RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 IDI1Q13907 227 aa28.08■■■□□ 2.09
SUMO3-201ENST00000332859 NBPF1Q3BBV0 1214 aa28.08■■■□□ 2.09
SUMO3-201ENST00000332859 POLR1AO95602 1720 aaPredicted RBP28.08■■■□□ 2.08
SUMO3-201ENST00000332859 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.08
SUMO3-201ENST00000332859 WASHC2AQ641Q2 1341 aa28.07■■■□□ 2.08
SUMO3-201ENST00000332859 ZMYM3Q14202 1370 aa28.06■■■□□ 2.08
SUMO3-201ENST00000332859 CCDC7Q96M83 1385 aa28.04■■■□□ 2.08
SUMO3-201ENST00000332859 TMEM131LA2VDJ0 1609 aa28.03■■■□□ 2.08
SUMO3-201ENST00000332859 ADGRF5Q8IZF2 1346 aa28.03■■■□□ 2.08
SUMO3-201ENST00000332859 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.08
SUMO3-201ENST00000332859 C11orf95C9JLR9 678 aaPredicted RBP28■■■□□ 2.07
SUMO3-201ENST00000332859 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
SUMO3-201ENST00000332859 KIF7Q2M1P5 1343 aa27.98■■■□□ 2.07
SUMO3-201ENST00000332859 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
SUMO3-201ENST00000332859 PIK3C2GO75747 1445 aa27.97■■■□□ 2.07
SUMO3-201ENST00000332859 MYO5BQ9ULV0 1848 aa27.96■■■□□ 2.07
SUMO3-201ENST00000332859 GTF3C3Q9Y5Q9 886 aa27.95■■■□□ 2.07
SUMO3-201ENST00000332859 SCAF11Q99590 1463 aaKnown RBP27.95■■■□□ 2.06
SUMO3-201ENST00000332859 VGFO15240 615 aaPredicted RBP27.95■■■□□ 2.06
SUMO3-201ENST00000332859 ZFYVE9O95405 1425 aa27.94■■■□□ 2.06
SUMO3-201ENST00000332859 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
SUMO3-201ENST00000332859 CFAP70Q5T0N1 1121 aa27.92■■■□□ 2.06
SUMO3-201ENST00000332859 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
SUMO3-201ENST00000332859 SETBP1Q9Y6X0 1596 aa27.92■■■□□ 2.06
SUMO3-201ENST00000332859 TNRQ92752 1358 aa27.91■■■□□ 2.06
SUMO3-201ENST00000332859 A2ML1A8K2U0 1454 aa27.89■■■□□ 2.05
SUMO3-201ENST00000332859 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
SUMO3-201ENST00000332859 C14orf93Q9H972 538 aaKnown RBP27.88■■■□□ 2.05
SUMO3-201ENST00000332859 CCER2I3L3R5 266 aa27.85■■■□□ 2.05
SUMO3-201ENST00000332859 ANP32CO43423 234 aa27.85■■■□□ 2.05
SUMO3-201ENST00000332859 C3P01024 1663 aa27.85■■■□□ 2.05
SUMO3-201ENST00000332859 NUTM2DQ5VT03 806 aaPredicted RBP27.83■■■□□ 2.05
SUMO3-201ENST00000332859 TESK2Q96S53 571 aa27.83■■■□□ 2.05
SUMO3-201ENST00000332859 KDM5AP29375 1690 aaKnown RBP27.83■■■□□ 2.05
SUMO3-201ENST00000332859 ADGRB1O14514 1584 aa27.81■■■□□ 2.04
SUMO3-201ENST00000332859 POLR3GLQ9BT43 218 aa27.8■■■□□ 2.04
SUMO3-201ENST00000332859 NLRP1Q9C000 1473 aa27.8■■■□□ 2.04
SUMO3-201ENST00000332859 RIMS2Q9UQ26 1411 aa27.79■■■□□ 2.04
SUMO3-201ENST00000332859 TMF1P82094 1093 aa27.78■■■□□ 2.04
SUMO3-201ENST00000332859 CEBPAP49715 358 aaPredicted RBP27.76■■■□□ 2.04
SUMO3-201ENST00000332859 MYO3AQ8NEV4 1616 aa27.75■■■□□ 2.03
SUMO3-201ENST00000332859 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
SUMO3-201ENST00000332859 DISP3Q9P2K9 1392 aa27.75■■■□□ 2.03
SUMO3-201ENST00000332859 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.74■■■□□ 2.03
SUMO3-201ENST00000332859 SLC24A1O60721 1099 aa27.73■■■□□ 2.03
SUMO3-201ENST00000332859 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
SUMO3-201ENST00000332859 ADAMTSL3P82987 1691 aa27.71■■■□□ 2.03
SUMO3-201ENST00000332859 HDGFP51858 240 aaKnown RBP27.7■■■□□ 2.02
SUMO3-201ENST00000332859 TMEM132EQ6IEE7 984 aa27.69■■■□□ 2.02
SUMO3-201ENST00000332859 ALKQ9UM73 1620 aa27.68■■■□□ 2.02
SUMO3-201ENST00000332859 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
SUMO3-201ENST00000332859 CDCA8Q53HL2 280 aa27.68■■■□□ 2.02
SUMO3-201ENST00000332859 SBNO2Q9Y2G9 1366 aa27.67■■■□□ 2.02
SUMO3-201ENST00000332859 TMEM2Q9UHN6 1383 aa27.67■■■□□ 2.02
SUMO3-201ENST00000332859 TRAK1Q9UPV9 953 aa27.67■■■□□ 2.02
SUMO3-201ENST00000332859 CENPJQ9HC77 1338 aaPredicted RBP27.66■■■□□ 2.02
SUMO3-201ENST00000332859 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
SUMO3-201ENST00000332859 ARHGEF28Q8N1W1 1705 aaKnown RBP27.63■■■□□ 2.01
SUMO3-201ENST00000332859 QRICH2Q9H0J4 1663 aa27.62■■■□□ 2.01
SUMO3-201ENST00000332859 YTHDC2Q9H6S0 1430 aaKnown RBP27.59■■■□□ 2.01
SUMO3-201ENST00000332859 SETD1AO15047 1707 aaKnown RBP27.59■■■□□ 2.01
SUMO3-201ENST00000332859 SENP3Q9H4L4 574 aaPredicted RBP27.59■■■□□ 2.01
SUMO3-201ENST00000332859 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
SUMO3-201ENST00000332859 PTPRMP28827 1452 aa27.57■■■□□ 2
SUMO3-201ENST00000332859 SLIT1O75093 1534 aa27.57■■■□□ 2
SUMO3-201ENST00000332859 PRKRIP1Q9H875 184 aaPredicted RBP27.57■■■□□ 2
SUMO3-201ENST00000332859 ARHGAP23Q9P227 1491 aa27.55■■■□□ 2
SUMO3-201ENST00000332859 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
SUMO3-201ENST00000332859 STK26Q9P289 416 aa27.53■■■□□ 2
SUMO3-201ENST00000332859 CEP170BQ9Y4F5 1589 aaPredicted RBP27.53■■■□□ 2
SUMO3-201ENST00000332859 PLEKHG1Q9ULL1 1385 aa27.52■■■□□ 2
SUMO3-201ENST00000332859 EID1Q9Y6B2 187 aa27.52■■■□□ 2
SUMO3-201ENST00000332859 LRPPRCP42704 1394 aaKnown RBP27.51■■□□□ 1.99
SUMO3-201ENST00000332859 DLC1Q96QB1 1528 aa27.51■■□□□ 1.99
SUMO3-201ENST00000332859 MYOM1P52179 1685 aa27.49■■□□□ 1.99
SUMO3-201ENST00000332859 TXNDC2Q86VQ3 553 aa27.49■■□□□ 1.99
SUMO3-201ENST00000332859 ZNF142P52746 1687 aaPredicted RBP27.48■■□□□ 1.99
SUMO3-201ENST00000332859 LTKP29376 864 aa27.48■■□□□ 1.99
SUMO3-201ENST00000332859 BCANQ96GW7 911 aa27.48■■□□□ 1.99
SUMO3-201ENST00000332859 PANK3Q9H999 370 aa27.48■■□□□ 1.99
SUMO3-201ENST00000332859 ABCC11Q96J66 1382 aa27.45■■□□□ 1.99
SUMO3-201ENST00000332859 EVC2Q86UK5 1308 aa27.45■■□□□ 1.98
SUMO3-201ENST00000332859 KTN1Q86UP2 1357 aaKnown RBP27.45■■□□□ 1.98
SUMO3-201ENST00000332859 PRAM1Q96QH2 718 aa27.44■■□□□ 1.98
SUMO3-201ENST00000332859 POGKQ9P215 609 aa27.44■■□□□ 1.98
SUMO3-201ENST00000332859 METP08581 1390 aa27.44■■□□□ 1.98
SUMO3-201ENST00000332859 ADAMTS13Q76LX8 1427 aa27.44■■□□□ 1.98
SUMO3-201ENST00000332859 PER1O15534 1290 aaPredicted RBP27.44■■□□□ 1.98
SUMO3-201ENST00000332859 PUS7Q96PZ0 661 aaKnown RBP27.44■■□□□ 1.98
SUMO3-201ENST00000332859 TULP4Q9NRJ4 1543 aa27.44■■□□□ 1.98
SUMO3-201ENST00000332859 KNDC1Q76NI1 1749 aa27.43■■□□□ 1.98
SUMO3-201ENST00000332859 SETD1BQ9UPS6 1966 aaKnown RBP27.39■■□□□ 1.98
SUMO3-201ENST00000332859 SAFB2Q14151 953 aaKnown RBP eCLIP27.39■■□□□ 1.98
SUMO3-201ENST00000332859 MED14O60244 1454 aa27.39■■□□□ 1.98
SUMO3-201ENST00000332859 TECPR2O15040 1411 aa27.39■■□□□ 1.98
SUMO3-201ENST00000332859 RALBP1Q15311 655 aa27.39■■□□□ 1.97
SUMO3-201ENST00000332859 DIP2AQ14689 1571 aa27.37■■□□□ 1.97
SUMO3-201ENST00000332859 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
SUMO3-201ENST00000332859 CPS1P31327 1500 aa27.37■■□□□ 1.97
SUMO3-201ENST00000332859 SIRT1Q96EB6 747 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms