RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
LRAT-201ENST00000336356 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
LRAT-201ENST00000336356 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
LRAT-201ENST00000336356 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
LRAT-201ENST00000336356 PCF11O94913 1555 aaKnown RBP14.04□□□□□ -0.16
LRAT-201ENST00000336356 GPRASP1Q5JY77 1395 aa14.04□□□□□ -0.16
LRAT-201ENST00000336356 PIP4K2BP78356 416 aa14.03□□□□□ -0.16
LRAT-201ENST00000336356 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
LRAT-201ENST00000336356 ABCA8O94911 1581 aa14.03□□□□□ -0.16
LRAT-201ENST00000336356 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
LRAT-201ENST00000336356 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.16
LRAT-201ENST00000336356 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.16
LRAT-201ENST00000336356 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.17
LRAT-201ENST00000336356 PTMSP20962 102 aa14.02□□□□□ -0.17
LRAT-201ENST00000336356 DAPK1P53355 1430 aa14.02□□□□□ -0.17
LRAT-201ENST00000336356 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
LRAT-201ENST00000336356 CEBPAP49715 358 aaPredicted RBP14.02□□□□□ -0.17
LRAT-201ENST00000336356 EVA1CP58658 441 aa14.01□□□□□ -0.17
LRAT-201ENST00000336356 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
LRAT-201ENST00000336356 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
LRAT-201ENST00000336356 RALBP1Q15311 655 aa14.01□□□□□ -0.17
LRAT-201ENST00000336356 MSH6P52701 1360 aa14□□□□□ -0.17
LRAT-201ENST00000336356 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
LRAT-201ENST00000336356 RRP1P56182 461 aaKnown RBP14□□□□□ -0.17
LRAT-201ENST00000336356 FAM161AQ3B820 660 aa14□□□□□ -0.17
LRAT-201ENST00000336356 ZMYM3Q14202 1370 aa13.99□□□□□ -0.17
LRAT-201ENST00000336356 DNTTIP2Q5QJE6 756 aaKnown RBP13.99□□□□□ -0.17
LRAT-201ENST00000336356 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
LRAT-201ENST00000336356 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
LRAT-201ENST00000336356 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
LRAT-201ENST00000336356 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
LRAT-201ENST00000336356 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
LRAT-201ENST00000336356 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
LRAT-201ENST00000336356 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
LRAT-201ENST00000336356 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
LRAT-201ENST00000336356 SAMD9Q5K651 1589 aa13.97□□□□□ -0.17
LRAT-201ENST00000336356 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
LRAT-201ENST00000336356 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
LRAT-201ENST00000336356 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
LRAT-201ENST00000336356 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
LRAT-201ENST00000336356 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
LRAT-201ENST00000336356 CHMP4AQ9BY43 222 aa13.95□□□□□ -0.18
LRAT-201ENST00000336356 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
LRAT-201ENST00000336356 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
LRAT-201ENST00000336356 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
LRAT-201ENST00000336356 ZCCHC11Q5TAX3 1644 aaKnown RBP13.95□□□□□ -0.18
LRAT-201ENST00000336356 ARAP3Q8WWN8 1544 aa13.94□□□□□ -0.18
LRAT-201ENST00000336356 SLC4A3P48751 1232 aa13.94□□□□□ -0.18
LRAT-201ENST00000336356 HSP90AB1P08238 724 aaKnown RBP13.94□□□□□ -0.18
LRAT-201ENST00000336356 CFAP43Q8NDM7 1665 aa13.93□□□□□ -0.18
LRAT-201ENST00000336356 GLI2P10070 1586 aa13.93□□□□□ -0.18
LRAT-201ENST00000336356 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
LRAT-201ENST00000336356 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
LRAT-201ENST00000336356 HSPA2P54652 639 aa13.91□□□□□ -0.18
LRAT-201ENST00000336356 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
LRAT-201ENST00000336356 MLH3Q9UHC1 1453 aa13.91□□□□□ -0.18
LRAT-201ENST00000336356 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 BACH2Q9BYV9 841 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 TRAK1Q9UPV9 953 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
LRAT-201ENST00000336356 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
LRAT-201ENST00000336356 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
LRAT-201ENST00000336356 DDX11L8A8MPP1 907 aa13.89□□□□□ -0.19
LRAT-201ENST00000336356 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
LRAT-201ENST00000336356 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
LRAT-201ENST00000336356 NPHP1O15259 732 aa13.87□□□□□ -0.19
LRAT-201ENST00000336356 C11orf95C9JLR9 678 aaPredicted RBP13.87□□□□□ -0.19
LRAT-201ENST00000336356 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 ABCC5O15440 1437 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
LRAT-201ENST00000336356 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
LRAT-201ENST00000336356 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 MYO5CQ9NQX4 1742 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
LRAT-201ENST00000336356 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
LRAT-201ENST00000336356 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
LRAT-201ENST00000336356 AMPHP49418 695 aa13.85□□□□□ -0.19
LRAT-201ENST00000336356 IDI1Q13907 227 aa13.85□□□□□ -0.19
LRAT-201ENST00000336356 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
LRAT-201ENST00000336356 MAP7D2Q96T17 732 aa13.85□□□□□ -0.19
LRAT-201ENST00000336356 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
LRAT-201ENST00000336356 CHAF1AQ13111 956 aaPredicted RBP13.85□□□□□ -0.19
LRAT-201ENST00000336356 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
LRAT-201ENST00000336356 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
LRAT-201ENST00000336356 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
LRAT-201ENST00000336356 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
LRAT-201ENST00000336356 TPM2P07951 284 aa13.83□□□□□ -0.19
LRAT-201ENST00000336356 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
LRAT-201ENST00000336356 ADCY10Q96PN6 1610 aa13.83□□□□□ -0.2
LRAT-201ENST00000336356 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
LRAT-201ENST00000336356 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
LRAT-201ENST00000336356 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
LRAT-201ENST00000336356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.83□□□□□ -0.2
LRAT-201ENST00000336356 MRE11P49959 708 aa13.82□□□□□ -0.2
LRAT-201ENST00000336356 SKOR2Q2VWA4 1001 aaPredicted RBP13.82□□□□□ -0.2
LRAT-201ENST00000336356 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
LRAT-201ENST00000336356 COG3Q96JB2 828 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms