RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 PPP2R1AP30153 589 aa25.3■■□□□ 1.64
LAMP1-201ENST00000332556 CCDC146Q8IYE0 955 aa25.3■■□□□ 1.64
LAMP1-201ENST00000332556 TMEM132EQ6IEE7 984 aa25.29■■□□□ 1.64
LAMP1-201ENST00000332556 SKAP1Q86WV1 359 aa25.29■■□□□ 1.64
LAMP1-201ENST00000332556 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
LAMP1-201ENST00000332556 RNF17Q9BXT8 1623 aaKnown RBP25.28■■□□□ 1.64
LAMP1-201ENST00000332556 AMER1Q5JTC6 1135 aaPredicted RBP25.28■■□□□ 1.64
LAMP1-201ENST00000332556 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
LAMP1-201ENST00000332556 ANP32AP39687 249 aaKnown RBP25.28■■□□□ 1.64
LAMP1-201ENST00000332556 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
LAMP1-201ENST00000332556 LAMC1P11047 1609 aa25.27■■□□□ 1.64
LAMP1-201ENST00000332556 CEP152O94986 1710 aa25.26■■□□□ 1.63
LAMP1-201ENST00000332556 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
LAMP1-201ENST00000332556 TNNT2P45379 298 aaPredicted RBP25.25■■□□□ 1.63
LAMP1-201ENST00000332556 IPO9Q96P70 1041 aaKnown RBP25.24■■□□□ 1.63
LAMP1-201ENST00000332556 TET3O43151 1660 aa25.24■■□□□ 1.63
LAMP1-201ENST00000332556 DEPDC5O75140 1603 aa25.24■■□□□ 1.63
LAMP1-201ENST00000332556 MROH1Q8NDA8 1641 aa25.24■■□□□ 1.63
LAMP1-201ENST00000332556 KIDINS220Q9ULH0 1771 aa25.22■■□□□ 1.63
LAMP1-201ENST00000332556 IQGAP1P46940 1657 aa25.22■■□□□ 1.63
LAMP1-201ENST00000332556 WDR43Q15061 677 aaKnown RBP eCLIP25.22■■□□□ 1.63
LAMP1-201ENST00000332556 ARAP3Q8WWN8 1544 aa25.21■■□□□ 1.63
LAMP1-201ENST00000332556 NPM2Q86SE8 214 aaKnown RBP25.2■■□□□ 1.63
LAMP1-201ENST00000332556 CD109Q6YHK3 1445 aa25.2■■□□□ 1.63
LAMP1-201ENST00000332556 CARD14Q9BXL6 1004 aa25.2■■□□□ 1.62
LAMP1-201ENST00000332556 NOS1P29475 1434 aa25.2■■□□□ 1.62
LAMP1-201ENST00000332556 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.62
LAMP1-201ENST00000332556 C20orf194Q5TEA3 1177 aa25.19■■□□□ 1.62
LAMP1-201ENST00000332556 SAFB2Q14151 953 aaKnown RBP eCLIP25.19■■□□□ 1.62
LAMP1-201ENST00000332556 WASHC2CQ9Y4E1 1318 aa25.18■■□□□ 1.62
LAMP1-201ENST00000332556 PLEKHH1Q9ULM0 1364 aa25.17■■□□□ 1.62
LAMP1-201ENST00000332556 MROH2AA6NES4 1674 aa25.17■■□□□ 1.62
LAMP1-201ENST00000332556 PPRC1Q5VV67 1664 aaKnown RBP25.17■■□□□ 1.62
LAMP1-201ENST00000332556 VWDEQ8N2E2 1590 aa25.16■■□□□ 1.62
LAMP1-201ENST00000332556 ABCA6Q8N139 1617 aa25.14■■□□□ 1.62
LAMP1-201ENST00000332556 CRBNQ96SW2 442 aa25.13■■□□□ 1.61
LAMP1-201ENST00000332556 BLMP54132 1417 aaPredicted RBP25.13■■□□□ 1.61
LAMP1-201ENST00000332556 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
LAMP1-201ENST00000332556 SLC12A5Q9H2X9 1139 aa25.13■■□□□ 1.61
LAMP1-201ENST00000332556 ZNF518AQ6AHZ1 1483 aa25.12■■□□□ 1.61
LAMP1-201ENST00000332556 NPATQ14207 1427 aa25.11■■□□□ 1.61
LAMP1-201ENST00000332556 EFCAB6Q5THR3 1501 aa25.11■■□□□ 1.61
LAMP1-201ENST00000332556 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
LAMP1-201ENST00000332556 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
LAMP1-201ENST00000332556 EIF3AQ14152 1382 aaKnown RBP25.1■■□□□ 1.61
LAMP1-201ENST00000332556 PDE3BQ13370 1112 aa25.1■■□□□ 1.61
LAMP1-201ENST00000332556 RTL5Q5HYW3 569 aaPredicted RBP25.1■■□□□ 1.61
LAMP1-201ENST00000332556 APAF1O14727 1248 aa25.09■■□□□ 1.61
LAMP1-201ENST00000332556 MAP3K4Q9Y6R4 1608 aa25.09■■□□□ 1.61
LAMP1-201ENST00000332556 MYOM1P52179 1685 aa25.09■■□□□ 1.61
LAMP1-201ENST00000332556 KIF1BO60333 1816 aa25.07■■□□□ 1.6
LAMP1-201ENST00000332556 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
LAMP1-201ENST00000332556 DMRT2Q9Y5R5 561 aa25.07■■□□□ 1.6
LAMP1-201ENST00000332556 CYB5RLQ6IPT4 315 aa25.07■■□□□ 1.6
LAMP1-201ENST00000332556 NEUROD2Q15784 382 aa25.06■■□□□ 1.6
LAMP1-201ENST00000332556 STK26Q9P289 416 aa25.06■■□□□ 1.6
LAMP1-201ENST00000332556 POGZQ7Z3K3 1410 aa25.05■■□□□ 1.6
LAMP1-201ENST00000332556 FRMPD1Q5SYB0 1578 aa25.05■■□□□ 1.6
LAMP1-201ENST00000332556 CENPJQ9HC77 1338 aaPredicted RBP25.05■■□□□ 1.6
LAMP1-201ENST00000332556 SYNMO15061 1565 aa25.04■■□□□ 1.6
LAMP1-201ENST00000332556 DUSP27Q5VZP5 1158 aa25.03■■□□□ 1.6
LAMP1-201ENST00000332556 LAS1LQ9Y4W2 734 aaKnown RBP25.03■■□□□ 1.6
LAMP1-201ENST00000332556 RRP7AQ9Y3A4 280 aaKnown RBP25.02■■□□□ 1.6
LAMP1-201ENST00000332556 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
LAMP1-201ENST00000332556 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
LAMP1-201ENST00000332556 STAC3Q96MF2 364 aa25■■□□□ 1.59
LAMP1-201ENST00000332556 PDE4AP27815 886 aa24.99■■□□□ 1.59
LAMP1-201ENST00000332556 GOLGA2Q08379 1002 aa24.99■■□□□ 1.59
LAMP1-201ENST00000332556 MYOM2P54296 1465 aa24.98■■□□□ 1.59
LAMP1-201ENST00000332556 CABP2Q9NPB3 220 aa24.98■■□□□ 1.59
LAMP1-201ENST00000332556 C14orf93Q9H972 538 aaKnown RBP24.97■■□□□ 1.59
LAMP1-201ENST00000332556 IDI1Q13907 227 aa24.97■■□□□ 1.59
LAMP1-201ENST00000332556 NSD3Q9BZ95 1437 aa24.96■■□□□ 1.59
LAMP1-201ENST00000332556 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
LAMP1-201ENST00000332556 TCERG1O14776 1098 aaKnown RBP24.95■■□□□ 1.58
LAMP1-201ENST00000332556 MORC1Q86VD1 984 aa24.95■■□□□ 1.58
LAMP1-201ENST00000332556 BCAR3O75815 825 aa24.95■■□□□ 1.58
LAMP1-201ENST00000332556 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.58
LAMP1-201ENST00000332556 ADGRB3O60242 1522 aa24.94■■□□□ 1.58
LAMP1-201ENST00000332556 IFT172Q9UG01 1749 aa24.93■■□□□ 1.58
LAMP1-201ENST00000332556 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
LAMP1-201ENST00000332556 ZNF521Q96K83 1311 aa24.93■■□□□ 1.58
LAMP1-201ENST00000332556 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 PIK3C2GO75747 1445 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 SLFN5Q08AF3 891 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 BACH2Q9BYV9 841 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 ABCC3O15438 1527 aa24.91■■□□□ 1.58
LAMP1-201ENST00000332556 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
LAMP1-201ENST00000332556 NEFMP07197 916 aa24.89■■□□□ 1.58
LAMP1-201ENST00000332556 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
LAMP1-201ENST00000332556 MLECQ14165 292 aa24.88■■□□□ 1.57
LAMP1-201ENST00000332556 LMTK2Q8IWU2 1503 aa24.88■■□□□ 1.57
LAMP1-201ENST00000332556 MTHFSP49914 203 aa24.86■■□□□ 1.57
LAMP1-201ENST00000332556 IL27Q8NEV9 243 aa24.86■■□□□ 1.57
LAMP1-201ENST00000332556 MINK1Q8N4C8 1332 aaPredicted RBP24.85■■□□□ 1.57
LAMP1-201ENST00000332556 PPLO60437 1756 aa24.84■■□□□ 1.57
LAMP1-201ENST00000332556 RTN4Q9NQC3 1192 aaKnown RBP24.84■■□□□ 1.57
LAMP1-201ENST00000332556 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
LAMP1-201ENST00000332556 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms