RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
AP3S2-201ENST00000336418 HSP90B2PQ58FF3 399 aa14.05□□□□□ -0.16
AP3S2-201ENST00000336418 RRP12Q5JTH9 1297 aaKnown RBP14.05□□□□□ -0.16
AP3S2-201ENST00000336418 AK7Q96M32 723 aa14.05□□□□□ -0.16
AP3S2-201ENST00000336418 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
AP3S2-201ENST00000336418 RRP9O43818 475 aaKnown RBP14.04□□□□□ -0.16
AP3S2-201ENST00000336418 RDXP35241 583 aaKnown RBP14.04□□□□□ -0.16
AP3S2-201ENST00000336418 GGT6Q6P531 493 aa14.04□□□□□ -0.16
AP3S2-201ENST00000336418 AEBP1Q8IUX7 1158 aa14.04□□□□□ -0.16
AP3S2-201ENST00000336418 CCDC173Q0VFZ6 552 aa14.03□□□□□ -0.16
AP3S2-201ENST00000336418 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
AP3S2-201ENST00000336418 PDILTQ8N807 584 aa14.03□□□□□ -0.16
AP3S2-201ENST00000336418 PRPF40AO75400 957 aaKnown RBP14.03□□□□□ -0.16
AP3S2-201ENST00000336418 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
AP3S2-201ENST00000336418 LNPKQ9C0E8 428 aa14.02□□□□□ -0.16
AP3S2-201ENST00000336418 NUCB2P80303 420 aa14.02□□□□□ -0.17
AP3S2-201ENST00000336418 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
AP3S2-201ENST00000336418 APAF1O14727 1248 aa14.02□□□□□ -0.17
AP3S2-201ENST00000336418 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.17
AP3S2-201ENST00000336418 PANK1Q8TE04 598 aa14.02□□□□□ -0.17
AP3S2-201ENST00000336418 E9PSI1 815 aa14.01□□□□□ -0.17
AP3S2-201ENST00000336418 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
AP3S2-201ENST00000336418 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
AP3S2-201ENST00000336418 CGNL1Q0VF96 1302 aa14.01□□□□□ -0.17
AP3S2-201ENST00000336418 MARCH6O60337 910 aa14□□□□□ -0.17
AP3S2-201ENST00000336418 NAP1L1P55209 391 aaKnown RBP14□□□□□ -0.17
AP3S2-201ENST00000336418 CBX1P83916 185 aa14□□□□□ -0.17
AP3S2-201ENST00000336418 TSPY26PQ9H489 355 aa14□□□□□ -0.17
AP3S2-201ENST00000336418 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
AP3S2-201ENST00000336418 SMC3Q9UQE7 1217 aa14□□□□□ -0.17
AP3S2-201ENST00000336418 LEKR1Q6ZMV7 388 aa13.99□□□□□ -0.17
AP3S2-201ENST00000336418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.178e-7■■□□□ 13.6
AP3S2-201ENST00000336418 TRIM5Q9C035 493 aa13.99□□□□□ -0.17
AP3S2-201ENST00000336418 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
AP3S2-201ENST00000336418 KDM4AO75164 1064 aa13.99□□□□□ -0.17
AP3S2-201ENST00000336418 REC8O95072 547 aa13.99□□□□□ -0.17
AP3S2-201ENST00000336418 TDRD9Q8NDG6 1382 aaKnown RBP13.99□□□□□ -0.17
AP3S2-201ENST00000336418 CUX2O14529 1486 aa13.98□□□□□ -0.17
AP3S2-201ENST00000336418 ZHX1Q9UKY1 873 aaPredicted RBP13.98□□□□□ -0.17
AP3S2-201ENST00000336418 NUP155O75694 1391 aa13.98□□□□□ -0.17
AP3S2-201ENST00000336418 IPO7O95373 1038 aaKnown RBP13.97□□□□□ -0.17
AP3S2-201ENST00000336418 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 TRERF1Q96PN7 1200 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 CAGE1Q8TC20 777 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 ZMYND15Q9H091 742 aa13.97□□□□□ -0.17
AP3S2-201ENST00000336418 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.17
AP3S2-201ENST00000336418 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
AP3S2-201ENST00000336418 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.17
AP3S2-201ENST00000336418 SMC2O95347 1197 aa13.95□□□□□ -0.18
AP3S2-201ENST00000336418 KANK1Q14678 1352 aa13.95□□□□□ -0.18
AP3S2-201ENST00000336418 AXDND1Q5T1B0 1012 aaPredicted RBP13.94□□□□□ -0.18
AP3S2-201ENST00000336418 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
AP3S2-201ENST00000336418 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
AP3S2-201ENST00000336418 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
AP3S2-201ENST00000336418 ESPNB1AK53 854 aa13.94□□□□□ -0.18
AP3S2-201ENST00000336418 INTS3Q68E01 1043 aaKnown RBP13.94□□□□□ -0.18
AP3S2-201ENST00000336418 IBSPP21815 317 aaPredicted RBP13.94□□□□□ -0.18
AP3S2-201ENST00000336418 CCDC191Q8NCU4 936 aa13.94□□□□□ -0.18
AP3S2-201ENST00000336418 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
AP3S2-201ENST00000336418 CDCA7LQ96GN5 454 aa13.93□□□□□ -0.18
AP3S2-201ENST00000336418 CARMIL1Q5VZK9 1371 aa13.93□□□□□ -0.18
AP3S2-201ENST00000336418 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
AP3S2-201ENST00000336418 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
AP3S2-201ENST00000336418 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
AP3S2-201ENST00000336418 CCDC73Q6ZRK6 1079 aa13.92□□□□□ -0.18
AP3S2-201ENST00000336418 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
AP3S2-201ENST00000336418 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
AP3S2-201ENST00000336418 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
AP3S2-201ENST00000336418 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
AP3S2-201ENST00000336418 TRIM29Q14134 588 aa13.91□□□□□ -0.18
AP3S2-201ENST00000336418 FAM177A1Q8N128 213 aaPredicted RBP13.91□□□□□ -0.18
AP3S2-201ENST00000336418 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
AP3S2-201ENST00000336418 CSB-PGBD3P0DP91 1061 aa13.91□□□□□ -0.18
AP3S2-201ENST00000336418 RBM25P49756 843 aaKnown RBP13.9□□□□□ -0.18
AP3S2-201ENST00000336418 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
AP3S2-201ENST00000336418 EIF3AQ14152 1382 aaKnown RBP13.9□□□□□ -0.18
AP3S2-201ENST00000336418 CPLX1O14810 134 aa13.9□□□□□ -0.18
AP3S2-201ENST00000336418 BACH2Q9BYV9 841 aa13.9□□□□□ -0.18
AP3S2-201ENST00000336418 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
AP3S2-201ENST00000336418 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
AP3S2-201ENST00000336418 FIBPO43427 364 aa13.89□□□□□ -0.19
AP3S2-201ENST00000336418 AEBP2Q6ZN18 517 aaPredicted RBP13.89□□□□□ -0.19
AP3S2-201ENST00000336418 FAM193AP78312 1265 aa13.89□□□□□ -0.19
AP3S2-201ENST00000336418 CDR1P51861 262 aa13.89□□□□□ -0.19
AP3S2-201ENST00000336418 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
AP3S2-201ENST00000336418 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 CDC45O75419 566 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 ERCC4Q92889 916 aaPredicted RBP13.88□□□□□ -0.19
AP3S2-201ENST00000336418 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 RUFY2Q8WXA3 655 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 CENPHQ9H3R5 247 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
AP3S2-201ENST00000336418 BRPF1P55201 1214 aaPredicted RBP13.87□□□□□ -0.19
AP3S2-201ENST00000336418 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
AP3S2-201ENST00000336418 SYNE3Q6ZMZ3 975 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms