RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 NECTIN2Q92692 538 aa15.07■□□□□ 0
DDR1-223ENST00000324771 COG3Q96JB2 828 aa15.07■□□□□ 0
DDR1-223ENST00000324771 E9PSI1 815 aa15.06■□□□□ 0
DDR1-223ENST00000324771 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
DDR1-223ENST00000324771 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
DDR1-223ENST00000324771 CABP1Q9NZU7 370 aa15.06■□□□□ 0
DDR1-223ENST00000324771 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ 0
DDR1-223ENST00000324771 PDE4AP27815 886 aa15.05■□□□□ 0
DDR1-223ENST00000324771 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
DDR1-223ENST00000324771 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
DDR1-223ENST00000324771 MS4A1P11836 297 aa15.05■□□□□ -0
DDR1-223ENST00000324771 BCAR3O75815 825 aa15.05■□□□□ -0
DDR1-223ENST00000324771 PMFBP1Q8TBY8 1022 aa15.05■□□□□ -0
DDR1-223ENST00000324771 TAOK2Q9UL54 1235 aa15.05■□□□□ -0
DDR1-223ENST00000324771 ERBINQ96RT1 1412 aa15.04■□□□□ -0
DDR1-223ENST00000324771 OS9Q13438 667 aaPredicted RBP15.04■□□□□ -0
DDR1-223ENST00000324771 CSB-PGBD3P0DP91 1061 aa15.04■□□□□ -0
DDR1-223ENST00000324771 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
DDR1-223ENST00000324771 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
DDR1-223ENST00000324771 IDI1Q13907 227 aa15.03■□□□□ -0
DDR1-223ENST00000324771 RWDD1Q9H446 243 aaPredicted RBP15.03■□□□□ -0
DDR1-223ENST00000324771 MFAP1P55081 439 aaKnown RBP15.03■□□□□ -0
DDR1-223ENST00000324771 ANO8Q9HCE9 1232 aaPredicted RBP15.02■□□□□ -0
DDR1-223ENST00000324771 NCLP19338 710 aaKnown RBP15.02■□□□□ -0
DDR1-223ENST00000324771 TSR2Q969E8 191 aaKnown RBP15.02■□□□□ -0
DDR1-223ENST00000324771 CD109Q6YHK3 1445 aa15.01□□□□□ -0.01
DDR1-223ENST00000324771 RUNDC1Q96C34 613 aa15.01□□□□□ -0.01
DDR1-223ENST00000324771 FBLN1P23142 703 aa15.01□□□□□ -0.01
DDR1-223ENST00000324771 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
DDR1-223ENST00000324771 CEBPAP49715 358 aaPredicted RBP14.99□□□□□ -0.01
DDR1-223ENST00000324771 CDK19Q9BWU1 502 aa14.99□□□□□ -0.01
DDR1-223ENST00000324771 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
DDR1-223ENST00000324771 KIF14Q15058 1648 aa14.99□□□□□ -0.01
DDR1-223ENST00000324771 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
DDR1-223ENST00000324771 IPO9Q96P70 1041 aaKnown RBP14.98□□□□□ -0.01
DDR1-223ENST00000324771 RAPGEF6Q8TEU7 1601 aa14.98□□□□□ -0.01
DDR1-223ENST00000324771 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
DDR1-223ENST00000324771 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
DDR1-223ENST00000324771 DISP3Q9P2K9 1392 aa14.97□□□□□ -0.01
DDR1-223ENST00000324771 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
DDR1-223ENST00000324771 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
DDR1-223ENST00000324771 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
DDR1-223ENST00000324771 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
DDR1-223ENST00000324771 CTTNBP2Q8WZ74 1663 aa14.96□□□□□ -0.01
DDR1-223ENST00000324771 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
DDR1-223ENST00000324771 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
DDR1-223ENST00000324771 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.02
DDR1-223ENST00000324771 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
DDR1-223ENST00000324771 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
DDR1-223ENST00000324771 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
DDR1-223ENST00000324771 STK31Q9BXU1 1019 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 WDR62O43379 1518 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
DDR1-223ENST00000324771 NLRP6P59044 892 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 FANCAO15360 1455 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 EIF2S2P20042 333 aaKnown RBP14.94□□□□□ -0.02
DDR1-223ENST00000324771 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
DDR1-223ENST00000324771 CENPQQ7L2Z9 268 aaPredicted RBP14.94□□□□□ -0.02
DDR1-223ENST00000324771 THUMPD2Q9BTF0 503 aaKnown RBP14.94□□□□□ -0.02
DDR1-223ENST00000324771 KIAA0556O60303 1618 aa14.93□□□□□ -0.02
DDR1-223ENST00000324771 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
DDR1-223ENST00000324771 GZF1Q9H116 711 aaPredicted RBP14.93□□□□□ -0.02
DDR1-223ENST00000324771 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
DDR1-223ENST00000324771 NGEFQ8N5V2 710 aa14.92□□□□□ -0.02
DDR1-223ENST00000324771 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
DDR1-223ENST00000324771 CASC1Q6TDU7 716 aa14.91□□□□□ -0.02
DDR1-223ENST00000324771 CHMP4BQ9H444 224 aaKnown RBP14.91□□□□□ -0.02
DDR1-223ENST00000324771 ANP32BQ92688 251 aaKnown RBP14.91□□□□□ -0.02
DDR1-223ENST00000324771 PSME1Q06323 249 aa14.9□□□□□ -0.02
DDR1-223ENST00000324771 LNPKQ9C0E8 428 aa14.9□□□□□ -0.02
DDR1-223ENST00000324771 KCNJ4P48050 445 aa14.9□□□□□ -0.02
DDR1-223ENST00000324771 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
DDR1-223ENST00000324771 NSD3Q9BZ95 1437 aa14.89□□□□□ -0.03
DDR1-223ENST00000324771 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
DDR1-223ENST00000324771 XPCQ01831 940 aaPredicted RBP14.89□□□□□ -0.03
DDR1-223ENST00000324771 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDR1-223ENST00000324771 C1orf115Q9H7X2 142 aa14.89□□□□□ -0.03
DDR1-223ENST00000324771 NOS1P29475 1434 aa14.88□□□□□ -0.03
DDR1-223ENST00000324771 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
DDR1-223ENST00000324771 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
DDR1-223ENST00000324771 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
DDR1-223ENST00000324771 PLCH2O75038 1416 aa14.87□□□□□ -0.03
DDR1-223ENST00000324771 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
DDR1-223ENST00000324771 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
DDR1-223ENST00000324771 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
DDR1-223ENST00000324771 TESK2Q96S53 571 aa14.87□□□□□ -0.03
DDR1-223ENST00000324771 CFAP43Q8NDM7 1665 aa14.86□□□□□ -0.03
DDR1-223ENST00000324771 TRIM6-TRIM34B2RNG4 842 aa14.86□□□□□ -0.03
DDR1-223ENST00000324771 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
DDR1-223ENST00000324771 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
DDR1-223ENST00000324771 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
DDR1-223ENST00000324771 DCTN1Q14203 1278 aa14.85□□□□□ -0.03
DDR1-223ENST00000324771 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
DDR1-223ENST00000324771 ABTB2Q8N961 1025 aa14.85□□□□□ -0.03
DDR1-223ENST00000324771 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
DDR1-223ENST00000324771 NUP160Q12769 1436 aa14.85□□□□□ -0.03
DDR1-223ENST00000324771 PZPP20742 1482 aa14.84□□□□□ -0.03
DDR1-223ENST00000324771 NME9Q86XW9 330 aa14.84□□□□□ -0.03
DDR1-223ENST00000324771 CHMP3Q9Y3E7 222 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms