RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 AGLP35573 1532 aa12.5□□□□□ -0.41
TREM1-202ENST00000334475 TET3O43151 1660 aa12.49□□□□□ -0.41
TREM1-202ENST00000334475 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
TREM1-202ENST00000334475 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
TREM1-202ENST00000334475 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
TREM1-202ENST00000334475 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
TREM1-202ENST00000334475 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
TREM1-202ENST00000334475 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
TREM1-202ENST00000334475 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
TREM1-202ENST00000334475 CEP152O94986 1710 aa12.47□□□□□ -0.41
TREM1-202ENST00000334475 SPHKAPQ2M3C7 1700 aa12.47□□□□□ -0.41
TREM1-202ENST00000334475 CAMSAP1Q5T5Y3 1602 aa12.47□□□□□ -0.41
TREM1-202ENST00000334475 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
TREM1-202ENST00000334475 NEURL4Q96JN8 1562 aa12.47□□□□□ -0.41
TREM1-202ENST00000334475 E9PCH4 1651 aa12.46□□□□□ -0.41
TREM1-202ENST00000334475 USP47Q96K76 1375 aa12.45□□□□□ -0.42
TREM1-202ENST00000334475 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
TREM1-202ENST00000334475 TRPM2O94759 1503 aa12.45□□□□□ -0.42
TREM1-202ENST00000334475 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
TREM1-202ENST00000334475 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
TREM1-202ENST00000334475 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
TREM1-202ENST00000334475 RNF17Q9BXT8 1623 aaKnown RBP12.43□□□□□ -0.42
TREM1-202ENST00000334475 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
TREM1-202ENST00000334475 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
TREM1-202ENST00000334475 CLTCQ00610 1675 aaKnown RBP12.42□□□□□ -0.42
TREM1-202ENST00000334475 A2MP01023 1474 aa12.41□□□□□ -0.42
TREM1-202ENST00000334475 KANK1Q14678 1352 aa12.41□□□□□ -0.42
TREM1-202ENST00000334475 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
TREM1-202ENST00000334475 MROH1Q8NDA8 1641 aa12.4□□□□□ -0.42
TREM1-202ENST00000334475 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.42
TREM1-202ENST00000334475 KIF7Q2M1P5 1343 aa12.4□□□□□ -0.42
TREM1-202ENST00000334475 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
TREM1-202ENST00000334475 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
TREM1-202ENST00000334475 DHX29Q7Z478 1369 aaKnown RBP12.4□□□□□ -0.42
TREM1-202ENST00000334475 NPATQ14207 1427 aa12.39□□□□□ -0.43
TREM1-202ENST00000334475 LMTK2Q8IWU2 1503 aa12.39□□□□□ -0.43
TREM1-202ENST00000334475 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
TREM1-202ENST00000334475 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
TREM1-202ENST00000334475 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
TREM1-202ENST00000334475 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
TREM1-202ENST00000334475 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
TREM1-202ENST00000334475 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
TREM1-202ENST00000334475 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
TREM1-202ENST00000334475 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
TREM1-202ENST00000334475 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
TREM1-202ENST00000334475 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
TREM1-202ENST00000334475 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
TREM1-202ENST00000334475 KIF1BO60333 1816 aa12.36□□□□□ -0.43
TREM1-202ENST00000334475 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
TREM1-202ENST00000334475 HSPA1LP34931 641 aa12.34□□□□□ -0.43
TREM1-202ENST00000334475 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
TREM1-202ENST00000334475 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
TREM1-202ENST00000334475 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
TREM1-202ENST00000334475 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
TREM1-202ENST00000334475 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
TREM1-202ENST00000334475 IFT172Q9UG01 1749 aa12.33□□□□□ -0.44
TREM1-202ENST00000334475 GGT6Q6P531 493 aa12.32□□□□□ -0.44
TREM1-202ENST00000334475 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
TREM1-202ENST00000334475 MED1Q15648 1581 aaPredicted RBP12.31□□□□□ -0.44
TREM1-202ENST00000334475 MYOM2P54296 1465 aa12.3□□□□□ -0.44
TREM1-202ENST00000334475 KDM2AQ9Y2K7 1162 aa12.3□□□□□ -0.44
TREM1-202ENST00000334475 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
TREM1-202ENST00000334475 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
TREM1-202ENST00000334475 KIF3BO15066 747 aa12.28□□□□□ -0.44
TREM1-202ENST00000334475 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
TREM1-202ENST00000334475 STRCP1A6NGW2 1772 aa12.28□□□□□ -0.44
TREM1-202ENST00000334475 ST20-MTHFSA0A0A6YYL1 179 aa12.26□□□□□ -0.45
TREM1-202ENST00000334475 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
TREM1-202ENST00000334475 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
TREM1-202ENST00000334475 ABCC3O15438 1527 aa12.24□□□□□ -0.45
TREM1-202ENST00000334475 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
TREM1-202ENST00000334475 SCAF11Q99590 1463 aaKnown RBP12.24□□□□□ -0.45
TREM1-202ENST00000334475 NRXN1Q9ULB1 1477 aa12.23□□□□□ -0.45
TREM1-202ENST00000334475 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
TREM1-202ENST00000334475 MRS2Q9HD23 443 aa12.23□□□□□ -0.45
TREM1-202ENST00000334475 SUPT16HQ9Y5B9 1047 aaKnown RBP12.23□□□□□ -0.45
TREM1-202ENST00000334475 PPLO60437 1756 aa12.23□□□□□ -0.45
TREM1-202ENST00000334475 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
TREM1-202ENST00000334475 TNRQ92752 1358 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 RALBP1Q15311 655 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 SYNMO15061 1565 aa12.22□□□□□ -0.45
TREM1-202ENST00000334475 TMF1P82094 1093 aa12.21□□□□□ -0.45
TREM1-202ENST00000334475 HNRNPUQ00839 825 aaKnown RBP eCLIP12.21□□□□□ -0.45
TREM1-202ENST00000334475 NBPF1Q3BBV0 1214 aa12.21□□□□□ -0.45
TREM1-202ENST00000334475 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
TREM1-202ENST00000334475 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
TREM1-202ENST00000334475 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
TREM1-202ENST00000334475 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
TREM1-202ENST00000334475 NEFLP07196 543 aa12.2□□□□□ -0.46
TREM1-202ENST00000334475 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
TREM1-202ENST00000334475 CPS1P31327 1500 aa12.2□□□□□ -0.46
TREM1-202ENST00000334475 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
TREM1-202ENST00000334475 TESK2Q96S53 571 aa12.19□□□□□ -0.46
TREM1-202ENST00000334475 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
TREM1-202ENST00000334475 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
TREM1-202ENST00000334475 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms