RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 KIDINS220Q9ULH0 1771 aa25.25■■□□□ 1.63
RFTN1-201ENST00000334133 CD109Q6YHK3 1445 aa25.25■■□□□ 1.63
RFTN1-201ENST00000334133 PPP2R1AP30153 589 aa25.25■■□□□ 1.63
RFTN1-201ENST00000334133 IQGAP1P46940 1657 aa25.25■■□□□ 1.63
RFTN1-201ENST00000334133 AMER1Q5JTC6 1135 aaPredicted RBP25.24■■□□□ 1.63
RFTN1-201ENST00000334133 VWDEQ8N2E2 1590 aa25.24■■□□□ 1.63
RFTN1-201ENST00000334133 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
RFTN1-201ENST00000334133 EXOC6Q8TAG9 804 aa25.23■■□□□ 1.63
RFTN1-201ENST00000334133 PLIN1O60240 522 aa25.23■■□□□ 1.63
RFTN1-201ENST00000334133 CDCA8Q53HL2 280 aa25.2■■□□□ 1.63
RFTN1-201ENST00000334133 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.63
RFTN1-201ENST00000334133 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
RFTN1-201ENST00000334133 TMEM132EQ6IEE7 984 aa25.19■■□□□ 1.62
RFTN1-201ENST00000334133 PPRC1Q5VV67 1664 aaKnown RBP25.18■■□□□ 1.62
RFTN1-201ENST00000334133 WDR43Q15061 677 aaKnown RBP eCLIP25.18■■□□□ 1.62
RFTN1-201ENST00000334133 NOS1P29475 1434 aa25.17■■□□□ 1.62
RFTN1-201ENST00000334133 STAC3Q96MF2 364 aa25.17■■□□□ 1.62
RFTN1-201ENST00000334133 EIF3AQ14152 1382 aaKnown RBP25.17■■□□□ 1.62
RFTN1-201ENST00000334133 EFCAB6Q5THR3 1501 aa25.16■■□□□ 1.62
RFTN1-201ENST00000334133 CCDC146Q8IYE0 955 aa25.16■■□□□ 1.62
RFTN1-201ENST00000334133 MYT1Q01538 1121 aa25.14■■□□□ 1.62
RFTN1-201ENST00000334133 ABCA6Q8N139 1617 aa25.14■■□□□ 1.61
RFTN1-201ENST00000334133 MROH2AA6NES4 1674 aa25.14■■□□□ 1.61
RFTN1-201ENST00000334133 PDE3BQ13370 1112 aa25.14■■□□□ 1.61
RFTN1-201ENST00000334133 BLMP54132 1417 aaPredicted RBP25.13■■□□□ 1.61
RFTN1-201ENST00000334133 CARD14Q9BXL6 1004 aa25.12■■□□□ 1.61
RFTN1-201ENST00000334133 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
RFTN1-201ENST00000334133 KIF1BO60333 1816 aa25.12■■□□□ 1.61
RFTN1-201ENST00000334133 NPATQ14207 1427 aa25.12■■□□□ 1.61
RFTN1-201ENST00000334133 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
RFTN1-201ENST00000334133 TNNT2P45379 298 aaPredicted RBP25.1■■□□□ 1.61
RFTN1-201ENST00000334133 FANCIQ9NVI1 1328 aa25.09■■□□□ 1.61
RFTN1-201ENST00000334133 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
RFTN1-201ENST00000334133 ASXL1Q8IXJ9 1541 aa25.08■■□□□ 1.61
RFTN1-201ENST00000334133 PLEKHH1Q9ULM0 1364 aa25.08■■□□□ 1.61
RFTN1-201ENST00000334133 SYNMO15061 1565 aa25.08■■□□□ 1.6
RFTN1-201ENST00000334133 FRMPD1Q5SYB0 1578 aa25.07■■□□□ 1.6
RFTN1-201ENST00000334133 MYOM1P52179 1685 aa25.07■■□□□ 1.6
RFTN1-201ENST00000334133 MYOM2P54296 1465 aa25.05■■□□□ 1.6
RFTN1-201ENST00000334133 CENPJQ9HC77 1338 aaPredicted RBP25.05■■□□□ 1.6
RFTN1-201ENST00000334133 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
RFTN1-201ENST00000334133 SLC12A5Q9H2X9 1139 aa25.05■■□□□ 1.6
RFTN1-201ENST00000334133 C20orf194Q5TEA3 1177 aa25.03■■□□□ 1.6
RFTN1-201ENST00000334133 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
RFTN1-201ENST00000334133 KDM5AP29375 1690 aaKnown RBP25.03■■□□□ 1.6
RFTN1-201ENST00000334133 SKAP1Q86WV1 359 aa25.03■■□□□ 1.6
RFTN1-201ENST00000334133 CRBNQ96SW2 442 aa25.02■■□□□ 1.6
RFTN1-201ENST00000334133 APAF1O14727 1248 aa25.01■■□□□ 1.59
RFTN1-201ENST00000334133 ERICH6Q7L0X2 663 aa25.01■■□□□ 1.59
RFTN1-201ENST00000334133 MLH3Q9UHC1 1453 aa25.01■■□□□ 1.59
RFTN1-201ENST00000334133 HECW2Q9P2P5 1572 aa25■■□□□ 1.59
RFTN1-201ENST00000334133 ZMYM4Q5VZL5 1548 aa25■■□□□ 1.59
RFTN1-201ENST00000334133 KIAA1210Q9ULL0 1709 aa25■■□□□ 1.59
RFTN1-201ENST00000334133 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
RFTN1-201ENST00000334133 LMTK2Q8IWU2 1503 aa24.99■■□□□ 1.59
RFTN1-201ENST00000334133 ADGRB3O60242 1522 aa24.98■■□□□ 1.59
RFTN1-201ENST00000334133 IFT172Q9UG01 1749 aa24.98■■□□□ 1.59
RFTN1-201ENST00000334133 DUSP27Q5VZP5 1158 aa24.96■■□□□ 1.59
RFTN1-201ENST00000334133 SPINK5Q9NQ38 1064 aaPredicted RBP24.96■■□□□ 1.59
RFTN1-201ENST00000334133 STK26Q9P289 416 aa24.96■■□□□ 1.59
RFTN1-201ENST00000334133 GOLGA2Q08379 1002 aa24.96■■□□□ 1.59
RFTN1-201ENST00000334133 ABCC3O15438 1527 aa24.95■■□□□ 1.58
RFTN1-201ENST00000334133 NRXN1Q9ULB1 1477 aa24.94■■□□□ 1.58
RFTN1-201ENST00000334133 IDI1Q13907 227 aa24.94■■□□□ 1.58
RFTN1-201ENST00000334133 PIK3C2GO75747 1445 aa24.94■■□□□ 1.58
RFTN1-201ENST00000334133 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
RFTN1-201ENST00000334133 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
RFTN1-201ENST00000334133 DMRT2Q9Y5R5 561 aa24.92■■□□□ 1.58
RFTN1-201ENST00000334133 INSRP06213 1382 aa24.92■■□□□ 1.58
RFTN1-201ENST00000334133 NEUROD2Q15784 382 aa24.92■■□□□ 1.58
RFTN1-201ENST00000334133 NSD3Q9BZ95 1437 aa24.92■■□□□ 1.58
RFTN1-201ENST00000334133 CFAP74Q9C0B2 1584 aa24.91■■□□□ 1.58
RFTN1-201ENST00000334133 MORC1Q86VD1 984 aa24.91■■□□□ 1.58
RFTN1-201ENST00000334133 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
RFTN1-201ENST00000334133 NPC1L1Q9UHC9 1359 aa24.9■■□□□ 1.58
RFTN1-201ENST00000334133 ZNF521Q96K83 1311 aa24.9■■□□□ 1.58
RFTN1-201ENST00000334133 CABP2Q9NPB3 220 aa24.89■■□□□ 1.58
RFTN1-201ENST00000334133 SLC24A1O60721 1099 aa24.89■■□□□ 1.57
RFTN1-201ENST00000334133 PPLO60437 1756 aa24.88■■□□□ 1.57
RFTN1-201ENST00000334133 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
RFTN1-201ENST00000334133 RRP7AQ9Y3A4 280 aaKnown RBP24.87■■□□□ 1.57
RFTN1-201ENST00000334133 FBXO31Q5XUX0 539 aaPredicted RBP24.87■■□□□ 1.57
RFTN1-201ENST00000334133 SLFN5Q08AF3 891 aa24.87■■□□□ 1.57
RFTN1-201ENST00000334133 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
RFTN1-201ENST00000334133 ADGRB1O14514 1584 aa24.85■■□□□ 1.57
RFTN1-201ENST00000334133 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
RFTN1-201ENST00000334133 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
RFTN1-201ENST00000334133 PAK3O75914 559 aaPredicted RBP24.84■■□□□ 1.57
RFTN1-201ENST00000334133 NEO1Q92859 1461 aa24.84■■□□□ 1.57
RFTN1-201ENST00000334133 SBNO2Q9Y2G9 1366 aa24.83■■□□□ 1.57
RFTN1-201ENST00000334133 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
RFTN1-201ENST00000334133 RPGRIP1LQ68CZ1 1315 aa24.83■■□□□ 1.57
RFTN1-201ENST00000334133 BCAR3O75815 825 aa24.82■■□□□ 1.56
RFTN1-201ENST00000334133 FAM69CQ0P6D2 419 aa24.82■■□□□ 1.56
RFTN1-201ENST00000334133 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
RFTN1-201ENST00000334133 MTHFSP49914 203 aa24.8■■□□□ 1.56
RFTN1-201ENST00000334133 MYO3AQ8NEV4 1616 aa24.8■■□□□ 1.56
RFTN1-201ENST00000334133 ANP32AP39687 249 aaKnown RBP24.78■■□□□ 1.56
RFTN1-201ENST00000334133 SRPK2P78362 688 aaKnown RBP24.78■■□□□ 1.56
RFTN1-201ENST00000334133 MLECQ14165 292 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms