RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 KIF1BO60333 1816 aa8.51□□□□□ -1.05
PDE4D-202ENST00000317118 UGGT1Q9NYU2 1555 aa8.51□□□□□ -1.05
PDE4D-202ENST00000317118 IDI1Q13907 227 aa8.5□□□□□ -1.05
PDE4D-202ENST00000317118 PTPRMP28827 1452 aa8.5□□□□□ -1.05
PDE4D-202ENST00000317118 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
PDE4D-202ENST00000317118 TMEM131LA2VDJ0 1609 aa8.49□□□□□ -1.05
PDE4D-202ENST00000317118 PPP1R15AO75807 674 aaPredicted RBP8.49□□□□□ -1.05
PDE4D-202ENST00000317118 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
PDE4D-202ENST00000317118 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
PDE4D-202ENST00000317118 MYOM2P54296 1465 aa8.47□□□□□ -1.05
PDE4D-202ENST00000317118 IFT172Q9UG01 1749 aa8.47□□□□□ -1.05
PDE4D-202ENST00000317118 CEBPAP49715 358 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-202ENST00000317118 A2ML1A8K2U0 1454 aa8.47□□□□□ -1.05
PDE4D-202ENST00000317118 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
PDE4D-202ENST00000317118 MYO3AQ8NEV4 1616 aa8.47□□□□□ -1.05
PDE4D-202ENST00000317118 CFAP65Q6ZU64 1925 aaKnown RBP8.46□□□□□ -1.06
PDE4D-202ENST00000317118 UBR1Q8IWV7 1749 aa8.46□□□□□ -1.06
PDE4D-202ENST00000317118 ZNF142P52746 1687 aaPredicted RBP8.46□□□□□ -1.06
PDE4D-202ENST00000317118 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.06
PDE4D-202ENST00000317118 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
PDE4D-202ENST00000317118 NEXMIFQ5QGS0 1516 aa8.45□□□□□ -1.06
PDE4D-202ENST00000317118 RGL3Q3MIN7 710 aa8.45□□□□□ -1.06
PDE4D-202ENST00000317118 PPLO60437 1756 aa8.45□□□□□ -1.06
PDE4D-202ENST00000317118 PRAG1Q86YV5 1406 aa8.44□□□□□ -1.06
PDE4D-202ENST00000317118 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
PDE4D-202ENST00000317118 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-202ENST00000317118 SLIT1O75093 1534 aa8.44□□□□□ -1.06
PDE4D-202ENST00000317118 VGFO15240 615 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 HDGFP51858 240 aaKnown RBP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
PDE4D-202ENST00000317118 CHGAP10645 457 aaKnown RBP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 ZNF326Q5BKZ1 582 aaKnown RBP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 STAG3Q9UJ98 1225 aa8.43□□□□□ -1.06
PDE4D-202ENST00000317118 SETD1BQ9UPS6 1966 aaKnown RBP8.43□□□□□ -1.06
PDE4D-202ENST00000317118 TMEM2Q9UHN6 1383 aa8.43□□□□□ -1.06
PDE4D-202ENST00000317118 KIAA1210Q9ULL0 1709 aa8.42□□□□□ -1.06
PDE4D-202ENST00000317118 THEMISQ8N1K5 641 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-202ENST00000317118 MYO5BQ9ULV0 1848 aa8.42□□□□□ -1.06
PDE4D-202ENST00000317118 RALGAPBQ86X10 1494 aa8.42□□□□□ -1.06
PDE4D-202ENST00000317118 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
PDE4D-202ENST00000317118 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
PDE4D-202ENST00000317118 PIK3C2GO75747 1445 aa8.41□□□□□ -1.06
PDE4D-202ENST00000317118 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
PDE4D-202ENST00000317118 LAMC1P11047 1609 aa8.41□□□□□ -1.06
PDE4D-202ENST00000317118 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
PDE4D-202ENST00000317118 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
PDE4D-202ENST00000317118 ADGRF5Q8IZF2 1346 aa8.4□□□□□ -1.07
PDE4D-202ENST00000317118 SETBP1Q9Y6X0 1596 aa8.39□□□□□ -1.07
PDE4D-202ENST00000317118 PLEKHG1Q9ULL1 1385 aa8.38□□□□□ -1.07
PDE4D-202ENST00000317118 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
PDE4D-202ENST00000317118 EID1Q9Y6B2 187 aa8.37□□□□□ -1.07
PDE4D-202ENST00000317118 SCAF11Q99590 1463 aaKnown RBP8.37□□□□□ -1.07
PDE4D-202ENST00000317118 MED14O60244 1454 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 ADGRB1O14514 1584 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
PDE4D-202ENST00000317118 NRXN3Q9Y4C0 1643 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 LTKP29376 864 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 TXNDC2Q86VQ3 553 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 DIP2AQ14689 1571 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 ALKQ9UM73 1620 aa8.36□□□□□ -1.07
PDE4D-202ENST00000317118 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
PDE4D-202ENST00000317118 SETD1AO15047 1707 aaKnown RBP8.35□□□□□ -1.07
PDE4D-202ENST00000317118 LMTK3Q96Q04 1460 aa8.35□□□□□ -1.07
PDE4D-202ENST00000317118 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
PDE4D-202ENST00000317118 NBPF1Q3BBV0 1214 aa8.34□□□□□ -1.07
PDE4D-202ENST00000317118 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
PDE4D-202ENST00000317118 ADAMTS13Q76LX8 1427 aa8.34□□□□□ -1.07
PDE4D-202ENST00000317118 IQGAP1P46940 1657 aa8.34□□□□□ -1.07
PDE4D-202ENST00000317118 POLR1AO95602 1720 aaPredicted RBP8.33□□□□□ -1.08
PDE4D-202ENST00000317118 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDE4D-202ENST00000317118 NUTM2DQ5VT03 806 aaPredicted RBP8.33□□□□□ -1.08
PDE4D-202ENST00000317118 TBX22Q9Y458 520 aa8.33□□□□□ -1.08
PDE4D-202ENST00000317118 ASXL1Q8IXJ9 1541 aa8.33□□□□□ -1.08
PDE4D-202ENST00000317118 PIK3R4Q99570 1358 aa8.33□□□□□ -1.08
PDE4D-202ENST00000317118 USP47Q96K76 1375 aa8.32□□□□□ -1.08
PDE4D-202ENST00000317118 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
PDE4D-202ENST00000317118 NPHP4O75161 1426 aaPredicted RBP8.32□□□□□ -1.08
PDE4D-202ENST00000317118 EIF3AQ14152 1382 aaKnown RBP8.31□□□□□ -1.08
PDE4D-202ENST00000317118 SIRT1Q96EB6 747 aa8.31□□□□□ -1.08
PDE4D-202ENST00000317118 TECPR2O15040 1411 aa8.31□□□□□ -1.08
PDE4D-202ENST00000317118 LRPPRCP42704 1394 aaKnown RBP8.31□□□□□ -1.08
PDE4D-202ENST00000317118 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
PDE4D-202ENST00000317118 ABCC11Q96J66 1382 aa8.31□□□□□ -1.08
PDE4D-202ENST00000317118 KNDC1Q76NI1 1749 aa8.3□□□□□ -1.08
PDE4D-202ENST00000317118 HSPA5P11021 654 aaKnown RBP8.3□□□□□ -1.08
PDE4D-202ENST00000317118 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-202ENST00000317118 ARXQ96QS3 562 aa8.3□□□□□ -1.08
PDE4D-202ENST00000317118 METP08581 1390 aa8.3□□□□□ -1.08
PDE4D-202ENST00000317118 SBNO2Q9Y2G9 1366 aa8.3□□□□□ -1.08
PDE4D-202ENST00000317118 AMER1Q5JTC6 1135 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-202ENST00000317118 FAM135BQ49AJ0 1406 aa8.29□□□□□ -1.08
PDE4D-202ENST00000317118 CPS1P31327 1500 aa8.29□□□□□ -1.08
PDE4D-202ENST00000317118 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
PDE4D-202ENST00000317118 ARHGEF28Q8N1W1 1705 aaKnown RBP8.28□□□□□ -1.08
PDE4D-202ENST00000317118 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
PDE4D-202ENST00000317118 BCANQ96GW7 911 aa8.28□□□□□ -1.08
PDE4D-202ENST00000317118 PTCH1Q13635 1447 aa8.28□□□□□ -1.08
PDE4D-202ENST00000317118 XRN1Q8IZH2 1706 aaKnown RBP8.27□□□□□ -1.08
PDE4D-202ENST00000317118 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms