RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 TMEM134Q9H6X4 195 aa8.95□□□□□ -0.98
SKP1-201ENST00000328392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.91□□□□□ -0.98
SKP1-201ENST00000328392 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
SKP1-201ENST00000328392 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
SKP1-201ENST00000328392 IRF6O14896 467 aa8.9□□□□□ -0.98
SKP1-201ENST00000328392 APLP1P51693 650 aa8.9□□□□□ -0.98
SKP1-201ENST00000328392 MAP2K5Q13163 448 aa8.9□□□□□ -0.98
SKP1-201ENST00000328392 NYAP1Q6ZVC0 841 aa8.89□□□□□ -0.99
SKP1-201ENST00000328392 SLC10A3P09131 477 aa8.88□□□□□ -0.99
SKP1-201ENST00000328392 MINK1Q8N4C8 1332 aaPredicted RBP8.87□□□□□ -0.99
SKP1-201ENST00000328392 ZMYND10O75800 440 aa8.87□□□□□ -0.99
SKP1-201ENST00000328392 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
SKP1-201ENST00000328392 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
SKP1-201ENST00000328392 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
SKP1-201ENST00000328392 SLC4A3P48751 1232 aa8.84□□□□□ -0.99
SKP1-201ENST00000328392 TJAP1Q5JTD0 557 aa8.84□□□□□ -0.99
SKP1-201ENST00000328392 DAXXQ9UER7 740 aaPredicted RBP8.84□□□□□ -0.99
SKP1-201ENST00000328392 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
SKP1-201ENST00000328392 MTRQ99707 1265 aa8.83□□□□□ -1
SKP1-201ENST00000328392 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
SKP1-201ENST00000328392 CFHP08603 1231 aa8.82□□□□□ -1
SKP1-201ENST00000328392 ZNF516Q92618 1163 aa8.82□□□□□ -1
SKP1-201ENST00000328392 COPS2P61201 443 aa8.81□□□□□ -1
SKP1-201ENST00000328392 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
SKP1-201ENST00000328392 KCNC4Q03721 635 aa8.81□□□□□ -1
SKP1-201ENST00000328392 IFFO2Q5TF58 517 aa8.81□□□□□ -1
SKP1-201ENST00000328392 NECTIN2Q92692 538 aa8.81□□□□□ -1
SKP1-201ENST00000328392 BLOC1S3Q6QNY0 202 aa8.79□□□□□ -1
SKP1-201ENST00000328392 RDH13Q8NBN7 331 aa8.79□□□□□ -1
SKP1-201ENST00000328392 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
SKP1-201ENST00000328392 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
SKP1-201ENST00000328392 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
SKP1-201ENST00000328392 IL21Q9HBE4 155 aa8.78□□□□□ -1
SKP1-201ENST00000328392 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
SKP1-201ENST00000328392 A0A0G2JS52 829 aa8.77□□□□□ -1.01
SKP1-201ENST00000328392 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
SKP1-201ENST00000328392 PRR14Q9BWN1 585 aa8.76□□□□□ -1.01
SKP1-201ENST00000328392 GCGRP47871 477 aa8.75□□□□□ -1.01
SKP1-201ENST00000328392 PUS10Q3MIT2 529 aaKnown RBP8.75□□□□□ -1.01
SKP1-201ENST00000328392 TMUB1Q9BVT8 246 aa8.75□□□□□ -1.01
SKP1-201ENST00000328392 RSPH4AQ5TD94 716 aa8.74□□□□□ -1.01
SKP1-201ENST00000328392 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
SKP1-201ENST00000328392 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
SKP1-201ENST00000328392 ZPR1O75312 459 aa8.73□□□□□ -1.01
SKP1-201ENST00000328392 CD46P15529 392 aa8.73□□□□□ -1.01
SKP1-201ENST00000328392 FUT2Q10981 343 aa8.73□□□□□ -1.01
SKP1-201ENST00000328392 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
SKP1-201ENST00000328392 TRIM66O15016 1216 aa8.72□□□□□ -1.01
SKP1-201ENST00000328392 TLL1O43897 1013 aa8.72□□□□□ -1.01
SKP1-201ENST00000328392 CLCN1P35523 988 aa8.72□□□□□ -1.01
SKP1-201ENST00000328392 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
SKP1-201ENST00000328392 AK7Q96M32 723 aa8.71□□□□□ -1.02
SKP1-201ENST00000328392 AMHR2Q16671 573 aa8.7□□□□□ -1.02
SKP1-201ENST00000328392 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
SKP1-201ENST00000328392 MORN1Q5T089 497 aa8.69□□□□□ -1.02
SKP1-201ENST00000328392 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
SKP1-201ENST00000328392 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
SKP1-201ENST00000328392 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
SKP1-201ENST00000328392 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
SKP1-201ENST00000328392 NR1I2O75469 434 aa8.67□□□□□ -1.02
SKP1-201ENST00000328392 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
SKP1-201ENST00000328392 PARP9Q8IXQ6 854 aa8.67□□□□□ -1.02
SKP1-201ENST00000328392 HLA-CQ95604 372 aa8.67□□□□□ -1.02
SKP1-201ENST00000328392 KDM4AO75164 1064 aa8.66□□□□□ -1.02
SKP1-201ENST00000328392 SLC27A5Q9Y2P5 690 aa8.66□□□□□ -1.02
SKP1-201ENST00000328392 PDE4DQ08499 809 aa8.64□□□□□ -1.03
SKP1-201ENST00000328392 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
SKP1-201ENST00000328392 ADH1BP00325 375 aa8.63□□□□□ -1.03
SKP1-201ENST00000328392 MS4A1P11836 297 aa8.63□□□□□ -1.03
SKP1-201ENST00000328392 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
SKP1-201ENST00000328392 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
SKP1-201ENST00000328392 S1PR4O95977 384 aa8.62□□□□□ -1.03
SKP1-201ENST00000328392 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
SKP1-201ENST00000328392 SPSB2Q99619 263 aa8.62□□□□□ -1.03
SKP1-201ENST00000328392 PPEF1O14829 653 aaPredicted RBP8.61□□□□□ -1.03
SKP1-201ENST00000328392 HOXA2O43364 376 aa8.61□□□□□ -1.03
SKP1-201ENST00000328392 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 GRIPAP1Q4V328 841 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
SKP1-201ENST00000328392 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
SKP1-201ENST00000328392 RGS20O76081 388 aa8.59□□□□□ -1.03
SKP1-201ENST00000328392 USP46P62068 366 aa8.59□□□□□ -1.03
SKP1-201ENST00000328392 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
SKP1-201ENST00000328392 GGCXP38435 758 aa8.58□□□□□ -1.04
SKP1-201ENST00000328392 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
SKP1-201ENST00000328392 NDUFV2P19404 249 aa8.57□□□□□ -1.04
SKP1-201ENST00000328392 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
SKP1-201ENST00000328392 PRKD2Q9BZL6 878 aa8.57□□□□□ -1.04
SKP1-201ENST00000328392 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
SKP1-201ENST00000328392 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
SKP1-201ENST00000328392 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SKP1-201ENST00000328392 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
SKP1-201ENST00000328392 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
SKP1-201ENST00000328392 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
SKP1-201ENST00000328392 GPBP1L1Q9HC44 474 aaPredicted RBP8.55□□□□□ -1.04
SKP1-201ENST00000328392 FDX1P10109 184 aa8.54□□□□□ -1.04
SKP1-201ENST00000328392 Q3C1V9 767 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms