RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SCAF11Q99590 1463 aaKnown RBP31.24■■■□□ 2.59
CLPTM1-201ENST00000337392 TMEM132EQ6IEE7 984 aa31.24■■■□□ 2.59
CLPTM1-201ENST00000337392 IQGAP1P46940 1657 aa31.24■■■□□ 2.59
CLPTM1-201ENST00000337392 FAM69CQ0P6D2 419 aa31.23■■■□□ 2.59
CLPTM1-201ENST00000337392 BRD4O60885 1362 aaPredicted RBP31.23■■■□□ 2.59
CLPTM1-201ENST00000337392 NLRP13Q86W25 1043 aa31.22■■■□□ 2.59
CLPTM1-201ENST00000337392 KIF1BO60333 1816 aa31.2■■■□□ 2.58
CLPTM1-201ENST00000337392 TRAK1Q9UPV9 953 aa31.19■■■□□ 2.58
CLPTM1-201ENST00000337392 CFAP74Q9C0B2 1584 aa31.18■■■□□ 2.58
CLPTM1-201ENST00000337392 LRPPRCP42704 1394 aaKnown RBP31.18■■■□□ 2.58
CLPTM1-201ENST00000337392 MAP3K4Q9Y6R4 1608 aa31.16■■■□□ 2.58
CLPTM1-201ENST00000337392 ABCC3O15438 1527 aa31.14■■■□□ 2.58
CLPTM1-201ENST00000337392 KNSTRNQ9Y448 316 aa31.13■■■□□ 2.57
CLPTM1-201ENST00000337392 NEO1Q92859 1461 aa31.13■■■□□ 2.57
CLPTM1-201ENST00000337392 B4GALNT3Q6L9W6 998 aa31.13■■■□□ 2.57
CLPTM1-201ENST00000337392 LMTK2Q8IWU2 1503 aa31.13■■■□□ 2.57
CLPTM1-201ENST00000337392 DIP2CQ9Y2E4 1556 aa31.13■■■□□ 2.57
CLPTM1-201ENST00000337392 TSPOAP1O95153 1857 aa31.12■■■□□ 2.57
CLPTM1-201ENST00000337392 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
CLPTM1-201ENST00000337392 NUDCQ9Y266 331 aa31.12■■■□□ 2.57
CLPTM1-201ENST00000337392 RIMBP3CA6NJZ7 1639 aa31.11■■■□□ 2.57
CLPTM1-201ENST00000337392 RIMBP3BA6NNM3 1639 aa31.11■■■□□ 2.57
CLPTM1-201ENST00000337392 RIMBP3Q9UFD9 1639 aa31.11■■■□□ 2.57
CLPTM1-201ENST00000337392 AMER1Q5JTC6 1135 aaPredicted RBP31.09■■■□□ 2.57
CLPTM1-201ENST00000337392 ADGRB3O60242 1522 aa31.08■■■□□ 2.57
CLPTM1-201ENST00000337392 RICTORQ6R327 1708 aa31.07■■■□□ 2.56
CLPTM1-201ENST00000337392 CDCA7LQ96GN5 454 aa31.07■■■□□ 2.56
CLPTM1-201ENST00000337392 SMG6Q86US8 1419 aaKnown RBP31.07■■■□□ 2.56
CLPTM1-201ENST00000337392 MYOM2P54296 1465 aa31.07■■■□□ 2.56
CLPTM1-201ENST00000337392 IDI1Q13907 227 aa31.06■■■□□ 2.56
CLPTM1-201ENST00000337392 FBXO31Q5XUX0 539 aaPredicted RBP31.06■■■□□ 2.56
CLPTM1-201ENST00000337392 IFT172Q9UG01 1749 aa31.06■■■□□ 2.56
CLPTM1-201ENST00000337392 STAC3Q96MF2 364 aa31.06■■■□□ 2.56
CLPTM1-201ENST00000337392 SAFB2Q14151 953 aaKnown RBP eCLIP31.05■■■□□ 2.56
CLPTM1-201ENST00000337392 EIF3AQ14152 1382 aaKnown RBP31.04■■■□□ 2.56
CLPTM1-201ENST00000337392 ERVK-7P63135 1459 aa31.03■■■□□ 2.56
CLPTM1-201ENST00000337392 PPP2R1AP30153 589 aa31.02■■■□□ 2.56
CLPTM1-201ENST00000337392 MLECQ14165 292 aa31.02■■■□□ 2.56
CLPTM1-201ENST00000337392 CAMSAP1Q5T5Y3 1602 aa31.02■■■□□ 2.56
CLPTM1-201ENST00000337392 CARD14Q9BXL6 1004 aa31.01■■■□□ 2.56
CLPTM1-201ENST00000337392 ADAMTS8Q9UP79 889 aa31.01■■■□□ 2.55
CLPTM1-201ENST00000337392 MYOM1P52179 1685 aa31.01■■■□□ 2.55
CLPTM1-201ENST00000337392 SYNMO15061 1565 aa30.99■■■□□ 2.55
CLPTM1-201ENST00000337392 CDCA8Q53HL2 280 aa30.98■■■□□ 2.55
CLPTM1-201ENST00000337392 C14orf93Q9H972 538 aaKnown RBP30.97■■■□□ 2.55
CLPTM1-201ENST00000337392 PIK3C2GO75747 1445 aa30.97■■■□□ 2.55
CLPTM1-201ENST00000337392 NRXN1Q9ULB1 1477 aa30.97■■■□□ 2.55
CLPTM1-201ENST00000337392 CENPJQ9HC77 1338 aaPredicted RBP30.97■■■□□ 2.55
CLPTM1-201ENST00000337392 STK26Q9P289 416 aa30.96■■■□□ 2.55
CLPTM1-201ENST00000337392 KIAA1210Q9ULL0 1709 aa30.96■■■□□ 2.55
CLPTM1-201ENST00000337392 PPP4R2Q9NY27 417 aa30.95■■■□□ 2.55
CLPTM1-201ENST00000337392 PPLO60437 1756 aa30.95■■■□□ 2.54
CLPTM1-201ENST00000337392 SLC12A5Q9H2X9 1139 aa30.94■■■□□ 2.54
CLPTM1-201ENST00000337392 TNNT2P45379 298 aaPredicted RBP30.94■■■□□ 2.54
CLPTM1-201ENST00000337392 NEURL4Q96JN8 1562 aa30.93■■■□□ 2.54
CLPTM1-201ENST00000337392 KDM5AP29375 1690 aaKnown RBP30.91■■■□□ 2.54
CLPTM1-201ENST00000337392 DIP2BQ9P265 1576 aa30.9■■■□□ 2.54
CLPTM1-201ENST00000337392 CCDC146Q8IYE0 955 aa30.89■■■□□ 2.54
CLPTM1-201ENST00000337392 ASXL1Q8IXJ9 1541 aa30.88■■■□□ 2.53
CLPTM1-201ENST00000337392 ADGRB1O14514 1584 aa30.87■■■□□ 2.53
CLPTM1-201ENST00000337392 MYO5BQ9ULV0 1848 aa30.86■■■□□ 2.53
CLPTM1-201ENST00000337392 RBM19Q9Y4C8 960 aaKnown RBP30.85■■■□□ 2.53
CLPTM1-201ENST00000337392 WDR43Q15061 677 aaKnown RBP eCLIP30.83■■■□□ 2.53
CLPTM1-201ENST00000337392 NEXMIFQ5QGS0 1516 aa30.82■■■□□ 2.52
CLPTM1-201ENST00000337392 VGFO15240 615 aaPredicted RBP30.81■■■□□ 2.52
CLPTM1-201ENST00000337392 CABP2Q9NPB3 220 aa30.81■■■□□ 2.52
CLPTM1-201ENST00000337392 GLI2P10070 1586 aa30.81■■■□□ 2.52
CLPTM1-201ENST00000337392 PLIN1O60240 522 aa30.81■■■□□ 2.52
CLPTM1-201ENST00000337392 PIK3C2BO00750 1634 aa30.8■■■□□ 2.52
CLPTM1-201ENST00000337392 RNF123Q5XPI4 1314 aa30.8■■■□□ 2.52
CLPTM1-201ENST00000337392 BLMP54132 1417 aaPredicted RBP30.79■■■□□ 2.52
CLPTM1-201ENST00000337392 RPGRIP1LQ68CZ1 1315 aa30.78■■■□□ 2.52
CLPTM1-201ENST00000337392 RCAN3Q9UKA8 241 aa30.78■■■□□ 2.52
CLPTM1-201ENST00000337392 QRICH2Q9H0J4 1663 aa30.78■■■□□ 2.52
CLPTM1-201ENST00000337392 PLEKHH1Q9ULM0 1364 aa30.77■■■□□ 2.52
CLPTM1-201ENST00000337392 STAG3Q9UJ98 1225 aa30.76■■■□□ 2.51
CLPTM1-201ENST00000337392 NSD3Q9BZ95 1437 aa30.76■■■□□ 2.51
CLPTM1-201ENST00000337392 SETBP1Q9Y6X0 1596 aa30.75■■■□□ 2.51
CLPTM1-201ENST00000337392 ARHGAP31Q2M1Z3 1444 aa30.74■■■□□ 2.51
CLPTM1-201ENST00000337392 ERICH6BQ5W0A0 696 aa30.74■■■□□ 2.51
CLPTM1-201ENST00000337392 SLC52A1Q9NWF4 448 aa30.74■■■□□ 2.51
CLPTM1-201ENST00000337392 RRP1P56182 461 aaKnown RBP30.73■■■□□ 2.51
CLPTM1-201ENST00000337392 MYO3AQ8NEV4 1616 aa30.72■■■□□ 2.51
CLPTM1-201ENST00000337392 PREX1Q8TCU6 1659 aa30.72■■■□□ 2.51
CLPTM1-201ENST00000337392 EXOC6Q8TAG9 804 aa30.72■■■□□ 2.51
CLPTM1-201ENST00000337392 MINK1Q8N4C8 1332 aaPredicted RBP30.71■■■□□ 2.51
CLPTM1-201ENST00000337392 ANP32EQ9BTT0 268 aa30.71■■■□□ 2.51
CLPTM1-201ENST00000337392 CCDC136Q96JN2 1154 aa30.7■■■□□ 2.51
CLPTM1-201ENST00000337392 SBNO2Q9Y2G9 1366 aa30.7■■■□□ 2.5
CLPTM1-201ENST00000337392 APAF1O14727 1248 aa30.67■■■□□ 2.5
CLPTM1-201ENST00000337392 ZMYM4Q5VZL5 1548 aa30.66■■■□□ 2.5
CLPTM1-201ENST00000337392 PRAM1Q96QH2 718 aa30.66■■■□□ 2.5
CLPTM1-201ENST00000337392 ZC3H13Q5T200 1668 aaKnown RBP30.66■■■□□ 2.5
CLPTM1-201ENST00000337392 TULP4Q9NRJ4 1543 aa30.66■■■□□ 2.5
CLPTM1-201ENST00000337392 TMEM131LA2VDJ0 1609 aa30.66■■■□□ 2.5
CLPTM1-201ENST00000337392 MORC1Q86VD1 984 aa30.65■■■□□ 2.5
CLPTM1-201ENST00000337392 SRPK2P78362 688 aaKnown RBP30.65■■■□□ 2.5
CLPTM1-201ENST00000337392 SPINK5Q9NQ38 1064 aaPredicted RBP30.65■■■□□ 2.5
CLPTM1-201ENST00000337392 ARHGEF28Q8N1W1 1705 aaKnown RBP30.64■■■□□ 2.5
CLPTM1-201ENST00000337392 DMRT2Q9Y5R5 561 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms