RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 PZPP20742 1482 aa19.4■□□□□ 0.7
RGPD6-202ENST00000330331 PER1O15534 1290 aaPredicted RBP19.4■□□□□ 0.7
RGPD6-202ENST00000330331 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.7
RGPD6-202ENST00000330331 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
RGPD6-202ENST00000330331 PRDM4Q9UKN5 801 aa19.38■□□□□ 0.69
RGPD6-202ENST00000330331 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
RGPD6-202ENST00000330331 BCAR3O75815 825 aa19.38■□□□□ 0.69
RGPD6-202ENST00000330331 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
RGPD6-202ENST00000330331 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
RGPD6-202ENST00000330331 NLRP1Q9C000 1473 aa19.37■□□□□ 0.69
RGPD6-202ENST00000330331 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
RGPD6-202ENST00000330331 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
RGPD6-202ENST00000330331 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
RGPD6-202ENST00000330331 CROCC2H7BZ55 1655 aa19.36■□□□□ 0.69
RGPD6-202ENST00000330331 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
RGPD6-202ENST00000330331 E9PCH4 1651 aa19.35■□□□□ 0.69
RGPD6-202ENST00000330331 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
RGPD6-202ENST00000330331 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
RGPD6-202ENST00000330331 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
RGPD6-202ENST00000330331 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
RGPD6-202ENST00000330331 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
RGPD6-202ENST00000330331 ARHGAP5Q13017 1502 aa19.33■□□□□ 0.69
RGPD6-202ENST00000330331 MAPK8IP3Q9UPT6 1336 aa19.32■□□□□ 0.68
RGPD6-202ENST00000330331 UHRF1BP1Q6BDS2 1440 aa19.32■□□□□ 0.68
RGPD6-202ENST00000330331 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
RGPD6-202ENST00000330331 ADGBQ8N7X0 1667 aa19.31■□□□□ 0.68
RGPD6-202ENST00000330331 EIF3AQ14152 1382 aaKnown RBP19.31■□□□□ 0.68
RGPD6-202ENST00000330331 PANK3Q9H999 370 aa19.31■□□□□ 0.68
RGPD6-202ENST00000330331 CHMP5Q9NZZ3 219 aa19.31■□□□□ 0.68
RGPD6-202ENST00000330331 GAS2L3Q86XJ1 694 aa19.3■□□□□ 0.68
RGPD6-202ENST00000330331 ASXL2Q76L83 1435 aa19.3■□□□□ 0.68
RGPD6-202ENST00000330331 NPM1P06748 294 aaKnown RBP eCLIP19.3■□□□□ 0.68
RGPD6-202ENST00000330331 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
RGPD6-202ENST00000330331 WDR43Q15061 677 aaKnown RBP eCLIP19.29■□□□□ 0.68
RGPD6-202ENST00000330331 SPINK5Q9NQ38 1064 aaPredicted RBP19.29■□□□□ 0.68
RGPD6-202ENST00000330331 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
RGPD6-202ENST00000330331 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
RGPD6-202ENST00000330331 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
RGPD6-202ENST00000330331 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
RGPD6-202ENST00000330331 PLCH2O75038 1416 aa19.29■□□□□ 0.68
RGPD6-202ENST00000330331 INSRP06213 1382 aa19.28■□□□□ 0.68
RGPD6-202ENST00000330331 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
RGPD6-202ENST00000330331 ARHGEF5Q12774 1597 aa19.28■□□□□ 0.68
RGPD6-202ENST00000330331 ARID3AQ99856 593 aa19.28■□□□□ 0.68
RGPD6-202ENST00000330331 PANK1Q8TE04 598 aa19.27■□□□□ 0.67
RGPD6-202ENST00000330331 ZNF521Q96K83 1311 aa19.27■□□□□ 0.67
RGPD6-202ENST00000330331 RIPK4P57078 832 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 AAMPQ13685 434 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 CCDC146Q8IYE0 955 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 FAM13BQ9NYF5 915 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 ADGRL2O95490 1459 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
RGPD6-202ENST00000330331 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
RGPD6-202ENST00000330331 SHANK2Q9UPX8 1470 aa19.25■□□□□ 0.67
RGPD6-202ENST00000330331 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
RGPD6-202ENST00000330331 C9orf84Q5VXU9 1444 aa19.24■□□□□ 0.67
RGPD6-202ENST00000330331 CYB5RLQ6IPT4 315 aa19.24■□□□□ 0.67
RGPD6-202ENST00000330331 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
RGPD6-202ENST00000330331 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
RGPD6-202ENST00000330331 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
RGPD6-202ENST00000330331 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
RGPD6-202ENST00000330331 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
RGPD6-202ENST00000330331 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
RGPD6-202ENST00000330331 ANKRD30AQ9BXX3 1397 aa19.22■□□□□ 0.67
RGPD6-202ENST00000330331 EFCAB2Q5VUJ9 269 aa19.22■□□□□ 0.67
RGPD6-202ENST00000330331 ARAP3Q8WWN8 1544 aa19.21■□□□□ 0.67
RGPD6-202ENST00000330331 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
RGPD6-202ENST00000330331 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
RGPD6-202ENST00000330331 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
RGPD6-202ENST00000330331 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
RGPD6-202ENST00000330331 MFAP1P55081 439 aaKnown RBP19.2■□□□□ 0.66
RGPD6-202ENST00000330331 PDZRN3Q9UPQ7 1066 aa19.2■□□□□ 0.66
RGPD6-202ENST00000330331 OFD1O75665 1012 aa19.2■□□□□ 0.66
RGPD6-202ENST00000330331 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
RGPD6-202ENST00000330331 ARHGEF12Q9NZN5 1544 aa19.19■□□□□ 0.66
RGPD6-202ENST00000330331 C22orf23Q9BZE7 217 aa19.19■□□□□ 0.66
RGPD6-202ENST00000330331 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
RGPD6-202ENST00000330331 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
RGPD6-202ENST00000330331 ABCC1P33527 1531 aa19.18■□□□□ 0.66
RGPD6-202ENST00000330331 APAF1O14727 1248 aa19.17■□□□□ 0.66
RGPD6-202ENST00000330331 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
RGPD6-202ENST00000330331 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
RGPD6-202ENST00000330331 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
RGPD6-202ENST00000330331 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
RGPD6-202ENST00000330331 NKTRP30414 1462 aaKnown RBP19.16■□□□□ 0.66
RGPD6-202ENST00000330331 MSNP26038 577 aaKnown RBP19.16■□□□□ 0.66
RGPD6-202ENST00000330331 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
RGPD6-202ENST00000330331 NUP155O75694 1391 aa19.15■□□□□ 0.66
RGPD6-202ENST00000330331 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
RGPD6-202ENST00000330331 TNPO1Q92973 898 aaKnown RBP19.15■□□□□ 0.66
RGPD6-202ENST00000330331 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
RGPD6-202ENST00000330331 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
RGPD6-202ENST00000330331 HSCBQ8IWL3 235 aa19.15■□□□□ 0.66
RGPD6-202ENST00000330331 FANCAO15360 1455 aa19.14■□□□□ 0.66
RGPD6-202ENST00000330331 MAST1Q9Y2H9 1570 aa19.14■□□□□ 0.65
RGPD6-202ENST00000330331 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
RGPD6-202ENST00000330331 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
RGPD6-202ENST00000330331 CCDC173Q0VFZ6 552 aa19.14■□□□□ 0.65
RGPD6-202ENST00000330331 FGD1P98174 961 aa19.13■□□□□ 0.65
RGPD6-202ENST00000330331 TESK2Q96S53 571 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms