RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 ADGRB1O14514 1584 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 NOS1P29475 1434 aa16.47■□□□□ 0.23
NCL-201ENST00000322723 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
NCL-201ENST00000322723 USP32Q8NFA0 1604 aa16.46■□□□□ 0.23
NCL-201ENST00000322723 NPATQ14207 1427 aa16.45■□□□□ 0.22
NCL-201ENST00000322723 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
NCL-201ENST00000322723 ERICH6BQ5W0A0 696 aa16.44■□□□□ 0.22
NCL-201ENST00000322723 RALBP1Q15311 655 aa16.44■□□□□ 0.22
NCL-201ENST00000322723 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
NCL-201ENST00000322723 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
NCL-201ENST00000322723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.223e-12■■■■□ 25.3
NCL-201ENST00000322723 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
NCL-201ENST00000322723 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
NCL-201ENST00000322723 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
NCL-201ENST00000322723 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
NCL-201ENST00000322723 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
NCL-201ENST00000322723 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
NCL-201ENST00000322723 MYBBP1AQ9BQG0 1328 aaKnown RBP16.42■□□□□ 0.22
NCL-201ENST00000322723 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
NCL-201ENST00000322723 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
NCL-201ENST00000322723 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
NCL-201ENST00000322723 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
NCL-201ENST00000322723 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
NCL-201ENST00000322723 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
NCL-201ENST00000322723 MYO5BQ9ULV0 1848 aa16.39■□□□□ 0.22
NCL-201ENST00000322723 TMEM131LA2VDJ0 1609 aa16.38■□□□□ 0.21
NCL-201ENST00000322723 FKBP8Q14318 412 aa16.37■□□□□ 0.21
NCL-201ENST00000322723 AGLP35573 1532 aa16.37■□□□□ 0.21
NCL-201ENST00000322723 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
NCL-201ENST00000322723 CLTCQ00610 1675 aaKnown RBP16.36■□□□□ 0.21
NCL-201ENST00000322723 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
NCL-201ENST00000322723 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
NCL-201ENST00000322723 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
NCL-201ENST00000322723 SETD1AO15047 1707 aaKnown RBP16.34■□□□□ 0.21
NCL-201ENST00000322723 KIF3BO15066 747 aa16.34■□□□□ 0.21
NCL-201ENST00000322723 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
NCL-201ENST00000322723 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
NCL-201ENST00000322723 TMF1P82094 1093 aa16.31■□□□□ 0.2
NCL-201ENST00000322723 SHPRHQ149N8 1683 aa16.31■□□□□ 0.2
NCL-201ENST00000322723 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
NCL-201ENST00000322723 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
NCL-201ENST00000322723 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
NCL-201ENST00000322723 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
NCL-201ENST00000322723 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.21e-8■■■□□ 18.9
NCL-201ENST00000322723 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.2
NCL-201ENST00000322723 YEATS2Q9ULM3 1422 aa16.27■□□□□ 0.19
NCL-201ENST00000322723 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.19
NCL-201ENST00000322723 SPATA31D1Q6ZQQ2 1576 aa16.26■□□□□ 0.19
NCL-201ENST00000322723 NUDCQ9Y266 331 aa16.26■□□□□ 0.19
NCL-201ENST00000322723 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
NCL-201ENST00000322723 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
NCL-201ENST00000322723 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
NCL-201ENST00000322723 PANK3Q9H999 370 aa16.24■□□□□ 0.19
NCL-201ENST00000322723 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
NCL-201ENST00000322723 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
NCL-201ENST00000322723 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
NCL-201ENST00000322723 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
NCL-201ENST00000322723 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
NCL-201ENST00000322723 PUS7Q96PZ0 661 aaKnown RBP16.19■□□□□ 0.18
NCL-201ENST00000322723 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
NCL-201ENST00000322723 NBR1Q14596 966 aa16.18■□□□□ 0.18
NCL-201ENST00000322723 NRXN3Q9Y4C0 1643 aa16.18■□□□□ 0.18
NCL-201ENST00000322723 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
NCL-201ENST00000322723 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
NCL-201ENST00000322723 PTPRMP28827 1452 aa16.17■□□□□ 0.18
NCL-201ENST00000322723 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
NCL-201ENST00000322723 CFAP70Q5T0N1 1121 aa16.17■□□□□ 0.18
NCL-201ENST00000322723 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
NCL-201ENST00000322723 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
NCL-201ENST00000322723 ZNF521Q96K83 1311 aa16.15■□□□□ 0.18
NCL-201ENST00000322723 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
NCL-201ENST00000322723 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
NCL-201ENST00000322723 POLR3GLQ9BT43 218 aa16.14■□□□□ 0.17
NCL-201ENST00000322723 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
NCL-201ENST00000322723 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
NCL-201ENST00000322723 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
NCL-201ENST00000322723 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
NCL-201ENST00000322723 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
NCL-201ENST00000322723 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
NCL-201ENST00000322723 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
NCL-201ENST00000322723 MED14O60244 1454 aa16.1■□□□□ 0.17
NCL-201ENST00000322723 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
NCL-201ENST00000322723 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
NCL-201ENST00000322723 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
NCL-201ENST00000322723 SLC52A1Q9NWF4 448 aa16.08■□□□□ 0.17
NCL-201ENST00000322723 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
NCL-201ENST00000322723 RBM19Q9Y4C8 960 aaKnown RBP16.07■□□□□ 0.16
NCL-201ENST00000322723 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
NCL-201ENST00000322723 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
NCL-201ENST00000322723 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
NCL-201ENST00000322723 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
NCL-201ENST00000322723 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
NCL-201ENST00000322723 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
NCL-201ENST00000322723 PLEKHH1Q9ULM0 1364 aa16.05■□□□□ 0.16
NCL-201ENST00000322723 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
NCL-201ENST00000322723 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms