RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 SHPRHQ149N8 1683 aa21.09■□□□□ 0.97
SYCN-201ENST00000318438 AFF2P51816 1311 aa21.08■□□□□ 0.97
SYCN-201ENST00000318438 RGS12O14924 1447 aa21.08■□□□□ 0.97
SYCN-201ENST00000318438 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
SYCN-201ENST00000318438 C14orf37Q86TY3 774 aa21.06■□□□□ 0.96
SYCN-201ENST00000318438 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
SYCN-201ENST00000318438 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
SYCN-201ENST00000318438 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
SYCN-201ENST00000318438 DIP2AQ14689 1571 aa21.02■□□□□ 0.96
SYCN-201ENST00000318438 CHD2O14647 1828 aaKnown RBP21■□□□□ 0.95
SYCN-201ENST00000318438 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
SYCN-201ENST00000318438 QTRT2Q9H974 415 aaKnown RBP21■□□□□ 0.95
SYCN-201ENST00000318438 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
SYCN-201ENST00000318438 ERBINQ96RT1 1412 aa21■□□□□ 0.95
SYCN-201ENST00000318438 KANK1Q14678 1352 aa20.99■□□□□ 0.95
SYCN-201ENST00000318438 NCOA3Q9Y6Q9 1424 aa20.99■□□□□ 0.95
SYCN-201ENST00000318438 ATF3P18847 181 aa20.99■□□□□ 0.95
SYCN-201ENST00000318438 PLEKHG1Q9ULL1 1385 aa20.98■□□□□ 0.95
SYCN-201ENST00000318438 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
SYCN-201ENST00000318438 BRINP3Q76B58 766 aa20.98■□□□□ 0.95
SYCN-201ENST00000318438 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.98■□□□□ 0.95
SYCN-201ENST00000318438 C8orf37Q96NL8 207 aa20.97■□□□□ 0.95
SYCN-201ENST00000318438 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
SYCN-201ENST00000318438 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
SYCN-201ENST00000318438 NOS1P29475 1434 aa20.96■□□□□ 0.95
SYCN-201ENST00000318438 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
SYCN-201ENST00000318438 ZRANB1Q9UGI0 708 aa20.96■□□□□ 0.95
SYCN-201ENST00000318438 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
SYCN-201ENST00000318438 MYOM3Q5VTT5 1437 aa20.95■□□□□ 0.95
SYCN-201ENST00000318438 LMTK2Q8IWU2 1503 aa20.94■□□□□ 0.94
SYCN-201ENST00000318438 TBX22Q9Y458 520 aa20.93■□□□□ 0.94
SYCN-201ENST00000318438 ATAD2Q6PL18 1390 aa20.93■□□□□ 0.94
SYCN-201ENST00000318438 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
SYCN-201ENST00000318438 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
SYCN-201ENST00000318438 EP400Q96L91 3159 aa20.92■□□□□ 0.94
SYCN-201ENST00000318438 SETD5Q9C0A6 1442 aa20.91■□□□□ 0.94
SYCN-201ENST00000318438 ASXL1Q8IXJ9 1541 aa20.89■□□□□ 0.94
SYCN-201ENST00000318438 ABCC5O15440 1437 aa20.88■□□□□ 0.93
SYCN-201ENST00000318438 FOXD1Q16676 465 aa20.87■□□□□ 0.93
SYCN-201ENST00000318438 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
SYCN-201ENST00000318438 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
SYCN-201ENST00000318438 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
SYCN-201ENST00000318438 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
SYCN-201ENST00000318438 PNPLA6Q8IY17 1366 aa20.85■□□□□ 0.93
SYCN-201ENST00000318438 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
SYCN-201ENST00000318438 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
SYCN-201ENST00000318438 CROCC2H7BZ55 1655 aa20.85■□□□□ 0.93
SYCN-201ENST00000318438 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
SYCN-201ENST00000318438 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
SYCN-201ENST00000318438 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.92
SYCN-201ENST00000318438 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
SYCN-201ENST00000318438 AMOTL2Q9Y2J4 779 aa20.82■□□□□ 0.92
SYCN-201ENST00000318438 TMEM131LA2VDJ0 1609 aa20.82■□□□□ 0.92
SYCN-201ENST00000318438 MST1RQ04912 1400 aa20.81■□□□□ 0.92
SYCN-201ENST00000318438 PTPRUQ92729 1446 aa20.81■□□□□ 0.92
SYCN-201ENST00000318438 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
SYCN-201ENST00000318438 DCCP43146 1447 aa20.8■□□□□ 0.92
SYCN-201ENST00000318438 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
SYCN-201ENST00000318438 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
SYCN-201ENST00000318438 DAPK1P53355 1430 aa20.79■□□□□ 0.92
SYCN-201ENST00000318438 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
SYCN-201ENST00000318438 USP21Q9UK80 565 aa20.78■□□□□ 0.92
SYCN-201ENST00000318438 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
SYCN-201ENST00000318438 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
SYCN-201ENST00000318438 TRPM2O94759 1503 aa20.76■□□□□ 0.91
SYCN-201ENST00000318438 ANKRD30AQ9BXX3 1397 aa20.75■□□□□ 0.91
SYCN-201ENST00000318438 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
SYCN-201ENST00000318438 PTPN23Q9H3S7 1636 aa20.73■□□□□ 0.91
SYCN-201ENST00000318438 CCDC125Q86Z20 511 aa20.72■□□□□ 0.91
SYCN-201ENST00000318438 ATRNO75882 1429 aa20.71■□□□□ 0.91
SYCN-201ENST00000318438 FNBP4Q8N3X1 1017 aaPredicted RBP20.7■□□□□ 0.9
SYCN-201ENST00000318438 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
SYCN-201ENST00000318438 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
SYCN-201ENST00000318438 UNC13BO14795 1591 aa20.68■□□□□ 0.9
SYCN-201ENST00000318438 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
SYCN-201ENST00000318438 ADGRL3Q9HAR2 1447 aa20.65■□□□□ 0.9
SYCN-201ENST00000318438 DEFB132Q7Z7B7 95 aa20.63■□□□□ 0.89
SYCN-201ENST00000318438 C1orf167Q5SNV9 1468 aa20.62■□□□□ 0.89
SYCN-201ENST00000318438 METP08581 1390 aa20.62■□□□□ 0.89
SYCN-201ENST00000318438 LRP5O75197 1615 aa20.62■□□□□ 0.89
SYCN-201ENST00000318438 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
SYCN-201ENST00000318438 SOS2Q07890 1332 aaPredicted RBP20.61■□□□□ 0.89
SYCN-201ENST00000318438 BCL9LQ86UU0 1499 aa20.61■□□□□ 0.89
SYCN-201ENST00000318438 BLMP54132 1417 aaPredicted RBP20.61■□□□□ 0.89
SYCN-201ENST00000318438 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
SYCN-201ENST00000318438 NALCNQ8IZF0 1738 aa20.6■□□□□ 0.89
SYCN-201ENST00000318438 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
SYCN-201ENST00000318438 ORAI2Q96SN7 254 aa20.59■□□□□ 0.89
SYCN-201ENST00000318438 LAMC1P11047 1609 aa20.58■□□□□ 0.89
SYCN-201ENST00000318438 GJD4Q96KN9 370 aaPredicted RBP20.58■□□□□ 0.89
SYCN-201ENST00000318438 MYOM2P54296 1465 aa20.56■□□□□ 0.88
SYCN-201ENST00000318438 E9PCH4 1651 aa20.55■□□□□ 0.88
SYCN-201ENST00000318438 COL22A1Q8NFW1 1626 aaPredicted RBP20.54■□□□□ 0.88
SYCN-201ENST00000318438 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
SYCN-201ENST00000318438 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
SYCN-201ENST00000318438 RALGAPBQ86X10 1494 aa20.5■□□□□ 0.87
SYCN-201ENST00000318438 GLI3P10071 1580 aa20.5■□□□□ 0.87
SYCN-201ENST00000318438 HRCP23327 699 aa20.49■□□□□ 0.87
SYCN-201ENST00000318438 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
SYCN-201ENST00000318438 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms