RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 RGS12O14924 1447 aa18.61■□□□□ 0.57
LCE4A-201ENST00000335535 CHD2O14647 1828 aaKnown RBP18.6■□□□□ 0.57
LCE4A-201ENST00000335535 APLP2Q06481 763 aa18.6■□□□□ 0.57
LCE4A-201ENST00000335535 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
LCE4A-201ENST00000335535 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
LCE4A-201ENST00000335535 IDI1Q13907 227 aa18.58■□□□□ 0.56
LCE4A-201ENST00000335535 LMTK2Q8IWU2 1503 aa18.57■□□□□ 0.56
LCE4A-201ENST00000335535 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
LCE4A-201ENST00000335535 AFF2P51816 1311 aa18.56■□□□□ 0.56
LCE4A-201ENST00000335535 NOS1P29475 1434 aa18.54■□□□□ 0.56
LCE4A-201ENST00000335535 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
LCE4A-201ENST00000335535 PLEKHG1Q9ULL1 1385 aa18.54■□□□□ 0.56
LCE4A-201ENST00000335535 ZFYVE9O95405 1425 aa18.53■□□□□ 0.56
LCE4A-201ENST00000335535 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
LCE4A-201ENST00000335535 CADPS2Q86UW7 1296 aa18.53■□□□□ 0.56
LCE4A-201ENST00000335535 SETD5Q9C0A6 1442 aa18.52■□□□□ 0.56
LCE4A-201ENST00000335535 FOXD1Q16676 465 aa18.51■□□□□ 0.55
LCE4A-201ENST00000335535 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
LCE4A-201ENST00000335535 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
LCE4A-201ENST00000335535 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
LCE4A-201ENST00000335535 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
LCE4A-201ENST00000335535 SETBP1Q9Y6X0 1596 aa18.49■□□□□ 0.55
LCE4A-201ENST00000335535 KANK1Q14678 1352 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
LCE4A-201ENST00000335535 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
LCE4A-201ENST00000335535 BRINP3Q76B58 766 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 NUTM2AQ8IVF1 878 aaPredicted RBP18.48■□□□□ 0.55
LCE4A-201ENST00000335535 QTRT2Q9H974 415 aaKnown RBP18.48■□□□□ 0.55
LCE4A-201ENST00000335535 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 EP400Q96L91 3159 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 MYOM3Q5VTT5 1437 aa18.48■□□□□ 0.55
LCE4A-201ENST00000335535 NHSL1Q5SYE7 1610 aa18.46■□□□□ 0.55
LCE4A-201ENST00000335535 ASXL1Q8IXJ9 1541 aa18.46■□□□□ 0.55
LCE4A-201ENST00000335535 ATF3P18847 181 aa18.46■□□□□ 0.55
LCE4A-201ENST00000335535 DCCP43146 1447 aa18.46■□□□□ 0.55
LCE4A-201ENST00000335535 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
LCE4A-201ENST00000335535 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
LCE4A-201ENST00000335535 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
LCE4A-201ENST00000335535 BCANQ96GW7 911 aa18.44■□□□□ 0.54
LCE4A-201ENST00000335535 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
LCE4A-201ENST00000335535 ADAMTS13Q76LX8 1427 aa18.43■□□□□ 0.54
LCE4A-201ENST00000335535 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
LCE4A-201ENST00000335535 C14orf37Q86TY3 774 aa18.42■□□□□ 0.54
LCE4A-201ENST00000335535 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
LCE4A-201ENST00000335535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
LCE4A-201ENST00000335535 C8orf37Q96NL8 207 aa18.41■□□□□ 0.54
LCE4A-201ENST00000335535 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
LCE4A-201ENST00000335535 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
LCE4A-201ENST00000335535 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
LCE4A-201ENST00000335535 TMEM131LA2VDJ0 1609 aa18.4■□□□□ 0.54
LCE4A-201ENST00000335535 PNPLA6Q8IY17 1366 aa18.4■□□□□ 0.54
LCE4A-201ENST00000335535 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.53
LCE4A-201ENST00000335535 ABCC5O15440 1437 aa18.39■□□□□ 0.53
LCE4A-201ENST00000335535 CCDC125Q86Z20 511 aa18.38■□□□□ 0.53
LCE4A-201ENST00000335535 MST1RQ04912 1400 aa18.38■□□□□ 0.53
LCE4A-201ENST00000335535 GCC2Q8IWJ2 1684 aa18.38■□□□□ 0.53
LCE4A-201ENST00000335535 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
LCE4A-201ENST00000335535 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
LCE4A-201ENST00000335535 RRBP1Q9P2E9 1410 aaKnown RBP18.37■□□□□ 0.53
LCE4A-201ENST00000335535 LRP5O75197 1615 aa18.35■□□□□ 0.53
LCE4A-201ENST00000335535 TRPM2O94759 1503 aa18.35■□□□□ 0.53
LCE4A-201ENST00000335535 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.34■□□□□ 0.53
LCE4A-201ENST00000335535 PTPRUQ92729 1446 aa18.33■□□□□ 0.53
LCE4A-201ENST00000335535 ATRNO75882 1429 aa18.32■□□□□ 0.52
LCE4A-201ENST00000335535 LAMC1P11047 1609 aa18.32■□□□□ 0.52
LCE4A-201ENST00000335535 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
LCE4A-201ENST00000335535 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
LCE4A-201ENST00000335535 DAPK1P53355 1430 aa18.31■□□□□ 0.52
LCE4A-201ENST00000335535 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
LCE4A-201ENST00000335535 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
LCE4A-201ENST00000335535 AMOTL2Q9Y2J4 779 aa18.3■□□□□ 0.52
LCE4A-201ENST00000335535 USP21Q9UK80 565 aa18.29■□□□□ 0.52
LCE4A-201ENST00000335535 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
LCE4A-201ENST00000335535 UNC13BO14795 1591 aa18.28■□□□□ 0.52
LCE4A-201ENST00000335535 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
LCE4A-201ENST00000335535 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
LCE4A-201ENST00000335535 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
LCE4A-201ENST00000335535 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
LCE4A-201ENST00000335535 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
LCE4A-201ENST00000335535 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
LCE4A-201ENST00000335535 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
LCE4A-201ENST00000335535 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
LCE4A-201ENST00000335535 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
LCE4A-201ENST00000335535 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
LCE4A-201ENST00000335535 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
LCE4A-201ENST00000335535 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
LCE4A-201ENST00000335535 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
LCE4A-201ENST00000335535 MYOM2P54296 1465 aa18.18■□□□□ 0.5
LCE4A-201ENST00000335535 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
LCE4A-201ENST00000335535 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
LCE4A-201ENST00000335535 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
LCE4A-201ENST00000335535 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
LCE4A-201ENST00000335535 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
LCE4A-201ENST00000335535 E9PCH4 1651 aa18.14■□□□□ 0.49
LCE4A-201ENST00000335535 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
LCE4A-201ENST00000335535 METP08581 1390 aa18.14■□□□□ 0.49
LCE4A-201ENST00000335535 ANKRD50Q9ULJ7 1429 aa18.14■□□□□ 0.49
LCE4A-201ENST00000335535 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
LCE4A-201ENST00000335535 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms