RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 PRM3Q9NNZ6 103 aa21.53■■□□□ 1.04
VPS37A-201ENST00000324849 FOXD4L1Q9NU39 408 aa21.53■■□□□ 1.04
VPS37A-201ENST00000324849 DDX19BQ9UMR2 479 aa21.53■■□□□ 1.04
VPS37A-201ENST00000324849 G3BP1Q13283 466 aaKnown RBP eCLIP21.53■■□□□ 1.04
VPS37A-201ENST00000324849 TPM3P06753 285 aa21.52■■□□□ 1.04
VPS37A-201ENST00000324849 IGF1RP08069 1367 aa21.52■■□□□ 1.03
VPS37A-201ENST00000324849 APPP05067 770 aa21.52■■□□□ 1.03
VPS37A-201ENST00000324849 RAD21O60216 631 aa21.51■■□□□ 1.03
VPS37A-201ENST00000324849 TCEAL9Q9UHQ7 104 aa21.51■■□□□ 1.03
VPS37A-201ENST00000324849 NLRP6P59044 892 aa21.51■■□□□ 1.03
VPS37A-201ENST00000324849 NECTIN2Q92692 538 aa21.51■■□□□ 1.03
VPS37A-201ENST00000324849 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
VPS37A-201ENST00000324849 GNAI1P63096 354 aa21.5■■□□□ 1.03
VPS37A-201ENST00000324849 TRDNQ13061 729 aa21.5■■□□□ 1.03
VPS37A-201ENST00000324849 REC8O95072 547 aa21.5■■□□□ 1.03
VPS37A-201ENST00000324849 AMER1Q5JTC6 1135 aaPredicted RBP21.49■■□□□ 1.03
VPS37A-201ENST00000324849 TSPYL4Q9UJ04 414 aa21.49■■□□□ 1.03
VPS37A-201ENST00000324849 HSP90AB4PQ58FF6 505 aa21.49■■□□□ 1.03
VPS37A-201ENST00000324849 TPD52L1Q16890 204 aaPredicted RBP21.48■■□□□ 1.03
VPS37A-201ENST00000324849 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
VPS37A-201ENST00000324849 MIA2Q96PC5 1412 aa21.48■■□□□ 1.03
VPS37A-201ENST00000324849 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
VPS37A-201ENST00000324849 GOLGA6L3A6NEY3 463 aa21.48■■□□□ 1.03
VPS37A-201ENST00000324849 PES1O00541 588 aaKnown RBP21.48■■□□□ 1.03
VPS37A-201ENST00000324849 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
VPS37A-201ENST00000324849 TRIM29Q14134 588 aa21.47■■□□□ 1.03
VPS37A-201ENST00000324849 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
VPS37A-201ENST00000324849 CPLX1O14810 134 aa21.47■■□□□ 1.03
VPS37A-201ENST00000324849 RUNDC1Q96C34 613 aa21.47■■□□□ 1.03
VPS37A-201ENST00000324849 DHX16O60231 1041 aaKnown RBP21.46■■□□□ 1.03
VPS37A-201ENST00000324849 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
VPS37A-201ENST00000324849 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
VPS37A-201ENST00000324849 TSR1Q2NL82 804 aaKnown RBP21.46■■□□□ 1.03
VPS37A-201ENST00000324849 PDE4CQ08493 712 aa21.46■■□□□ 1.03
VPS37A-201ENST00000324849 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
VPS37A-201ENST00000324849 FBXW7Q969H0 707 aa21.45■■□□□ 1.02
VPS37A-201ENST00000324849 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
VPS37A-201ENST00000324849 RNF20Q5VTR2 975 aa21.45■■□□□ 1.02
VPS37A-201ENST00000324849 TXNDC2Q86VQ3 553 aa21.45■■□□□ 1.02
VPS37A-201ENST00000324849 KLHL34Q8N239 644 aa21.45■■□□□ 1.02
VPS37A-201ENST00000324849 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
VPS37A-201ENST00000324849 DEKP35659 375 aaKnown RBP21.45■■□□□ 1.02
VPS37A-201ENST00000324849 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
VPS37A-201ENST00000324849 FOXD4L5Q5VV16 416 aaPredicted RBP21.44■■□□□ 1.02
VPS37A-201ENST00000324849 PROSER2Q86WR7 435 aaPredicted RBP21.44■■□□□ 1.02
VPS37A-201ENST00000324849 FOXD4L4Q8WXT5 416 aaPredicted RBP21.44■■□□□ 1.02
VPS37A-201ENST00000324849 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
VPS37A-201ENST00000324849 MCTP1Q6DN14 999 aa21.44■■□□□ 1.02
VPS37A-201ENST00000324849 RIC3Q7Z5B4 369 aa21.44■■□□□ 1.02
VPS37A-201ENST00000324849 GGNBP2Q9H3C7 697 aa21.44■■□□□ 1.02
VPS37A-201ENST00000324849 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
VPS37A-201ENST00000324849 PLIN1O60240 522 aa21.43■■□□□ 1.02
VPS37A-201ENST00000324849 A0A0U1RQG5 324 aaPredicted RBP21.42■■□□□ 1.02
VPS37A-201ENST00000324849 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
VPS37A-201ENST00000324849 HMOX1P09601 288 aa21.41■■□□□ 1.02
VPS37A-201ENST00000324849 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
VPS37A-201ENST00000324849 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
VPS37A-201ENST00000324849 TPM2P07951 284 aa21.41■■□□□ 1.02
VPS37A-201ENST00000324849 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
VPS37A-201ENST00000324849 CCDC47Q96A33 483 aaKnown RBP21.41■■□□□ 1.02
VPS37A-201ENST00000324849 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
VPS37A-201ENST00000324849 BECN2A8MW95 431 aa21.4■■□□□ 1.02
VPS37A-201ENST00000324849 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
VPS37A-201ENST00000324849 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
VPS37A-201ENST00000324849 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
VPS37A-201ENST00000324849 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
VPS37A-201ENST00000324849 ERICH2A1L162 156 aa21.39■■□□□ 1.02
VPS37A-201ENST00000324849 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.01
VPS37A-201ENST00000324849 TPM1P09493 284 aa21.39■■□□□ 1.01
VPS37A-201ENST00000324849 THEMISQ8N1K5 641 aaPredicted RBP21.39■■□□□ 1.01
VPS37A-201ENST00000324849 GOLGA6L19H0YKK7 550 aa21.39■■□□□ 1.01
VPS37A-201ENST00000324849 ERC2O15083 957 aa21.39■■□□□ 1.01
VPS37A-201ENST00000324849 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
VPS37A-201ENST00000324849 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
VPS37A-201ENST00000324849 ABTB2Q8N961 1025 aa21.38■■□□□ 1.01
VPS37A-201ENST00000324849 USP35Q9P2H5 1018 aa21.38■■□□□ 1.01
VPS37A-201ENST00000324849 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
VPS37A-201ENST00000324849 CRBNQ96SW2 442 aa21.38■■□□□ 1.01
VPS37A-201ENST00000324849 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
VPS37A-201ENST00000324849 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
VPS37A-201ENST00000324849 ANO2Q9NQ90 1003 aa21.36■■□□□ 1.01
VPS37A-201ENST00000324849 EXOC6Q8TAG9 804 aa21.36■■□□□ 1.01
VPS37A-201ENST00000324849 GOLGA6L1Q8N7Z2 621 aa21.36■■□□□ 1.01
VPS37A-201ENST00000324849 NEUROD6Q96NK8 337 aa21.36■■□□□ 1.01
VPS37A-201ENST00000324849 DDX49Q9Y6V7 483 aaKnown RBP21.36■■□□□ 1.01
VPS37A-201ENST00000324849 FGD6Q6ZV73 1430 aa21.35■■□□□ 1.01
VPS37A-201ENST00000324849 NFXL1Q6ZNB6 911 aa21.35■■□□□ 1.01
VPS37A-201ENST00000324849 GAS2L2Q8NHY3 880 aa21.34■■□□□ 1.01
VPS37A-201ENST00000324849 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
VPS37A-201ENST00000324849 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
VPS37A-201ENST00000324849 CCDC43Q96MW1 224 aaKnown RBP21.33■■□□□ 1.01
VPS37A-201ENST00000324849 RALYLQ86SE5 291 aaKnown RBP21.33■■□□□ 1
VPS37A-201ENST00000324849 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
VPS37A-201ENST00000324849 ANKRD20A12PQ8NF67 263 aa21.32■■□□□ 1
VPS37A-201ENST00000324849 PDE4AP27815 886 aa21.32■■□□□ 1
VPS37A-201ENST00000324849 FOXD4L6Q3SYB3 417 aaPredicted RBP21.31■■□□□ 1
VPS37A-201ENST00000324849 FOXD4L3Q6VB84 417 aaPredicted RBP21.31■■□□□ 1
VPS37A-201ENST00000324849 CFAP70Q5T0N1 1121 aa21.31■■□□□ 1
VPS37A-201ENST00000324849 SAFBQ15424 915 aaKnown RBP eCLIP21.3■■□□□ 1
VPS37A-201ENST00000324849 SKOR2Q2VWA4 1001 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms