RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 EXOC6Q8TAG9 804 aa11.84□□□□□ -0.51
SNCA-201ENST00000336904 PPP2R1AP30153 589 aa11.83□□□□□ -0.52
SNCA-201ENST00000336904 PTPRTO14522 1441 aa11.83□□□□□ -0.52
SNCA-201ENST00000336904 EIF2AK4Q9P2K8 1649 aaKnown RBP11.83□□□□□ -0.52
SNCA-201ENST00000336904 TET3O43151 1660 aa11.83□□□□□ -0.52
SNCA-201ENST00000336904 PPRC1Q5VV67 1664 aaKnown RBP11.83□□□□□ -0.52
SNCA-201ENST00000336904 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
SNCA-201ENST00000336904 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
SNCA-201ENST00000336904 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
SNCA-201ENST00000336904 SCAF11Q99590 1463 aaKnown RBP11.82□□□□□ -0.52
SNCA-201ENST00000336904 NPATQ14207 1427 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 CARD14Q9BXL6 1004 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 RCAN3Q9UKA8 241 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 DEPDC5O75140 1603 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 MSH5O43196 834 aa11.81□□□□□ -0.52
SNCA-201ENST00000336904 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
SNCA-201ENST00000336904 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNCA-201ENST00000336904 POGZQ7Z3K3 1410 aa11.8□□□□□ -0.52
SNCA-201ENST00000336904 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
SNCA-201ENST00000336904 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
SNCA-201ENST00000336904 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
SNCA-201ENST00000336904 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
SNCA-201ENST00000336904 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
SNCA-201ENST00000336904 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
SNCA-201ENST00000336904 EFCAB6Q5THR3 1501 aa11.78□□□□□ -0.52
SNCA-201ENST00000336904 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
SNCA-201ENST00000336904 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
SNCA-201ENST00000336904 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
SNCA-201ENST00000336904 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
SNCA-201ENST00000336904 PLPPR3Q6T4P5 718 aa11.77□□□□□ -0.52
SNCA-201ENST00000336904 VWDEQ8N2E2 1590 aa11.77□□□□□ -0.53
SNCA-201ENST00000336904 IDI1Q13907 227 aa11.76□□□□□ -0.53
SNCA-201ENST00000336904 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
SNCA-201ENST00000336904 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
SNCA-201ENST00000336904 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
SNCA-201ENST00000336904 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
SNCA-201ENST00000336904 APAF1O14727 1248 aa11.76□□□□□ -0.53
SNCA-201ENST00000336904 ERVK-7P63135 1459 aa11.75□□□□□ -0.53
SNCA-201ENST00000336904 LAMC1P11047 1609 aa11.75□□□□□ -0.53
SNCA-201ENST00000336904 EIF3AQ14152 1382 aaKnown RBP11.75□□□□□ -0.53
SNCA-201ENST00000336904 KIF1BO60333 1816 aa11.75□□□□□ -0.53
SNCA-201ENST00000336904 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
SNCA-201ENST00000336904 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
SNCA-201ENST00000336904 MAP3K4Q9Y6R4 1608 aa11.75□□□□□ -0.53
SNCA-201ENST00000336904 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
SNCA-201ENST00000336904 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
SNCA-201ENST00000336904 HECW2Q9P2P5 1572 aa11.73□□□□□ -0.53
SNCA-201ENST00000336904 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
SNCA-201ENST00000336904 MYOM1P52179 1685 aa11.73□□□□□ -0.53
SNCA-201ENST00000336904 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
SNCA-201ENST00000336904 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
SNCA-201ENST00000336904 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
SNCA-201ENST00000336904 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
SNCA-201ENST00000336904 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
SNCA-201ENST00000336904 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.53
SNCA-201ENST00000336904 ABCC3O15438 1527 aa11.71□□□□□ -0.54
SNCA-201ENST00000336904 NSD3Q9BZ95 1437 aa11.71□□□□□ -0.54
SNCA-201ENST00000336904 MORC1Q86VD1 984 aa11.7□□□□□ -0.54
SNCA-201ENST00000336904 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
SNCA-201ENST00000336904 ERICH6BQ5W0A0 696 aa11.7□□□□□ -0.54
SNCA-201ENST00000336904 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
SNCA-201ENST00000336904 FBLN1P23142 703 aa11.7□□□□□ -0.54
SNCA-201ENST00000336904 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
SNCA-201ENST00000336904 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
SNCA-201ENST00000336904 BLMP54132 1417 aaPredicted RBP11.69□□□□□ -0.54
SNCA-201ENST00000336904 KDM5AP29375 1690 aaKnown RBP11.69□□□□□ -0.54
SNCA-201ENST00000336904 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
SNCA-201ENST00000336904 SYNMO15061 1565 aa11.68□□□□□ -0.54
SNCA-201ENST00000336904 MYOM2P54296 1465 aa11.68□□□□□ -0.54
SNCA-201ENST00000336904 DIP2CQ9Y2E4 1556 aa11.68□□□□□ -0.54
SNCA-201ENST00000336904 PIK3C2GO75747 1445 aa11.68□□□□□ -0.54
SNCA-201ENST00000336904 BCAR3O75815 825 aa11.68□□□□□ -0.54
SNCA-201ENST00000336904 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
SNCA-201ENST00000336904 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
SNCA-201ENST00000336904 MTHFSP49914 203 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 PRAM1Q96QH2 718 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 CAMSAP1Q5T5Y3 1602 aa11.66□□□□□ -0.54
SNCA-201ENST00000336904 POGKQ9P215 609 aa11.65□□□□□ -0.54
SNCA-201ENST00000336904 VGFO15240 615 aaPredicted RBP11.65□□□□□ -0.54
SNCA-201ENST00000336904 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
SNCA-201ENST00000336904 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
SNCA-201ENST00000336904 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.55
SNCA-201ENST00000336904 ZMYM4Q5VZL5 1548 aa11.64□□□□□ -0.55
SNCA-201ENST00000336904 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
SNCA-201ENST00000336904 PPLO60437 1756 aa11.64□□□□□ -0.55
SNCA-201ENST00000336904 QRICH2Q9H0J4 1663 aa11.64□□□□□ -0.55
SNCA-201ENST00000336904 PPM1GO15355 546 aaPredicted RBP11.64□□□□□ -0.55
SNCA-201ENST00000336904 LMTK2Q8IWU2 1503 aa11.64□□□□□ -0.55
SNCA-201ENST00000336904 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
SNCA-201ENST00000336904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNCA-201ENST00000336904 ADGRB1O14514 1584 aa11.63□□□□□ -0.55
SNCA-201ENST00000336904 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
SNCA-201ENST00000336904 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
SNCA-201ENST00000336904 U2SURPO15042 1029 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms