RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 CENPQQ7L2Z9 268 aaPredicted RBP15.11■□□□□ 0.01
LIMK2-202ENST00000333611 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
LIMK2-202ENST00000333611 TESK2Q96S53 571 aa15.11■□□□□ 0.01
LIMK2-202ENST00000333611 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
LIMK2-202ENST00000333611 R3HCC1Q9Y3T6 440 aaKnown RBP15.1■□□□□ 0.01
LIMK2-202ENST00000333611 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
LIMK2-202ENST00000333611 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
LIMK2-202ENST00000333611 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
LIMK2-202ENST00000333611 UHRF1BP1Q6BDS2 1440 aa15.09■□□□□ 0.01
LIMK2-202ENST00000333611 ANP32BQ92688 251 aaKnown RBP15.09■□□□□ 0.01
LIMK2-202ENST00000333611 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
LIMK2-202ENST00000333611 VGLL3A8MV65 326 aa15.08■□□□□ 0.01
LIMK2-202ENST00000333611 DUSP27Q5VZP5 1158 aa15.08■□□□□ 0.01
LIMK2-202ENST00000333611 COG6Q9Y2V7 657 aa15.08■□□□□ 0.01
LIMK2-202ENST00000333611 PLEKHH1Q9ULM0 1364 aa15.08■□□□□ 0
LIMK2-202ENST00000333611 ERBINQ96RT1 1412 aa15.08■□□□□ 0
LIMK2-202ENST00000333611 CLUAP1Q96AJ1 413 aa15.07■□□□□ 0
LIMK2-202ENST00000333611 POLR1AO95602 1720 aaPredicted RBP15.07■□□□□ 0
LIMK2-202ENST00000333611 PANK1Q8TE04 598 aa15.07■□□□□ 0
LIMK2-202ENST00000333611 ERCC6Q03468 1493 aa15.07■□□□□ 0
LIMK2-202ENST00000333611 MSNP26038 577 aaKnown RBP15.07■□□□□ 0
LIMK2-202ENST00000333611 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
LIMK2-202ENST00000333611 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
LIMK2-202ENST00000333611 PRAG1Q86YV5 1406 aa15.06■□□□□ 0
LIMK2-202ENST00000333611 UPF2Q9HAU5 1272 aaKnown RBP15.05■□□□□ -0
LIMK2-202ENST00000333611 CDK11BP21127 795 aaKnown RBP15.04■□□□□ -0
LIMK2-202ENST00000333611 C8orf34Q49A92 452 aa15.04■□□□□ -0
LIMK2-202ENST00000333611 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
LIMK2-202ENST00000333611 ADGRL2O95490 1459 aa15.03■□□□□ -0
LIMK2-202ENST00000333611 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
LIMK2-202ENST00000333611 NCLP19338 710 aaKnown RBP15.03■□□□□ -0
LIMK2-202ENST00000333611 IFT140Q96RY7 1462 aa15.03■□□□□ -0
LIMK2-202ENST00000333611 TPM2P07951 284 aa15.02■□□□□ -0
LIMK2-202ENST00000333611 CALD1Q05682 793 aaKnown RBP15.02□□□□□ -0.01
LIMK2-202ENST00000333611 ITSN2Q9NZM3 1697 aa15.01□□□□□ -0.01
LIMK2-202ENST00000333611 ATP10BO94823 1461 aa15.01□□□□□ -0.01
LIMK2-202ENST00000333611 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
LIMK2-202ENST00000333611 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
LIMK2-202ENST00000333611 IGHDP01880 384 aa15.01□□□□□ -0.01
LIMK2-202ENST00000333611 DNTTIP2Q5QJE6 756 aaKnown RBP15.01□□□□□ -0.01
LIMK2-202ENST00000333611 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 TRAK2O60296 914 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 ARHGEF12Q9NZN5 1544 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 PTPRGP23470 1445 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 KDM2BQ8NHM5 1336 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 SLFN5Q08AF3 891 aa15□□□□□ -0.01
LIMK2-202ENST00000333611 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
LIMK2-202ENST00000333611 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
LIMK2-202ENST00000333611 SEC24BO95487 1268 aa14.99□□□□□ -0.01
LIMK2-202ENST00000333611 GRPEL1Q9HAV7 217 aa14.99□□□□□ -0.01
LIMK2-202ENST00000333611 A2MP01023 1474 aa14.99□□□□□ -0.01
LIMK2-202ENST00000333611 CDCA8Q53HL2 280 aa14.98□□□□□ -0.01
LIMK2-202ENST00000333611 MRE11P49959 708 aa14.97□□□□□ -0.01
LIMK2-202ENST00000333611 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
LIMK2-202ENST00000333611 IGSF3O75054 1194 aa14.97□□□□□ -0.01
LIMK2-202ENST00000333611 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
LIMK2-202ENST00000333611 CFAP70Q5T0N1 1121 aa14.96□□□□□ -0.01
LIMK2-202ENST00000333611 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
LIMK2-202ENST00000333611 PRDM4Q9UKN5 801 aa14.96□□□□□ -0.01
LIMK2-202ENST00000333611 CCDC141Q6ZP82 1450 aa14.96□□□□□ -0.02
LIMK2-202ENST00000333611 ARHGAP5Q13017 1502 aa14.95□□□□□ -0.02
LIMK2-202ENST00000333611 BLMP54132 1417 aaPredicted RBP14.95□□□□□ -0.02
LIMK2-202ENST00000333611 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
LIMK2-202ENST00000333611 UQCRHLA0A096LP55 91 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 E9PSI1 815 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 UQCRHP07919 91 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 MCM4P33991 863 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 SAFB2Q14151 953 aaKnown RBP eCLIP14.93□□□□□ -0.02
LIMK2-202ENST00000333611 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 NUTM2DQ5VT03 806 aaPredicted RBP14.93□□□□□ -0.02
LIMK2-202ENST00000333611 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
LIMK2-202ENST00000333611 KDM5DQ9BY66 1539 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 MAGI2Q86UL8 1455 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 MPNDQ8N594 471 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 CBX1P83916 185 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
LIMK2-202ENST00000333611 CHMP4AQ9BY43 222 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 TRAK1Q9UPV9 953 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
LIMK2-202ENST00000333611 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
LIMK2-202ENST00000333611 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
LIMK2-202ENST00000333611 KIF3BO15066 747 aa14.91□□□□□ -0.02
LIMK2-202ENST00000333611 SYCP2Q9BX26 1530 aa14.91□□□□□ -0.02
LIMK2-202ENST00000333611 ABCC10Q5T3U5 1492 aa14.9□□□□□ -0.02
LIMK2-202ENST00000333611 MFAP1P55081 439 aaKnown RBP14.9□□□□□ -0.02
LIMK2-202ENST00000333611 CDC42BPAQ5VT25 1732 aa14.89□□□□□ -0.03
LIMK2-202ENST00000333611 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
LIMK2-202ENST00000333611 CROCC2H7BZ55 1655 aa14.88□□□□□ -0.03
LIMK2-202ENST00000333611 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
LIMK2-202ENST00000333611 SPAG9O60271 1321 aaKnown RBP14.88□□□□□ -0.03
LIMK2-202ENST00000333611 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
LIMK2-202ENST00000333611 CGNL1Q0VF96 1302 aa14.88□□□□□ -0.03
LIMK2-202ENST00000333611 EFCAB2Q5VUJ9 269 aa14.87□□□□□ -0.03
LIMK2-202ENST00000333611 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
LIMK2-202ENST00000333611 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
LIMK2-202ENST00000333611 GPRASP1Q5JY77 1395 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms