RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GPATCH3Q96I76 525 aa18.84■□□□□ 0.61
C9orf47-201ENST00000334490 TIAM1Q13009 1591 aa18.84■□□□□ 0.61
C9orf47-201ENST00000334490 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
C9orf47-201ENST00000334490 HMOX1P09601 288 aa18.84■□□□□ 0.61
C9orf47-201ENST00000334490 TRIM6-TRIM34B2RNG4 842 aa18.84■□□□□ 0.61
C9orf47-201ENST00000334490 DAPK1P53355 1430 aa18.83■□□□□ 0.61
C9orf47-201ENST00000334490 ARHGEF11O15085 1522 aa18.83■□□□□ 0.61
C9orf47-201ENST00000334490 ANKLE2Q86XL3 938 aa18.83■□□□□ 0.61
C9orf47-201ENST00000334490 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.6
C9orf47-201ENST00000334490 ABTB2Q8N961 1025 aa18.83■□□□□ 0.6
C9orf47-201ENST00000334490 G3V3G9 751 aa18.83■□□□□ 0.6
C9orf47-201ENST00000334490 DCAF8Q5TAQ9 597 aa18.83■□□□□ 0.6
C9orf47-201ENST00000334490 MSH5O43196 834 aa18.81■□□□□ 0.6
C9orf47-201ENST00000334490 GOLGA6L4A6NEF3 574 aa18.81■□□□□ 0.6
C9orf47-201ENST00000334490 SPRYD3Q8NCJ5 442 aa18.81■□□□□ 0.6
C9orf47-201ENST00000334490 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
C9orf47-201ENST00000334490 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
C9orf47-201ENST00000334490 TRIM44Q96DX7 344 aaPredicted RBP18.81■□□□□ 0.6
C9orf47-201ENST00000334490 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
C9orf47-201ENST00000334490 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
C9orf47-201ENST00000334490 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
C9orf47-201ENST00000334490 NEXNQ0ZGT2 675 aa18.79■□□□□ 0.6
C9orf47-201ENST00000334490 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
C9orf47-201ENST00000334490 MTHFSP49914 203 aa18.78■□□□□ 0.6
C9orf47-201ENST00000334490 PLIN1O60240 522 aa18.78■□□□□ 0.6
C9orf47-201ENST00000334490 PTMAP06454 111 aaKnown RBP18.77■□□□□ 0.6
C9orf47-201ENST00000334490 CUL7Q14999 1698 aa18.77■□□□□ 0.6
C9orf47-201ENST00000334490 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
C9orf47-201ENST00000334490 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
C9orf47-201ENST00000334490 NBPF8Q3BBV2 869 aa18.76■□□□□ 0.59
C9orf47-201ENST00000334490 PLCB2Q00722 1185 aa18.76■□□□□ 0.59
C9orf47-201ENST00000334490 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
C9orf47-201ENST00000334490 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
C9orf47-201ENST00000334490 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
C9orf47-201ENST00000334490 CDK19Q9BWU1 502 aa18.75■□□□□ 0.59
C9orf47-201ENST00000334490 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
C9orf47-201ENST00000334490 C9orf78Q9NZ63 289 aaPredicted RBP18.74■□□□□ 0.59
C9orf47-201ENST00000334490 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
C9orf47-201ENST00000334490 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
C9orf47-201ENST00000334490 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
C9orf47-201ENST00000334490 GNL2Q13823 731 aaKnown RBP18.74■□□□□ 0.59
C9orf47-201ENST00000334490 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
C9orf47-201ENST00000334490 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
C9orf47-201ENST00000334490 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
C9orf47-201ENST00000334490 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
C9orf47-201ENST00000334490 GNAI1P63096 354 aa18.72■□□□□ 0.59
C9orf47-201ENST00000334490 FKBP5Q13451 457 aaPredicted RBP18.72■□□□□ 0.59
C9orf47-201ENST00000334490 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
C9orf47-201ENST00000334490 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
C9orf47-201ENST00000334490 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
C9orf47-201ENST00000334490 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
C9orf47-201ENST00000334490 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
C9orf47-201ENST00000334490 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
C9orf47-201ENST00000334490 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
C9orf47-201ENST00000334490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.69■□□□□ 0.58
C9orf47-201ENST00000334490 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
C9orf47-201ENST00000334490 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
C9orf47-201ENST00000334490 ROCK1Q13464 1354 aa18.68■□□□□ 0.58
C9orf47-201ENST00000334490 RRP1P56182 461 aaKnown RBP18.68■□□□□ 0.58
C9orf47-201ENST00000334490 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
C9orf47-201ENST00000334490 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
C9orf47-201ENST00000334490 NAIPQ13075 1403 aa18.67■□□□□ 0.58
C9orf47-201ENST00000334490 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
C9orf47-201ENST00000334490 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
C9orf47-201ENST00000334490 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
C9orf47-201ENST00000334490 PPP2R1AP30153 589 aa18.65■□□□□ 0.58
C9orf47-201ENST00000334490 CRBNQ96SW2 442 aa18.65■□□□□ 0.58
C9orf47-201ENST00000334490 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
C9orf47-201ENST00000334490 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
C9orf47-201ENST00000334490 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
C9orf47-201ENST00000334490 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
C9orf47-201ENST00000334490 PRKAR2BP31323 418 aa18.64■□□□□ 0.57
C9orf47-201ENST00000334490 CEBPAP49715 358 aaPredicted RBP18.64■□□□□ 0.57
C9orf47-201ENST00000334490 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
C9orf47-201ENST00000334490 RILPL2Q969X0 211 aa18.64■□□□□ 0.57
C9orf47-201ENST00000334490 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
C9orf47-201ENST00000334490 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
C9orf47-201ENST00000334490 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
C9orf47-201ENST00000334490 ABCC5O15440 1437 aa18.62■□□□□ 0.57
C9orf47-201ENST00000334490 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
C9orf47-201ENST00000334490 CENPQQ7L2Z9 268 aaPredicted RBP18.61■□□□□ 0.57
C9orf47-201ENST00000334490 KIF14Q15058 1648 aa18.61■□□□□ 0.57
C9orf47-201ENST00000334490 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
C9orf47-201ENST00000334490 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
C9orf47-201ENST00000334490 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
C9orf47-201ENST00000334490 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
C9orf47-201ENST00000334490 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
C9orf47-201ENST00000334490 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
C9orf47-201ENST00000334490 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
C9orf47-201ENST00000334490 IDI1Q13907 227 aa18.59■□□□□ 0.57
C9orf47-201ENST00000334490 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
C9orf47-201ENST00000334490 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
C9orf47-201ENST00000334490 FANCAO15360 1455 aa18.59■□□□□ 0.57
C9orf47-201ENST00000334490 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.57
C9orf47-201ENST00000334490 PIP4K2BP78356 416 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms