RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.12
CCDC87-201ENST00000333861 CDC42BPBQ9Y5S2 1711 aa14.33□□□□□ -0.12
CCDC87-201ENST00000333861 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
CCDC87-201ENST00000333861 DISP3Q9P2K9 1392 aa14.32□□□□□ -0.12
CCDC87-201ENST00000333861 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
CCDC87-201ENST00000333861 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
CCDC87-201ENST00000333861 SYCP2Q9BX26 1530 aa14.32□□□□□ -0.12
CCDC87-201ENST00000333861 APAF1O14727 1248 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
CCDC87-201ENST00000333861 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 PREX2Q70Z35 1606 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 A0A0U1RQG5 324 aaPredicted RBP14.31□□□□□ -0.12
CCDC87-201ENST00000333861 WDR43Q15061 677 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC87-201ENST00000333861 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
CCDC87-201ENST00000333861 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 C9orf84Q5VXU9 1444 aa14.31□□□□□ -0.12
CCDC87-201ENST00000333861 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
CCDC87-201ENST00000333861 USP19O94966 1318 aa14.29□□□□□ -0.12
CCDC87-201ENST00000333861 MYO5CQ9NQX4 1742 aa14.29□□□□□ -0.12
CCDC87-201ENST00000333861 MBD5Q9P267 1494 aa14.29□□□□□ -0.12
CCDC87-201ENST00000333861 GOLGA6L3A6NEY3 463 aa14.29□□□□□ -0.12
CCDC87-201ENST00000333861 FAM69CQ0P6D2 419 aa14.29□□□□□ -0.12
CCDC87-201ENST00000333861 ZBTB7CA1YPR0 619 aa14.28□□□□□ -0.12
CCDC87-201ENST00000333861 KDM5CP41229 1560 aa14.28□□□□□ -0.12
CCDC87-201ENST00000333861 FANCAO15360 1455 aa14.28□□□□□ -0.12
CCDC87-201ENST00000333861 L1TD1Q5T7N2 865 aaKnown RBP14.28□□□□□ -0.12
CCDC87-201ENST00000333861 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
CCDC87-201ENST00000333861 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
CCDC87-201ENST00000333861 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
CCDC87-201ENST00000333861 ERBB4Q15303 1308 aa14.27□□□□□ -0.13
CCDC87-201ENST00000333861 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
CCDC87-201ENST00000333861 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
CCDC87-201ENST00000333861 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
CCDC87-201ENST00000333861 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
CCDC87-201ENST00000333861 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
CCDC87-201ENST00000333861 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
CCDC87-201ENST00000333861 CLCN1P35523 988 aa14.24□□□□□ -0.13
CCDC87-201ENST00000333861 SPAG9O60271 1321 aaKnown RBP14.24□□□□□ -0.13
CCDC87-201ENST00000333861 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
CCDC87-201ENST00000333861 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
CCDC87-201ENST00000333861 RBM10P98175 930 aaKnown RBP14.23□□□□□ -0.13
CCDC87-201ENST00000333861 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
CCDC87-201ENST00000333861 PPP2R1AP30153 589 aa14.23□□□□□ -0.13
CCDC87-201ENST00000333861 MFAP1P55081 439 aaKnown RBP14.22□□□□□ -0.13
CCDC87-201ENST00000333861 ADGRL1O94910 1474 aa14.22□□□□□ -0.13
CCDC87-201ENST00000333861 RAPGEF3O95398 923 aa14.21□□□□□ -0.13
CCDC87-201ENST00000333861 TBC1D2Q9BYX2 928 aa14.21□□□□□ -0.13
CCDC87-201ENST00000333861 ABCA9Q8IUA7 1624 aa14.21□□□□□ -0.13
CCDC87-201ENST00000333861 PLEKHH2Q8IVE3 1493 aa14.21□□□□□ -0.13
CCDC87-201ENST00000333861 BECN1Q14457 450 aa14.2□□□□□ -0.14
CCDC87-201ENST00000333861 KNSTRNQ9Y448 316 aa14.2□□□□□ -0.14
CCDC87-201ENST00000333861 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
CCDC87-201ENST00000333861 RLBP1P12271 317 aa14.19□□□□□ -0.14
CCDC87-201ENST00000333861 TESK2Q96S53 571 aa14.19□□□□□ -0.14
CCDC87-201ENST00000333861 ADGRL2O95490 1459 aa14.19□□□□□ -0.14
CCDC87-201ENST00000333861 ARHGEF5Q12774 1597 aa14.19□□□□□ -0.14
CCDC87-201ENST00000333861 CROCC2H7BZ55 1655 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 PCDHB15Q9Y5E8 787 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 ABCC1P33527 1531 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 ESPNB1AK53 854 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
CCDC87-201ENST00000333861 TRAK2O60296 914 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
CCDC87-201ENST00000333861 MCM4P33991 863 aa14.17□□□□□ -0.14
CCDC87-201ENST00000333861 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
CCDC87-201ENST00000333861 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
CCDC87-201ENST00000333861 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
CCDC87-201ENST00000333861 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.14□□□□□ -0.15
CCDC87-201ENST00000333861 RALGAPBQ86X10 1494 aa14.14□□□□□ -0.15
CCDC87-201ENST00000333861 TRIM44Q96DX7 344 aaPredicted RBP14.14□□□□□ -0.15
CCDC87-201ENST00000333861 GRPEL1Q9HAV7 217 aa14.14□□□□□ -0.15
CCDC87-201ENST00000333861 TMF1P82094 1093 aa14.13□□□□□ -0.15
CCDC87-201ENST00000333861 ARAP3Q8WWN8 1544 aa14.13□□□□□ -0.15
CCDC87-201ENST00000333861 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
CCDC87-201ENST00000333861 GAS2L3Q86XJ1 694 aa14.13□□□□□ -0.15
CCDC87-201ENST00000333861 KIF3BO15066 747 aa14.12□□□□□ -0.15
CCDC87-201ENST00000333861 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
CCDC87-201ENST00000333861 KIAA1211Q6ZU35 1233 aa14.12□□□□□ -0.15
CCDC87-201ENST00000333861 FAM13BQ9NYF5 915 aa14.11□□□□□ -0.15
CCDC87-201ENST00000333861 BLMP54132 1417 aaPredicted RBP14.1□□□□□ -0.15
CCDC87-201ENST00000333861 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
CCDC87-201ENST00000333861 PRDM10Q9NQV6 1147 aa14.09□□□□□ -0.15
CCDC87-201ENST00000333861 MRE11P49959 708 aa14.09□□□□□ -0.15
CCDC87-201ENST00000333861 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
CCDC87-201ENST00000333861 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
CCDC87-201ENST00000333861 MAGI2Q86UL8 1455 aa14.08□□□□□ -0.16
CCDC87-201ENST00000333861 ERBINQ96RT1 1412 aa14.08□□□□□ -0.16
CCDC87-201ENST00000333861 UPF2Q9HAU5 1272 aaKnown RBP14.08□□□□□ -0.16
CCDC87-201ENST00000333861 ZNF518AQ6AHZ1 1483 aa14.08□□□□□ -0.16
CCDC87-201ENST00000333861 DIP2BQ9P265 1576 aa14.08□□□□□ -0.16
CCDC87-201ENST00000333861 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
CCDC87-201ENST00000333861 GGT6Q6P531 493 aa14.07□□□□□ -0.16
CCDC87-201ENST00000333861 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
CCDC87-201ENST00000333861 CHAMP1Q96JM3 812 aa14.07□□□□□ -0.16
CCDC87-201ENST00000333861 ATP7AQ04656 1500 aa14.07□□□□□ -0.16
CCDC87-201ENST00000333861 MPNDQ8N594 471 aa14.07□□□□□ -0.16
CCDC87-201ENST00000333861 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms