RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 PPLO60437 1756 aa15.21■□□□□ 0.03
EFCAB11-201ENST00000316738 TSPOAP1O95153 1857 aa15.21■□□□□ 0.03
EFCAB11-201ENST00000316738 SYNMO15061 1565 aa15.21■□□□□ 0.02
EFCAB11-201ENST00000316738 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
EFCAB11-201ENST00000316738 SCAF11Q99590 1463 aaKnown RBP15.18■□□□□ 0.02
EFCAB11-201ENST00000316738 AGLP35573 1532 aa15.18■□□□□ 0.02
EFCAB11-201ENST00000316738 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
EFCAB11-201ENST00000316738 GGT6Q6P531 493 aa15.18■□□□□ 0.02
EFCAB11-201ENST00000316738 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
EFCAB11-201ENST00000316738 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
EFCAB11-201ENST00000316738 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
EFCAB11-201ENST00000316738 CFAP65Q6ZU64 1925 aaKnown RBP15.16■□□□□ 0.02
EFCAB11-201ENST00000316738 MYO3AQ8NEV4 1616 aa15.15■□□□□ 0.02
EFCAB11-201ENST00000316738 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
EFCAB11-201ENST00000316738 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
EFCAB11-201ENST00000316738 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
EFCAB11-201ENST00000316738 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
EFCAB11-201ENST00000316738 PIK3C2GO75747 1445 aa15.13■□□□□ 0.01
EFCAB11-201ENST00000316738 PER1O15534 1290 aaPredicted RBP15.12■□□□□ 0.01
EFCAB11-201ENST00000316738 RPGRIP1LQ68CZ1 1315 aa15.12■□□□□ 0.01
EFCAB11-201ENST00000316738 NEXMIFQ5QGS0 1516 aa15.11■□□□□ 0.01
EFCAB11-201ENST00000316738 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
EFCAB11-201ENST00000316738 TMF1P82094 1093 aa15.1■□□□□ 0.01
EFCAB11-201ENST00000316738 MYOM1P52179 1685 aa15.1■□□□□ 0.01
EFCAB11-201ENST00000316738 ARHGEF40Q8TER5 1519 aa15.1■□□□□ 0.01
EFCAB11-201ENST00000316738 TMEM131LA2VDJ0 1609 aa15.09■□□□□ 0.01
EFCAB11-201ENST00000316738 POLR3GLQ9BT43 218 aa15.08■□□□□ 0.01
EFCAB11-201ENST00000316738 MRS2Q9HD23 443 aa15.08■□□□□ 0
EFCAB11-201ENST00000316738 CFAP70Q5T0N1 1121 aa15.08■□□□□ 0
EFCAB11-201ENST00000316738 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0
EFCAB11-201ENST00000316738 PARD3Q8TEW0 1356 aa15.08■□□□□ 0
EFCAB11-201ENST00000316738 ZFYVE9O95405 1425 aa15.07■□□□□ 0
EFCAB11-201ENST00000316738 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
EFCAB11-201ENST00000316738 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
EFCAB11-201ENST00000316738 RALBP1Q15311 655 aa15.06■□□□□ 0
EFCAB11-201ENST00000316738 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
EFCAB11-201ENST00000316738 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
EFCAB11-201ENST00000316738 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ 0
EFCAB11-201ENST00000316738 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
EFCAB11-201ENST00000316738 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
EFCAB11-201ENST00000316738 ERVK-7P63135 1459 aa15.04■□□□□ -0
EFCAB11-201ENST00000316738 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
EFCAB11-201ENST00000316738 BRD4O60885 1362 aaPredicted RBP15.03■□□□□ -0
EFCAB11-201ENST00000316738 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
EFCAB11-201ENST00000316738 HNRNPUQ00839 825 aaKnown RBP eCLIP15.03■□□□□ -0
EFCAB11-201ENST00000316738 IDI1Q13907 227 aa15.03■□□□□ -0
EFCAB11-201ENST00000316738 LRPPRCP42704 1394 aaKnown RBP15.02□□□□□ -0.01
EFCAB11-201ENST00000316738 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
EFCAB11-201ENST00000316738 PANK3Q9H999 370 aa15.01□□□□□ -0.01
EFCAB11-201ENST00000316738 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
EFCAB11-201ENST00000316738 CDCA8Q53HL2 280 aa15.01□□□□□ -0.01
EFCAB11-201ENST00000316738 SUPT16HQ9Y5B9 1047 aaKnown RBP15□□□□□ -0.01
EFCAB11-201ENST00000316738 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
EFCAB11-201ENST00000316738 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
EFCAB11-201ENST00000316738 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
EFCAB11-201ENST00000316738 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
EFCAB11-201ENST00000316738 VGFO15240 615 aaPredicted RBP14.98□□□□□ -0.01
EFCAB11-201ENST00000316738 ASXL1Q8IXJ9 1541 aa14.97□□□□□ -0.01
EFCAB11-201ENST00000316738 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
EFCAB11-201ENST00000316738 FBXO31Q5XUX0 539 aaPredicted RBP14.96□□□□□ -0.02
EFCAB11-201ENST00000316738 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
EFCAB11-201ENST00000316738 INSRP06213 1382 aa14.94□□□□□ -0.02
EFCAB11-201ENST00000316738 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
EFCAB11-201ENST00000316738 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
EFCAB11-201ENST00000316738 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
EFCAB11-201ENST00000316738 A2ML1A8K2U0 1454 aa14.93□□□□□ -0.02
EFCAB11-201ENST00000316738 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
EFCAB11-201ENST00000316738 ZBTB22O15209 634 aa14.91□□□□□ -0.02
EFCAB11-201ENST00000316738 ALKQ9UM73 1620 aa14.91□□□□□ -0.02
EFCAB11-201ENST00000316738 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
EFCAB11-201ENST00000316738 CNGB1Q14028 1251 aaPredicted RBP14.9□□□□□ -0.02
EFCAB11-201ENST00000316738 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
EFCAB11-201ENST00000316738 TULP4Q9NRJ4 1543 aa14.9□□□□□ -0.02
EFCAB11-201ENST00000316738 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
EFCAB11-201ENST00000316738 USP32Q8NFA0 1604 aa14.89□□□□□ -0.03
EFCAB11-201ENST00000316738 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
EFCAB11-201ENST00000316738 PTPRMP28827 1452 aa14.89□□□□□ -0.03
EFCAB11-201ENST00000316738 ZMYM3Q14202 1370 aa14.88□□□□□ -0.03
EFCAB11-201ENST00000316738 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
EFCAB11-201ENST00000316738 NUTM2DQ5VT03 806 aaPredicted RBP14.87□□□□□ -0.03
EFCAB11-201ENST00000316738 SMG6Q86US8 1419 aaKnown RBP14.87□□□□□ -0.03
EFCAB11-201ENST00000316738 NRXN3Q9Y4C0 1643 aa14.87□□□□□ -0.03
EFCAB11-201ENST00000316738 BLMP54132 1417 aaPredicted RBP14.87□□□□□ -0.03
EFCAB11-201ENST00000316738 CARD14Q9BXL6 1004 aa14.86□□□□□ -0.03
EFCAB11-201ENST00000316738 FKBP8Q14318 412 aa14.84□□□□□ -0.03
EFCAB11-201ENST00000316738 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
EFCAB11-201ENST00000316738 DLC1Q96QB1 1528 aa14.84□□□□□ -0.03
EFCAB11-201ENST00000316738 PPP2R1AP30153 589 aa14.84□□□□□ -0.03
EFCAB11-201ENST00000316738 RIMS2Q9UQ26 1411 aa14.84□□□□□ -0.03
EFCAB11-201ENST00000316738 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.03
EFCAB11-201ENST00000316738 MLECQ14165 292 aa14.82□□□□□ -0.04
EFCAB11-201ENST00000316738 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
EFCAB11-201ENST00000316738 KNDC1Q76NI1 1749 aa14.79□□□□□ -0.04
EFCAB11-201ENST00000316738 NEFLP07196 543 aa14.79□□□□□ -0.04
EFCAB11-201ENST00000316738 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
EFCAB11-201ENST00000316738 TNRQ92752 1358 aa14.78□□□□□ -0.04
EFCAB11-201ENST00000316738 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
EFCAB11-201ENST00000316738 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
EFCAB11-201ENST00000316738 C3P01024 1663 aa14.78□□□□□ -0.04
EFCAB11-201ENST00000316738 ANKRD36BQ8N2N9 1353 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms