RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 SLC24A1O60721 1099 aa26.45■■□□□ 1.82
CHMP6-201ENST00000325167 SCAF11Q99590 1463 aaKnown RBP26.45■■□□□ 1.82
CHMP6-201ENST00000325167 TMF1P82094 1093 aa26.44■■□□□ 1.82
CHMP6-201ENST00000325167 EIF3AQ14152 1382 aaKnown RBP26.44■■□□□ 1.82
CHMP6-201ENST00000325167 IQGAP1P46940 1657 aa26.44■■□□□ 1.82
CHMP6-201ENST00000325167 REREQ9P2R6 1566 aa26.44■■□□□ 1.82
CHMP6-201ENST00000325167 RPGRIP1LQ68CZ1 1315 aa26.43■■□□□ 1.82
CHMP6-201ENST00000325167 NOS1P29475 1434 aa26.43■■□□□ 1.82
CHMP6-201ENST00000325167 TESK2Q96S53 571 aa26.42■■□□□ 1.82
CHMP6-201ENST00000325167 IFT172Q9UG01 1749 aa26.42■■□□□ 1.82
CHMP6-201ENST00000325167 UGGT1Q9NYU2 1555 aa26.42■■□□□ 1.82
CHMP6-201ENST00000325167 NRXN1Q9ULB1 1477 aa26.4■■□□□ 1.82
CHMP6-201ENST00000325167 CDCA8Q53HL2 280 aa26.39■■□□□ 1.82
CHMP6-201ENST00000325167 MRS2Q9HD23 443 aa26.38■■□□□ 1.81
CHMP6-201ENST00000325167 PPP6R1Q9UPN7 881 aa26.38■■□□□ 1.81
CHMP6-201ENST00000325167 AGLP35573 1532 aa26.37■■□□□ 1.81
CHMP6-201ENST00000325167 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
CHMP6-201ENST00000325167 MROH2AA6NES4 1674 aa26.36■■□□□ 1.81
CHMP6-201ENST00000325167 RALBP1Q15311 655 aa26.35■■□□□ 1.81
CHMP6-201ENST00000325167 PIK3C2BO00750 1634 aa26.34■■□□□ 1.81
CHMP6-201ENST00000325167 SETBP1Q9Y6X0 1596 aa26.32■■□□□ 1.8
CHMP6-201ENST00000325167 CEBPAP49715 358 aaPredicted RBP26.31■■□□□ 1.8
CHMP6-201ENST00000325167 SLC52A1Q9NWF4 448 aa26.31■■□□□ 1.8
CHMP6-201ENST00000325167 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
CHMP6-201ENST00000325167 HNRNPUQ00839 825 aaKnown RBP eCLIP26.29■■□□□ 1.8
CHMP6-201ENST00000325167 PPLO60437 1756 aa26.29■■□□□ 1.8
CHMP6-201ENST00000325167 ADGRF5Q8IZF2 1346 aa26.28■■□□□ 1.8
CHMP6-201ENST00000325167 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
CHMP6-201ENST00000325167 SYNMO15061 1565 aa26.28■■□□□ 1.8
CHMP6-201ENST00000325167 HSPA2P54652 639 aa26.27■■□□□ 1.8
CHMP6-201ENST00000325167 PIK3C2GO75747 1445 aa26.26■■□□□ 1.79
CHMP6-201ENST00000325167 MYBBP1AQ9BQG0 1328 aaKnown RBP26.25■■□□□ 1.79
CHMP6-201ENST00000325167 CCDC184Q52MB2 194 aa26.24■■□□□ 1.79
CHMP6-201ENST00000325167 CFAP70Q5T0N1 1121 aa26.24■■□□□ 1.79
CHMP6-201ENST00000325167 BRD4O60885 1362 aaPredicted RBP26.24■■□□□ 1.79
CHMP6-201ENST00000325167 VGFO15240 615 aaPredicted RBP26.22■■□□□ 1.79
CHMP6-201ENST00000325167 SBNO2Q9Y2G9 1366 aa26.22■■□□□ 1.79
CHMP6-201ENST00000325167 C14orf93Q9H972 538 aaKnown RBP26.21■■□□□ 1.79
CHMP6-201ENST00000325167 ZFYVE9O95405 1425 aa26.21■■□□□ 1.79
CHMP6-201ENST00000325167 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
CHMP6-201ENST00000325167 PREX1Q8TCU6 1659 aa26.21■■□□□ 1.79
CHMP6-201ENST00000325167 CFAP65Q6ZU64 1925 aaKnown RBP26.2■■□□□ 1.78
CHMP6-201ENST00000325167 PARD3Q8TEW0 1356 aa26.2■■□□□ 1.78
CHMP6-201ENST00000325167 PER1O15534 1290 aaPredicted RBP26.2■■□□□ 1.78
CHMP6-201ENST00000325167 FAM9BQ8IZU0 186 aa26.2■■□□□ 1.78
CHMP6-201ENST00000325167 ESF1Q9H501 851 aaKnown RBP26.2■■□□□ 1.78
CHMP6-201ENST00000325167 C3P01024 1663 aa26.19■■□□□ 1.78
CHMP6-201ENST00000325167 TMC1Q8TDI8 760 aa26.19■■□□□ 1.78
CHMP6-201ENST00000325167 ZBED9Q6R2W3 1325 aa26.17■■□□□ 1.78
CHMP6-201ENST00000325167 NEXMIFQ5QGS0 1516 aa26.17■■□□□ 1.78
CHMP6-201ENST00000325167 PANK3Q9H999 370 aa26.16■■□□□ 1.78
CHMP6-201ENST00000325167 NLRP13Q86W25 1043 aa26.15■■□□□ 1.78
CHMP6-201ENST00000325167 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
CHMP6-201ENST00000325167 ERVK-7P63135 1459 aa26.14■■□□□ 1.78
CHMP6-201ENST00000325167 IDI1Q13907 227 aa26.14■■□□□ 1.78
CHMP6-201ENST00000325167 ILDR1Q86SU0 546 aaPredicted RBP26.13■■□□□ 1.77
CHMP6-201ENST00000325167 NEFLP07196 543 aa26.12■■□□□ 1.77
CHMP6-201ENST00000325167 ADGRB1O14514 1584 aa26.12■■□□□ 1.77
CHMP6-201ENST00000325167 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
CHMP6-201ENST00000325167 SUPT16HQ9Y5B9 1047 aaKnown RBP26.1■■□□□ 1.77
CHMP6-201ENST00000325167 TMEM131LA2VDJ0 1609 aa26.1■■□□□ 1.77
CHMP6-201ENST00000325167 CENPJQ9HC77 1338 aaPredicted RBP26.1■■□□□ 1.77
CHMP6-201ENST00000325167 NPC1L1Q9UHC9 1359 aa26.08■■□□□ 1.77
CHMP6-201ENST00000325167 CLTCQ00610 1675 aaKnown RBP26.08■■□□□ 1.77
CHMP6-201ENST00000325167 KNSTRNQ9Y448 316 aa26.08■■□□□ 1.77
CHMP6-201ENST00000325167 INSRP06213 1382 aa26.06■■□□□ 1.76
CHMP6-201ENST00000325167 LRPPRCP42704 1394 aaKnown RBP26.06■■□□□ 1.76
CHMP6-201ENST00000325167 SPATA31D1Q6ZQQ2 1576 aa26.06■■□□□ 1.76
CHMP6-201ENST00000325167 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
CHMP6-201ENST00000325167 CNGB1Q14028 1251 aaPredicted RBP26.06■■□□□ 1.76
CHMP6-201ENST00000325167 ZMYM3Q14202 1370 aa26.04■■□□□ 1.76
CHMP6-201ENST00000325167 PUS7Q96PZ0 661 aaKnown RBP26.03■■□□□ 1.76
CHMP6-201ENST00000325167 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
CHMP6-201ENST00000325167 MYOM1P52179 1685 aa26.02■■□□□ 1.76
CHMP6-201ENST00000325167 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
CHMP6-201ENST00000325167 QRICH2Q9H0J4 1663 aa25.98■■□□□ 1.75
CHMP6-201ENST00000325167 CC2D1BQ5T0F9 858 aaKnown RBP25.98■■□□□ 1.75
CHMP6-201ENST00000325167 TRAK1Q9UPV9 953 aa25.98■■□□□ 1.75
CHMP6-201ENST00000325167 FBXO31Q5XUX0 539 aaPredicted RBP25.97■■□□□ 1.75
CHMP6-201ENST00000325167 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
CHMP6-201ENST00000325167 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
CHMP6-201ENST00000325167 AMER1Q5JTC6 1135 aaPredicted RBP25.96■■□□□ 1.75
CHMP6-201ENST00000325167 MYO5BQ9ULV0 1848 aa25.95■■□□□ 1.74
CHMP6-201ENST00000325167 FKBP8Q14318 412 aa25.93■■□□□ 1.74
CHMP6-201ENST00000325167 TMEM132EQ6IEE7 984 aa25.93■■□□□ 1.74
CHMP6-201ENST00000325167 ARHGEF28Q8N1W1 1705 aaKnown RBP25.93■■□□□ 1.74
CHMP6-201ENST00000325167 EVC2Q86UK5 1308 aa25.91■■□□□ 1.74
CHMP6-201ENST00000325167 A2ML1A8K2U0 1454 aa25.9■■□□□ 1.74
CHMP6-201ENST00000325167 SMG6Q86US8 1419 aaKnown RBP25.9■■□□□ 1.74
CHMP6-201ENST00000325167 ERICH6BQ5W0A0 696 aa25.89■■□□□ 1.73
CHMP6-201ENST00000325167 NUTM2DQ5VT03 806 aaPredicted RBP25.87■■□□□ 1.73
CHMP6-201ENST00000325167 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.87■■□□□ 1.73
CHMP6-201ENST00000325167 NINLQ9Y2I6 1382 aa25.86■■□□□ 1.73
CHMP6-201ENST00000325167 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
CHMP6-201ENST00000325167 RIMS2Q9UQ26 1411 aa25.85■■□□□ 1.73
CHMP6-201ENST00000325167 ALKQ9UM73 1620 aa25.84■■□□□ 1.73
CHMP6-201ENST00000325167 PPP2R1AP30153 589 aa25.84■■□□□ 1.73
CHMP6-201ENST00000325167 FBXO41Q8TF61 875 aa25.83■■□□□ 1.73
CHMP6-201ENST00000325167 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.73
CHMP6-201ENST00000325167 NUDCQ9Y266 331 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms