RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
LSAMP-201ENST00000333617 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
LSAMP-201ENST00000333617 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
LSAMP-201ENST00000333617 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
LSAMP-201ENST00000333617 KIF15Q9NS87 1388 aa12.4□□□□□ -0.42
LSAMP-201ENST00000333617 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.42
LSAMP-201ENST00000333617 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
LSAMP-201ENST00000333617 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
LSAMP-201ENST00000333617 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
LSAMP-201ENST00000333617 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
LSAMP-201ENST00000333617 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
LSAMP-201ENST00000333617 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
LSAMP-201ENST00000333617 PLCH2O75038 1416 aa12.39□□□□□ -0.43
LSAMP-201ENST00000333617 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
LSAMP-201ENST00000333617 ST18O60284 1047 aa12.38□□□□□ -0.43
LSAMP-201ENST00000333617 ARAP3Q8WWN8 1544 aa12.37□□□□□ -0.43
LSAMP-201ENST00000333617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
LSAMP-201ENST00000333617 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
LSAMP-201ENST00000333617 ZFP91Q96JP5 570 aaPredicted RBP12.37□□□□□ -0.43
LSAMP-201ENST00000333617 ABCC1P33527 1531 aa12.37□□□□□ -0.43
LSAMP-201ENST00000333617 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
LSAMP-201ENST00000333617 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
LSAMP-201ENST00000333617 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
LSAMP-201ENST00000333617 UNC13BO14795 1591 aa12.36□□□□□ -0.43
LSAMP-201ENST00000333617 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
LSAMP-201ENST00000333617 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
LSAMP-201ENST00000333617 NUP155O75694 1391 aa12.35□□□□□ -0.43
LSAMP-201ENST00000333617 EFCAB2Q5VUJ9 269 aa12.35□□□□□ -0.43
LSAMP-201ENST00000333617 ARHGEF12Q9NZN5 1544 aa12.35□□□□□ -0.43
LSAMP-201ENST00000333617 PKD2Q13563 968 aa12.34□□□□□ -0.43
LSAMP-201ENST00000333617 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
LSAMP-201ENST00000333617 POLR1AO95602 1720 aaPredicted RBP12.33□□□□□ -0.44
LSAMP-201ENST00000333617 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
LSAMP-201ENST00000333617 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
LSAMP-201ENST00000333617 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
LSAMP-201ENST00000333617 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
LSAMP-201ENST00000333617 FAM135AQ9P2D6 1515 aa12.31□□□□□ -0.44
LSAMP-201ENST00000333617 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
LSAMP-201ENST00000333617 G3V3G9 751 aa12.3□□□□□ -0.44
LSAMP-201ENST00000333617 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
LSAMP-201ENST00000333617 YTHDC1Q96MU7 727 aaKnown RBP12.3□□□□□ -0.44
LSAMP-201ENST00000333617 ASXL2Q76L83 1435 aa12.29□□□□□ -0.44
LSAMP-201ENST00000333617 SOX12O15370 315 aa12.29□□□□□ -0.44
LSAMP-201ENST00000333617 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
LSAMP-201ENST00000333617 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
LSAMP-201ENST00000333617 FANCAO15360 1455 aa12.27□□□□□ -0.44
LSAMP-201ENST00000333617 BOLA1Q9Y3E2 137 aa12.26□□□□□ -0.45
LSAMP-201ENST00000333617 ZFYVE16Q7Z3T8 1539 aa12.26□□□□□ -0.45
LSAMP-201ENST00000333617 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
LSAMP-201ENST00000333617 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
LSAMP-201ENST00000333617 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
LSAMP-201ENST00000333617 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
LSAMP-201ENST00000333617 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
LSAMP-201ENST00000333617 INO80Q9ULG1 1556 aaPredicted RBP12.25□□□□□ -0.45
LSAMP-201ENST00000333617 RGL2O15211 777 aa12.25□□□□□ -0.45
LSAMP-201ENST00000333617 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
LSAMP-201ENST00000333617 NBPF8Q3BBV2 869 aa12.24□□□□□ -0.45
LSAMP-201ENST00000333617 SPAG9O60271 1321 aaKnown RBP12.24□□□□□ -0.45
LSAMP-201ENST00000333617 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
LSAMP-201ENST00000333617 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
LSAMP-201ENST00000333617 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
LSAMP-201ENST00000333617 ADGRL1O94910 1474 aa12.23□□□□□ -0.45
LSAMP-201ENST00000333617 STK25O00506 426 aa12.22□□□□□ -0.45
LSAMP-201ENST00000333617 SNPHO15079 494 aa12.22□□□□□ -0.45
LSAMP-201ENST00000333617 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.46
LSAMP-201ENST00000333617 E9PCH4 1651 aa12.21□□□□□ -0.46
LSAMP-201ENST00000333617 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.46
LSAMP-201ENST00000333617 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
LSAMP-201ENST00000333617 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
LSAMP-201ENST00000333617 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
LSAMP-201ENST00000333617 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
LSAMP-201ENST00000333617 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
LSAMP-201ENST00000333617 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
LSAMP-201ENST00000333617 KDM5CP41229 1560 aa12.19□□□□□ -0.46
LSAMP-201ENST00000333617 ANP32CO43423 234 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
LSAMP-201ENST00000333617 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 RALGAPBQ86X10 1494 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 TET3O43151 1660 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 CEP152O94986 1710 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 WASHC2AQ641Q2 1341 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 NLRP6P59044 892 aa12.18□□□□□ -0.46
LSAMP-201ENST00000333617 ATP10AO60312 1499 aa12.17□□□□□ -0.46
LSAMP-201ENST00000333617 PLA2R1Q13018 1463 aa12.17□□□□□ -0.46
LSAMP-201ENST00000333617 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
LSAMP-201ENST00000333617 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
LSAMP-201ENST00000333617 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
LSAMP-201ENST00000333617 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
LSAMP-201ENST00000333617 BCORL1Q5H9F3 1711 aa12.16□□□□□ -0.46
LSAMP-201ENST00000333617 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
LSAMP-201ENST00000333617 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.46
LSAMP-201ENST00000333617 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.46
LSAMP-201ENST00000333617 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.46
LSAMP-201ENST00000333617 CCDC7Q96M83 1385 aa12.15□□□□□ -0.47
LSAMP-201ENST00000333617 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
LSAMP-201ENST00000333617 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
LSAMP-201ENST00000333617 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
LSAMP-201ENST00000333617 USP47Q96K76 1375 aa12.14□□□□□ -0.47
LSAMP-201ENST00000333617 VWDEQ8N2E2 1590 aa12.14□□□□□ -0.47
LSAMP-201ENST00000333617 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms