RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.17
LCK-201ENST00000333070 TESK2Q96S53 571 aa22.32■■□□□ 1.16
LCK-201ENST00000333070 MYOM2P54296 1465 aa22.32■■□□□ 1.16
LCK-201ENST00000333070 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
LCK-201ENST00000333070 CFAP65Q6ZU64 1925 aaKnown RBP22.32■■□□□ 1.16
LCK-201ENST00000333070 MROH2AA6NES4 1674 aa22.32■■□□□ 1.16
LCK-201ENST00000333070 KIAA1210Q9ULL0 1709 aa22.31■■□□□ 1.16
LCK-201ENST00000333070 ADGRB3O60242 1522 aa22.3■■□□□ 1.16
LCK-201ENST00000333070 IQGAP1P46940 1657 aa22.3■■□□□ 1.16
LCK-201ENST00000333070 ZC3H13Q5T200 1668 aaKnown RBP22.3■■□□□ 1.16
LCK-201ENST00000333070 NOS1P29475 1434 aa22.3■■□□□ 1.16
LCK-201ENST00000333070 B4GALNT3Q6L9W6 998 aa22.29■■□□□ 1.16
LCK-201ENST00000333070 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
LCK-201ENST00000333070 ARHGAP31Q2M1Z3 1444 aa22.29■■□□□ 1.16
LCK-201ENST00000333070 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
LCK-201ENST00000333070 SIGLEC1Q9BZZ2 1709 aa22.28■■□□□ 1.16
LCK-201ENST00000333070 CCDC184Q52MB2 194 aa22.26■■□□□ 1.15
LCK-201ENST00000333070 NRXN1Q9ULB1 1477 aa22.26■■□□□ 1.15
LCK-201ENST00000333070 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
LCK-201ENST00000333070 NBR1Q14596 966 aa22.25■■□□□ 1.15
LCK-201ENST00000333070 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
LCK-201ENST00000333070 SCAF11Q99590 1463 aaKnown RBP22.25■■□□□ 1.15
LCK-201ENST00000333070 ADGRF5Q8IZF2 1346 aa22.24■■□□□ 1.15
LCK-201ENST00000333070 DISP3Q9P2K9 1392 aa22.24■■□□□ 1.15
LCK-201ENST00000333070 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
LCK-201ENST00000333070 PIK3C2BO00750 1634 aa22.23■■□□□ 1.15
LCK-201ENST00000333070 SYNMO15061 1565 aa22.23■■□□□ 1.15
LCK-201ENST00000333070 AGLP35573 1532 aa22.21■■□□□ 1.15
LCK-201ENST00000333070 PPLO60437 1756 aa22.2■■□□□ 1.14
LCK-201ENST00000333070 TMF1P82094 1093 aa22.2■■□□□ 1.14
LCK-201ENST00000333070 CFAP70Q5T0N1 1121 aa22.19■■□□□ 1.14
LCK-201ENST00000333070 IPO9Q96P70 1041 aaKnown RBP22.19■■□□□ 1.14
LCK-201ENST00000333070 RPGRIP1LQ68CZ1 1315 aa22.19■■□□□ 1.14
LCK-201ENST00000333070 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
LCK-201ENST00000333070 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
LCK-201ENST00000333070 ANP32AP39687 249 aaKnown RBP22.16■■□□□ 1.14
LCK-201ENST00000333070 RTL5Q5HYW3 569 aaPredicted RBP22.16■■□□□ 1.14
LCK-201ENST00000333070 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
LCK-201ENST00000333070 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
LCK-201ENST00000333070 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.13
LCK-201ENST00000333070 KTN1Q86UP2 1357 aaKnown RBP22.14■■□□□ 1.13
LCK-201ENST00000333070 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.13
LCK-201ENST00000333070 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
LCK-201ENST00000333070 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
LCK-201ENST00000333070 SLC52A1Q9NWF4 448 aa22.13■■□□□ 1.13
LCK-201ENST00000333070 SETBP1Q9Y6X0 1596 aa22.13■■□□□ 1.13
LCK-201ENST00000333070 IDI1Q13907 227 aa22.12■■□□□ 1.13
LCK-201ENST00000333070 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
LCK-201ENST00000333070 ZBTB47Q9UFB7 747 aaPredicted RBP22.11■■□□□ 1.13
LCK-201ENST00000333070 ARHGEF40Q8TER5 1519 aa22.11■■□□□ 1.13
LCK-201ENST00000333070 C14orf93Q9H972 538 aaKnown RBP22.11■■□□□ 1.13
LCK-201ENST00000333070 RALBP1Q15311 655 aa22.09■■□□□ 1.13
LCK-201ENST00000333070 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
LCK-201ENST00000333070 CNGB1Q14028 1251 aaPredicted RBP22.08■■□□□ 1.12
LCK-201ENST00000333070 CDCA8Q53HL2 280 aa22.07■■□□□ 1.12
LCK-201ENST00000333070 PANK3Q9H999 370 aa22.07■■□□□ 1.12
LCK-201ENST00000333070 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
LCK-201ENST00000333070 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
LCK-201ENST00000333070 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
LCK-201ENST00000333070 ERVK-7P63135 1459 aa22.06■■□□□ 1.12
LCK-201ENST00000333070 SLC24A1O60721 1099 aa22.05■■□□□ 1.12
LCK-201ENST00000333070 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
LCK-201ENST00000333070 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
LCK-201ENST00000333070 TMEM131LA2VDJ0 1609 aa22.05■■□□□ 1.12
LCK-201ENST00000333070 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
LCK-201ENST00000333070 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
LCK-201ENST00000333070 MYBBP1AQ9BQG0 1328 aaKnown RBP22.04■■□□□ 1.12
LCK-201ENST00000333070 FBXO31Q5XUX0 539 aaPredicted RBP22.04■■□□□ 1.12
LCK-201ENST00000333070 CLTCQ00610 1675 aaKnown RBP22.03■■□□□ 1.12
LCK-201ENST00000333070 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
LCK-201ENST00000333070 SBNO2Q9Y2G9 1366 aa22.03■■□□□ 1.12
LCK-201ENST00000333070 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
LCK-201ENST00000333070 CCDC136Q96JN2 1154 aa22.02■■□□□ 1.12
LCK-201ENST00000333070 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
LCK-201ENST00000333070 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
LCK-201ENST00000333070 KDM5AP29375 1690 aaKnown RBP21.99■■□□□ 1.11
LCK-201ENST00000333070 MYOM1P52179 1685 aa21.99■■□□□ 1.11
LCK-201ENST00000333070 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
LCK-201ENST00000333070 SPATA31D1Q6ZQQ2 1576 aa21.98■■□□□ 1.11
LCK-201ENST00000333070 CENPJQ9HC77 1338 aaPredicted RBP21.97■■□□□ 1.11
LCK-201ENST00000333070 NUTM2DQ5VT03 806 aaPredicted RBP21.97■■□□□ 1.11
LCK-201ENST00000333070 TMEM132EQ6IEE7 984 aa21.97■■□□□ 1.11
LCK-201ENST00000333070 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
LCK-201ENST00000333070 MLECQ14165 292 aa21.95■■□□□ 1.1
LCK-201ENST00000333070 NLRP13Q86W25 1043 aa21.95■■□□□ 1.1
LCK-201ENST00000333070 USP35Q9P2H5 1018 aa21.95■■□□□ 1.1
LCK-201ENST00000333070 TRAK1Q9UPV9 953 aa21.95■■□□□ 1.1
LCK-201ENST00000333070 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
LCK-201ENST00000333070 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
LCK-201ENST00000333070 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
LCK-201ENST00000333070 QRICH2Q9H0J4 1663 aa21.92■■□□□ 1.1
LCK-201ENST00000333070 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
LCK-201ENST00000333070 AMER1Q5JTC6 1135 aaPredicted RBP21.9■■□□□ 1.1
LCK-201ENST00000333070 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.1
LCK-201ENST00000333070 ASXL1Q8IXJ9 1541 aa21.89■■□□□ 1.09
LCK-201ENST00000333070 A2ML1A8K2U0 1454 aa21.89■■□□□ 1.09
LCK-201ENST00000333070 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
LCK-201ENST00000333070 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
LCK-201ENST00000333070 STAG3Q9UJ98 1225 aa21.85■■□□□ 1.09
LCK-201ENST00000333070 ESF1Q9H501 851 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms