RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
UPK3B-202ENST00000334348 PRDM15P57071 1507 aaPredicted RBP21.09■□□□□ 0.97
UPK3B-202ENST00000334348 GOLGA2Q08379 1002 aa21.08■□□□□ 0.96
UPK3B-202ENST00000334348 RGS3P49796 1198 aa21.07■□□□□ 0.96
UPK3B-202ENST00000334348 CCDC144AA2RUR9 1427 aa21.07■□□□□ 0.96
UPK3B-202ENST00000334348 TSPOAP1O95153 1857 aa21.07■□□□□ 0.96
UPK3B-202ENST00000334348 TMF1P82094 1093 aa21.06■□□□□ 0.96
UPK3B-202ENST00000334348 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
UPK3B-202ENST00000334348 FAM135AQ9P2D6 1515 aa21.05■□□□□ 0.96
UPK3B-202ENST00000334348 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
UPK3B-202ENST00000334348 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
UPK3B-202ENST00000334348 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
UPK3B-202ENST00000334348 SLFN5Q08AF3 891 aa21.03■□□□□ 0.96
UPK3B-202ENST00000334348 A2MP01023 1474 aa21.02■□□□□ 0.96
UPK3B-202ENST00000334348 USP19O94966 1318 aa21.01■□□□□ 0.95
UPK3B-202ENST00000334348 PPP2R1AP30153 589 aa21.01■□□□□ 0.95
UPK3B-202ENST00000334348 RGL3Q3MIN7 710 aa21.01■□□□□ 0.95
UPK3B-202ENST00000334348 TRMT2AQ8IZ69 625 aaKnown RBP21.01■□□□□ 0.95
UPK3B-202ENST00000334348 PREX2Q70Z35 1606 aa20.99■□□□□ 0.95
UPK3B-202ENST00000334348 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
UPK3B-202ENST00000334348 CDC42BPBQ9Y5S2 1711 aa20.99■□□□□ 0.95
UPK3B-202ENST00000334348 GLI2P10070 1586 aa20.99■□□□□ 0.95
UPK3B-202ENST00000334348 ARHGEF5Q12774 1597 aa20.99■□□□□ 0.95
UPK3B-202ENST00000334348 PLCH2O75038 1416 aa20.98■□□□□ 0.95
UPK3B-202ENST00000334348 PLA2R1Q13018 1463 aa20.98■□□□□ 0.95
UPK3B-202ENST00000334348 EIF2AK4Q9P2K8 1649 aaKnown RBP20.97■□□□□ 0.95
UPK3B-202ENST00000334348 BECN1Q14457 450 aa20.97■□□□□ 0.95
UPK3B-202ENST00000334348 POGKQ9P215 609 aa20.97■□□□□ 0.95
UPK3B-202ENST00000334348 ARHGAP5Q13017 1502 aa20.97■□□□□ 0.95
UPK3B-202ENST00000334348 L1TD1Q5T7N2 865 aaKnown RBP20.96■□□□□ 0.95
UPK3B-202ENST00000334348 KNSTRNQ9Y448 316 aa20.96■□□□□ 0.95
UPK3B-202ENST00000334348 MAGI2Q86UL8 1455 aa20.96■□□□□ 0.95
UPK3B-202ENST00000334348 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.95
UPK3B-202ENST00000334348 HNRNPMP52272 730 aaKnown RBP eCLIP20.95■□□□□ 0.94
UPK3B-202ENST00000334348 CCDC141Q6ZP82 1450 aa20.95■□□□□ 0.94
UPK3B-202ENST00000334348 PPRC1Q5VV67 1664 aaKnown RBP20.95■□□□□ 0.94
UPK3B-202ENST00000334348 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
UPK3B-202ENST00000334348 AMER1Q5JTC6 1135 aaPredicted RBP20.94■□□□□ 0.94
UPK3B-202ENST00000334348 FANCAO15360 1455 aa20.93■□□□□ 0.94
UPK3B-202ENST00000334348 MAPK8IP3Q9UPT6 1336 aa20.93■□□□□ 0.94
UPK3B-202ENST00000334348 VIRMAQ69YN4 1812 aaKnown RBP20.93■□□□□ 0.94
UPK3B-202ENST00000334348 IGHDP01880 384 aa20.93■□□□□ 0.94
UPK3B-202ENST00000334348 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
UPK3B-202ENST00000334348 SAMD9LQ8IVG5 1584 aa20.92■□□□□ 0.94
UPK3B-202ENST00000334348 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
UPK3B-202ENST00000334348 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
UPK3B-202ENST00000334348 BCAR3O75815 825 aa20.9■□□□□ 0.94
UPK3B-202ENST00000334348 RRAGDQ9NQL2 400 aaPredicted RBP20.9■□□□□ 0.94
UPK3B-202ENST00000334348 SEC24BO95487 1268 aa20.89■□□□□ 0.94
UPK3B-202ENST00000334348 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.94
UPK3B-202ENST00000334348 PDE3AQ14432 1141 aa20.89■□□□□ 0.93
UPK3B-202ENST00000334348 RSPH4AQ5TD94 716 aa20.89■□□□□ 0.93
UPK3B-202ENST00000334348 ANTXR1Q9H6X2 564 aa20.89■□□□□ 0.93
UPK3B-202ENST00000334348 E9PSI1 815 aa20.88■□□□□ 0.93
UPK3B-202ENST00000334348 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
UPK3B-202ENST00000334348 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
UPK3B-202ENST00000334348 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
UPK3B-202ENST00000334348 AFAP1Q8N556 730 aa20.87■□□□□ 0.93
UPK3B-202ENST00000334348 UNC13BO14795 1591 aa20.86■□□□□ 0.93
UPK3B-202ENST00000334348 SLKQ9H2G2 1235 aaPredicted RBP20.86■□□□□ 0.93
UPK3B-202ENST00000334348 RNF17Q9BXT8 1623 aaKnown RBP20.86■□□□□ 0.93
UPK3B-202ENST00000334348 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
UPK3B-202ENST00000334348 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 ASXL1Q8IXJ9 1541 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 CDCA8Q53HL2 280 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 CCDC146Q8IYE0 955 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 NGEFQ8N5V2 710 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 ATP10AO60312 1499 aa20.85■□□□□ 0.93
UPK3B-202ENST00000334348 SYCP2Q9BX26 1530 aa20.84■□□□□ 0.93
UPK3B-202ENST00000334348 APAF1O14727 1248 aa20.84■□□□□ 0.93
UPK3B-202ENST00000334348 SCAPERQ9BY12 1400 aa20.83■□□□□ 0.93
UPK3B-202ENST00000334348 ADGRL1O94910 1474 aa20.83■□□□□ 0.93
UPK3B-202ENST00000334348 SYNMO15061 1565 aa20.83■□□□□ 0.93
UPK3B-202ENST00000334348 ZMYM3Q14202 1370 aa20.82■□□□□ 0.92
UPK3B-202ENST00000334348 TRAPPC8Q9Y2L5 1435 aa20.81■□□□□ 0.92
UPK3B-202ENST00000334348 TBC1D32Q96NH3 1257 aa20.8■□□□□ 0.92
UPK3B-202ENST00000334348 UPF2Q9HAU5 1272 aaKnown RBP20.8■□□□□ 0.92
UPK3B-202ENST00000334348 ARAP3Q8WWN8 1544 aa20.8■□□□□ 0.92
UPK3B-202ENST00000334348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
UPK3B-202ENST00000334348 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
UPK3B-202ENST00000334348 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
UPK3B-202ENST00000334348 AAMPQ13685 434 aa20.79■□□□□ 0.92
UPK3B-202ENST00000334348 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
UPK3B-202ENST00000334348 ABCC1P33527 1531 aa20.78■□□□□ 0.92
UPK3B-202ENST00000334348 GOLGA6L3A6NEY3 463 aa20.78■□□□□ 0.92
UPK3B-202ENST00000334348 XRCC6P12956 609 aaKnown RBP eCLIP20.78■□□□□ 0.92
UPK3B-202ENST00000334348 TBC1D2Q9BYX2 928 aa20.78■□□□□ 0.92
UPK3B-202ENST00000334348 COG6Q9Y2V7 657 aa20.78■□□□□ 0.92
UPK3B-202ENST00000334348 NEO1Q92859 1461 aa20.77■□□□□ 0.92
UPK3B-202ENST00000334348 PLXNC1O60486 1568 aa20.77■□□□□ 0.92
UPK3B-202ENST00000334348 MAST1Q9Y2H9 1570 aa20.77■□□□□ 0.92
UPK3B-202ENST00000334348 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.91
UPK3B-202ENST00000334348 PANK1Q8TE04 598 aa20.77■□□□□ 0.91
UPK3B-202ENST00000334348 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
UPK3B-202ENST00000334348 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
UPK3B-202ENST00000334348 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
UPK3B-202ENST00000334348 CLCN1P35523 988 aa20.74■□□□□ 0.91
UPK3B-202ENST00000334348 MCM4P33991 863 aa20.73■□□□□ 0.91
UPK3B-202ENST00000334348 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
UPK3B-202ENST00000334348 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms