145 DIP2CQ9Y2E4 1556 aa15.37■□□□□ 0.05
UBE2D3-202ENST00000338145 TROQ12816 1431 aaPredicted RBP15.37■□□□□ 0.05
UBE2D3-202ENST00000338145 KIF14Q15058 1648 aa15.37■□□□□ 0.05
UBE2D3-202ENST00000338145 NPATQ14207 1427 aa15.34■□□□□ 0.05
UBE2D3-202ENST00000338145 MAMSTRQ6ZN01 415 aa15.34■□□□□ 0.05
UBE2D3-202ENST00000338145 UBAP1LF5GYI3 381 aa15.32■□□□□ 0.04
UBE2D3-202ENST00000338145 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
UBE2D3-202ENST00000338145 POTEB2H3BUK9 544 aa15.31■□□□□ 0.04
UBE2D3-202ENST00000338145 CAMSAP1Q5T5Y3 1602 aa15.3■□□□□ 0.04
UBE2D3-202ENST00000338145 ZMYM3Q14202 1370 aa15.29■□□□□ 0.04
UBE2D3-202ENST00000338145 UBTFP17480 764 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-202ENST00000338145 C3orf67Q6ZVT6 689 aa15.29■□□□□ 0.04
UBE2D3-202ENST00000338145 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-202ENST00000338145 ABCC1P33527 1531 aa15.27■□□□□ 0.04
UBE2D3-202ENST00000338145 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-202ENST00000338145 NCKAP5LQ9HCH0 1330 aa15.27■□□□□ 0.04
UBE2D3-202ENST00000338145 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
UBE2D3-202ENST00000338145 MROH2AA6NES4 1674 aa15.27■□□□□ 0.03
UBE2D3-202ENST00000338145 PLA2R1Q13018 1463 aa15.27■□□□□ 0.03
UBE2D3-202ENST00000338145 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.03
UBE2D3-202ENST00000338145 SCUBE2Q9NQ36 999 aa15.26■□□□□ 0.03
UBE2D3-202ENST00000338145 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
UBE2D3-202ENST00000338145 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
UBE2D3-202ENST00000338145 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-202ENST00000338145 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
UBE2D3-202ENST00000338145 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
UBE2D3-202ENST00000338145 LHX8Q68G74 356 aa15.24■□□□□ 0.03
UBE2D3-202ENST00000338145 ITSN2Q9NZM3 1697 aa15.24■□□□□ 0.03
UBE2D3-202ENST00000338145 TCOF1Q13428 1488 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-202ENST00000338145 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
UBE2D3-202ENST00000338145 CRISPLD2Q9H0B8 497 aa15.21■□□□□ 0.03
UBE2D3-202ENST00000338145 SPAG9O60271 1321 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-202ENST00000338145 TOM1O60784 492 aa15.2■□□□□ 0.02
UBE2D3-202ENST00000338145 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
UBE2D3-202ENST00000338145 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
UBE2D3-202ENST00000338145 PDE4AP27815 886 aa15.19■□□□□ 0.02
UBE2D3-202ENST00000338145 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
UBE2D3-202ENST00000338145 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
UBE2D3-202ENST00000338145 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
UBE2D3-202ENST00000338145 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-202ENST00000338145 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
UBE2D3-202ENST00000338145 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-202ENST00000338145 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-202ENST00000338145 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
UBE2D3-202ENST00000338145 KIF3CO14782 793 aa15.16■□□□□ 0.02
UBE2D3-202ENST00000338145 HSPA1LP34931 641 aa15.16■□□□□ 0.02
UBE2D3-202ENST00000338145 TMC2Q8TDI7 906 aa15.16■□□□□ 0.02
UBE2D3-202ENST00000338145 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
UBE2D3-202ENST00000338145 LRRIQ1Q96JM4 1722 aa15.15■□□□□ 0.02
UBE2D3-202ENST00000338145 GGT6Q6P531 493 aa15.15■□□□□ 0.02
UBE2D3-202ENST00000338145 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
UBE2D3-202ENST00000338145 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 A2MP01023 1474 aa15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 CPS1P31327 1500 aa15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 CLTCQ00610 1675 aaKnown RBP15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.014e-13■■■■■ 32.7
UBE2D3-202ENST00000338145 MED1Q15648 1581 aaPredicted RBP15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
UBE2D3-202ENST00000338145 PLXNC1O60486 1568 aa15.13■□□□□ 0.01
UBE2D3-202ENST00000338145 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
UBE2D3-202ENST00000338145 MFSD10Q14728 455 aa15.13■□□□□ 0.01
UBE2D3-202ENST00000338145 A2ML1A8K2U0 1454 aa15.13■□□□□ 0.01
UBE2D3-202ENST00000338145 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
UBE2D3-202ENST00000338145 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
UBE2D3-202ENST00000338145 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
UBE2D3-202ENST00000338145 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-202ENST00000338145 OTUD5Q96G74 571 aa15.1■□□□□ 0.01
UBE2D3-202ENST00000338145 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-202ENST00000338145 SHANK2Q9UPX8 1470 aa15.09■□□□□ 0.01
UBE2D3-202ENST00000338145 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
UBE2D3-202ENST00000338145 FOXK1P85037 733 aa15.09■□□□□ 0.01
UBE2D3-202ENST00000338145 INO80Q9ULG1 1556 aaPredicted RBP15.08■□□□□ 0
UBE2D3-202ENST00000338145 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0
UBE2D3-202ENST00000338145 ANKLE2Q86XL3 938 aa15.07■□□□□ 0
UBE2D3-202ENST00000338145 SLAIN1Q8ND83 568 aa15.07■□□□□ 0
UBE2D3-202ENST00000338145 DDX27Q96GQ7 796 aaKnown RBP15.07■□□□□ 0
UBE2D3-202ENST00000338145 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
UBE2D3-202ENST00000338145 LARP6Q9BRS8 491 aaKnown RBP15.06■□□□□ 0
UBE2D3-202ENST00000338145 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
UBE2D3-202ENST00000338145 CCNB3Q8WWL7 1395 aa15.05■□□□□ -0
UBE2D3-202ENST00000338145 ADGBQ8N7X0 1667 aa15.05■□□□□ -0
UBE2D3-202ENST00000338145 TNRQ92752 1358 aa15.04■□□□□ -0
UBE2D3-202ENST00000338145 WDR70Q9NW82 654 aa15.04■□□□□ -0
UBE2D3-202ENST00000338145 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
UBE2D3-202ENST00000338145 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
UBE2D3-202ENST00000338145 PPP1R15BQ5SWA1 713 aa15.03■□□□□ -0
UBE2D3-202ENST00000338145 FAM135AQ9P2D6 1515 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms