RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RASSF8Q8NHQ8 419 aa9.82□□□□□ -0.84
TNPO1-201ENST00000337273 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
TNPO1-201ENST00000337273 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
TNPO1-201ENST00000337273 ARGLU1Q9NWB6 273 aaPredicted RBP9.82□□□□□ -0.84
TNPO1-201ENST00000337273 CDR1P51861 262 aa9.81□□□□□ -0.84
TNPO1-201ENST00000337273 TPD52L1Q16890 204 aaPredicted RBP9.81□□□□□ -0.84
TNPO1-201ENST00000337273 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
TNPO1-201ENST00000337273 R3HCC1Q9Y3T6 440 aaKnown RBP9.81□□□□□ -0.84
TNPO1-201ENST00000337273 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
TNPO1-201ENST00000337273 DIAPH3Q9NSV4 1193 aa9.81□□□□□ -0.84
TNPO1-201ENST00000337273 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
TNPO1-201ENST00000337273 RAPGEF2Q9Y4G8 1499 aa9.8□□□□□ -0.84
TNPO1-201ENST00000337273 PRKRIP1Q9H875 184 aaPredicted RBP9.8□□□□□ -0.84
TNPO1-201ENST00000337273 LETM1O95202 739 aaPredicted RBP9.8□□□□□ -0.84
TNPO1-201ENST00000337273 CCDC47Q96A33 483 aaKnown RBP9.8□□□□□ -0.84
TNPO1-201ENST00000337273 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
TNPO1-201ENST00000337273 CCDC88BA6NC98 1476 aa9.8□□□□□ -0.84
TNPO1-201ENST00000337273 ZKSCAN1P17029 563 aaPredicted RBP9.8□□□□□ -0.84
TNPO1-201ENST00000337273 CCDC144AA2RUR9 1427 aa9.8□□□□□ -0.84
TNPO1-201ENST00000337273 MEX3CQ5U5Q3 659 aaKnown RBP9.79□□□□□ -0.84
TNPO1-201ENST00000337273 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
TNPO1-201ENST00000337273 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
TNPO1-201ENST00000337273 MRE11P49959 708 aa9.78□□□□□ -0.84
TNPO1-201ENST00000337273 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
TNPO1-201ENST00000337273 WWC1Q8IX03 1113 aa9.78□□□□□ -0.84
TNPO1-201ENST00000337273 RNF214Q8ND24 703 aa9.78□□□□□ -0.84
TNPO1-201ENST00000337273 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
TNPO1-201ENST00000337273 ERICH4A6NGS2 130 aa9.78□□□□□ -0.84
TNPO1-201ENST00000337273 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
TNPO1-201ENST00000337273 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
TNPO1-201ENST00000337273 ANKRD45Q5TZF3 282 aa9.77□□□□□ -0.85
TNPO1-201ENST00000337273 AKAP17AQ02040 695 aaKnown RBP9.77□□□□□ -0.85
TNPO1-201ENST00000337273 TRIM29Q14134 588 aa9.77□□□□□ -0.85
TNPO1-201ENST00000337273 SLC4A10Q6U841 1118 aa9.76□□□□□ -0.85
TNPO1-201ENST00000337273 STK26Q9P289 416 aa9.76□□□□□ -0.85
TNPO1-201ENST00000337273 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
TNPO1-201ENST00000337273 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
TNPO1-201ENST00000337273 CALRP27797 417 aaKnown RBP9.76□□□□□ -0.85
TNPO1-201ENST00000337273 NAT10Q9H0A0 1025 aaKnown RBP9.76□□□□□ -0.85
TNPO1-201ENST00000337273 CWC15Q9P013 229 aaKnown RBP9.76□□□□□ -0.85
TNPO1-201ENST00000337273 ERCC4Q92889 916 aaPredicted RBP9.76□□□□□ -0.85
TNPO1-201ENST00000337273 AK7Q96M32 723 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 CCDC39Q9UFE4 941 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 CCDC66A2RUB6 948 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 GGT6Q6P531 493 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 SASS6Q6UVJ0 657 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 STK11IPQ8N1F8 1099 aa9.75□□□□□ -0.85
TNPO1-201ENST00000337273 AKNAQ7Z591 1439 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 EVC2Q86UK5 1308 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 MCM2P49736 904 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 CCP110O43303 1012 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 SRRTQ9BXP5 876 aaKnown RBP9.74□□□□□ -0.85
TNPO1-201ENST00000337273 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 ZNF330Q9Y3S2 320 aaPredicted RBP9.74□□□□□ -0.85
TNPO1-201ENST00000337273 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 MIA2Q96PC5 1412 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 HSP90B2PQ58FF3 399 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 KAT6BQ8WYB5 2073 aa9.74□□□□□ -0.85
TNPO1-201ENST00000337273 MARCH6O60337 910 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 RILPL2Q969X0 211 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 AMPHP49418 695 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 HMGN5P82970 282 aaKnown RBP9.73□□□□□ -0.85
TNPO1-201ENST00000337273 NEXNQ0ZGT2 675 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 RUFY1Q96T51 708 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 EID1Q9Y6B2 187 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 CUX1P39880 1505 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
TNPO1-201ENST00000337273 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 HOMER1Q86YM7 354 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 FAM177BA6PVY3 158 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 VGFO15240 615 aaPredicted RBP9.72□□□□□ -0.85
TNPO1-201ENST00000337273 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 USP47Q96K76 1375 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 DZIP1LQ8IYY4 767 aaKnown RBP9.72□□□□□ -0.85
TNPO1-201ENST00000337273 PES1O00541 588 aaKnown RBP9.72□□□□□ -0.85
TNPO1-201ENST00000337273 MBD3O95983 291 aa9.72□□□□□ -0.85
TNPO1-201ENST00000337273 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
TNPO1-201ENST00000337273 TTLL5Q6EMB2 1281 aa9.71□□□□□ -0.85
TNPO1-201ENST00000337273 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.85
TNPO1-201ENST00000337273 DCTN1Q14203 1278 aa9.71□□□□□ -0.85
TNPO1-201ENST00000337273 PANK3Q9H999 370 aa9.71□□□□□ -0.85
TNPO1-201ENST00000337273 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.71□□□□□ -0.85
TNPO1-201ENST00000337273 NINLQ9Y2I6 1382 aa9.71□□□□□ -0.86
TNPO1-201ENST00000337273 PANK1Q8TE04 598 aa9.71□□□□□ -0.86
TNPO1-201ENST00000337273 ERC2O15083 957 aa9.71□□□□□ -0.86
TNPO1-201ENST00000337273 MYO6Q9UM54 1294 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 ST20-MTHFSA0A0A6YYL1 179 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 ELL2O00472 640 aaPredicted RBP9.7□□□□□ -0.86
TNPO1-201ENST00000337273 TRDNQ13061 729 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 DDX58O95786 925 aaKnown RBP9.7□□□□□ -0.86
TNPO1-201ENST00000337273 WASHC2AQ641Q2 1341 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 KIF3BO15066 747 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 SMC3Q9UQE7 1217 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 CAVIN1Q6NZI2 390 aaKnown RBP9.7□□□□□ -0.86
TNPO1-201ENST00000337273 MNS1Q8NEH6 495 aa9.7□□□□□ -0.86
TNPO1-201ENST00000337273 BICD2Q8TD16 824 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms