RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.03
EFCAB13-201ENST00000331493 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.03
EFCAB13-201ENST00000331493 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
EFCAB13-201ENST00000331493 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
EFCAB13-201ENST00000331493 U2AF1L5P0DN76 240 aaPredicted RBP15.25■□□□□ 0.03
EFCAB13-201ENST00000331493 U2AF1Q01081 240 aaKnown RBP eCLIP15.25■□□□□ 0.03
EFCAB13-201ENST00000331493 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
EFCAB13-201ENST00000331493 FAM161AQ3B820 660 aa15.25■□□□□ 0.03
EFCAB13-201ENST00000331493 SAMD9LQ8IVG5 1584 aa15.25■□□□□ 0.03
EFCAB13-201ENST00000331493 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
EFCAB13-201ENST00000331493 ABCA8O94911 1581 aa15.24■□□□□ 0.03
EFCAB13-201ENST00000331493 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
EFCAB13-201ENST00000331493 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
EFCAB13-201ENST00000331493 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
EFCAB13-201ENST00000331493 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
EFCAB13-201ENST00000331493 NFKBIBQ15653 356 aa15.22■□□□□ 0.03
EFCAB13-201ENST00000331493 KDM5DQ9BY66 1539 aa15.22■□□□□ 0.03
EFCAB13-201ENST00000331493 CROCC2H7BZ55 1655 aa15.21■□□□□ 0.03
EFCAB13-201ENST00000331493 CARD14Q9BXL6 1004 aa15.21■□□□□ 0.03
EFCAB13-201ENST00000331493 E9PSI1 815 aa15.21■□□□□ 0.02
EFCAB13-201ENST00000331493 TNNQ9UQP3 1299 aa15.21■□□□□ 0.02
EFCAB13-201ENST00000331493 EIF3AQ14152 1382 aaKnown RBP15.21■□□□□ 0.02
EFCAB13-201ENST00000331493 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
EFCAB13-201ENST00000331493 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
EFCAB13-201ENST00000331493 MTHFSP49914 203 aa15.2■□□□□ 0.02
EFCAB13-201ENST00000331493 IGHDP01880 384 aa15.2■□□□□ 0.02
EFCAB13-201ENST00000331493 FTSJ3Q8IY81 847 aaKnown RBP15.2■□□□□ 0.02
EFCAB13-201ENST00000331493 TCP11L2Q8N4U5 519 aa15.19■□□□□ 0.02
EFCAB13-201ENST00000331493 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
EFCAB13-201ENST00000331493 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
EFCAB13-201ENST00000331493 TTC37Q6PGP7 1564 aa15.18■□□□□ 0.02
EFCAB13-201ENST00000331493 FRAT2O75474 233 aaPredicted RBP15.18■□□□□ 0.02
EFCAB13-201ENST00000331493 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
EFCAB13-201ENST00000331493 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
EFCAB13-201ENST00000331493 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 BRPF3Q9ULD4 1205 aa15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 GPRASP1Q5JY77 1395 aa15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 ERCC6L2Q5T890 1561 aa15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
EFCAB13-201ENST00000331493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
EFCAB13-201ENST00000331493 WWC1Q8IX03 1113 aa15.16■□□□□ 0.02
EFCAB13-201ENST00000331493 TSR2Q969E8 191 aaKnown RBP15.15■□□□□ 0.02
EFCAB13-201ENST00000331493 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
EFCAB13-201ENST00000331493 EIF5BO60841 1220 aaKnown RBP15.15■□□□□ 0.02
EFCAB13-201ENST00000331493 GGNBP2Q9H3C7 697 aa15.15■□□□□ 0.02
EFCAB13-201ENST00000331493 C8orf34Q49A92 452 aa15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 POGKQ9P215 609 aa15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 ARHGEF5Q12774 1597 aa15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 PLCH2O75038 1416 aa15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
EFCAB13-201ENST00000331493 GSE1Q14687 1217 aa15.12■□□□□ 0.01
EFCAB13-201ENST00000331493 SCAF11Q99590 1463 aaKnown RBP15.12■□□□□ 0.01
EFCAB13-201ENST00000331493 MINK1Q8N4C8 1332 aaPredicted RBP15.12■□□□□ 0.01
EFCAB13-201ENST00000331493 SEC24BO95487 1268 aa15.12■□□□□ 0.01
EFCAB13-201ENST00000331493 ITPRIPQ8IWB1 547 aa15.11■□□□□ 0.01
EFCAB13-201ENST00000331493 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
EFCAB13-201ENST00000331493 DUOX2Q9NRD8 1548 aa15.11■□□□□ 0.01
EFCAB13-201ENST00000331493 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
EFCAB13-201ENST00000331493 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 NSD3Q9BZ95 1437 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 GZF1Q9H116 711 aaPredicted RBP15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 RAPGEF3O95398 923 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 MFAP1P55081 439 aaKnown RBP15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.1■□□□□ 0.01
EFCAB13-201ENST00000331493 BECN1Q14457 450 aa15.09■□□□□ 0.01
EFCAB13-201ENST00000331493 ZMYM4Q5VZL5 1548 aa15.09■□□□□ 0.01
EFCAB13-201ENST00000331493 RLBP1P12271 317 aa15.09■□□□□ 0.01
EFCAB13-201ENST00000331493 PREX2Q70Z35 1606 aa15.09■□□□□ 0.01
EFCAB13-201ENST00000331493 FBLN1P23142 703 aa15.09■□□□□ 0.01
EFCAB13-201ENST00000331493 UGGT1Q9NYU2 1555 aa15.08■□□□□ 0.01
EFCAB13-201ENST00000331493 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0.01
EFCAB13-201ENST00000331493 MLECQ14165 292 aa15.08■□□□□ 0
EFCAB13-201ENST00000331493 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
EFCAB13-201ENST00000331493 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
EFCAB13-201ENST00000331493 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
EFCAB13-201ENST00000331493 PRDM15P57071 1507 aaPredicted RBP15.07■□□□□ 0
EFCAB13-201ENST00000331493 NOS1P29475 1434 aa15.06■□□□□ 0
EFCAB13-201ENST00000331493 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
EFCAB13-201ENST00000331493 RARSP54136 660 aaKnown RBP15.06■□□□□ 0
EFCAB13-201ENST00000331493 ZNF521Q96K83 1311 aa15.05■□□□□ -0
EFCAB13-201ENST00000331493 SLC24A1O60721 1099 aa15.05■□□□□ -0
EFCAB13-201ENST00000331493 EXOSC9Q06265 439 aaKnown RBP15.05■□□□□ -0
EFCAB13-201ENST00000331493 RWDD1Q9H446 243 aaPredicted RBP15.04■□□□□ -0
EFCAB13-201ENST00000331493 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
EFCAB13-201ENST00000331493 MAST1Q9Y2H9 1570 aa15.04■□□□□ -0
EFCAB13-201ENST00000331493 SOX12O15370 315 aa15.04■□□□□ -0
EFCAB13-201ENST00000331493 FANCAO15360 1455 aa15.04■□□□□ -0
EFCAB13-201ENST00000331493 ATP10AO60312 1499 aa15.04■□□□□ -0
EFCAB13-201ENST00000331493 PDE3AQ14432 1141 aa15.03■□□□□ -0
EFCAB13-201ENST00000331493 PMFBP1Q8TBY8 1022 aa15.03■□□□□ -0
EFCAB13-201ENST00000331493 ABCC2Q92887 1545 aa15.03■□□□□ -0
EFCAB13-201ENST00000331493 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms