RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ABCC3O15438 1527 aa23.14■■□□□ 1.3
SCAMP4-201ENST00000316097 LMTK2Q8IWU2 1503 aa23.14■■□□□ 1.3
SCAMP4-201ENST00000316097 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
SCAMP4-201ENST00000316097 KIF13AQ9H1H9 1805 aa23.14■■□□□ 1.29
SCAMP4-201ENST00000316097 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
SCAMP4-201ENST00000316097 NUTM2DQ5VT03 806 aaPredicted RBP23.13■■□□□ 1.29
SCAMP4-201ENST00000316097 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
SCAMP4-201ENST00000316097 FBXO31Q5XUX0 539 aaPredicted RBP23.09■■□□□ 1.29
SCAMP4-201ENST00000316097 GPRASP1Q5JY77 1395 aa23.08■■□□□ 1.29
SCAMP4-201ENST00000316097 ZMYM4Q5VZL5 1548 aa23.06■■□□□ 1.28
SCAMP4-201ENST00000316097 TESK2Q96S53 571 aa23.05■■□□□ 1.28
SCAMP4-201ENST00000316097 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
SCAMP4-201ENST00000316097 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
SCAMP4-201ENST00000316097 IDI1Q13907 227 aa23.05■■□□□ 1.28
SCAMP4-201ENST00000316097 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
SCAMP4-201ENST00000316097 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
SCAMP4-201ENST00000316097 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
SCAMP4-201ENST00000316097 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
SCAMP4-201ENST00000316097 ANP32AP39687 249 aaKnown RBP23.03■■□□□ 1.28
SCAMP4-201ENST00000316097 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
SCAMP4-201ENST00000316097 NUDCQ9Y266 331 aa23.02■■□□□ 1.28
SCAMP4-201ENST00000316097 NOS1P29475 1434 aa23.02■■□□□ 1.28
SCAMP4-201ENST00000316097 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
SCAMP4-201ENST00000316097 IPO9Q96P70 1041 aaKnown RBP23■■□□□ 1.27
SCAMP4-201ENST00000316097 KIF1BO60333 1816 aa23■■□□□ 1.27
SCAMP4-201ENST00000316097 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
SCAMP4-201ENST00000316097 ARID4BQ4LE39 1312 aaPredicted RBP22.98■■□□□ 1.27
SCAMP4-201ENST00000316097 SENP3-EIF4A1A0A087X0R7 540 aa22.97■■□□□ 1.27
SCAMP4-201ENST00000316097 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
SCAMP4-201ENST00000316097 SYNMO15061 1565 aa22.97■■□□□ 1.27
SCAMP4-201ENST00000316097 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
SCAMP4-201ENST00000316097 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
SCAMP4-201ENST00000316097 ZBTB47Q9UFB7 747 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-201ENST00000316097 ADGRB3O60242 1522 aa22.95■■□□□ 1.26
SCAMP4-201ENST00000316097 RTL5Q5HYW3 569 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-201ENST00000316097 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
SCAMP4-201ENST00000316097 TMF1P82094 1093 aa22.93■■□□□ 1.26
SCAMP4-201ENST00000316097 MYOM2P54296 1465 aa22.9■■□□□ 1.26
SCAMP4-201ENST00000316097 LAMC1P11047 1609 aa22.9■■□□□ 1.26
SCAMP4-201ENST00000316097 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
SCAMP4-201ENST00000316097 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
SCAMP4-201ENST00000316097 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.26
SCAMP4-201ENST00000316097 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
SCAMP4-201ENST00000316097 PANK3Q9H999 370 aa22.87■■□□□ 1.25
SCAMP4-201ENST00000316097 ZC3H13Q5T200 1668 aaKnown RBP22.87■■□□□ 1.25
SCAMP4-201ENST00000316097 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
SCAMP4-201ENST00000316097 IFT172Q9UG01 1749 aa22.86■■□□□ 1.25
SCAMP4-201ENST00000316097 ESF1Q9H501 851 aaKnown RBP22.86■■□□□ 1.25
SCAMP4-201ENST00000316097 C14orf93Q9H972 538 aaKnown RBP22.86■■□□□ 1.25
SCAMP4-201ENST00000316097 AGLP35573 1532 aa22.86■■□□□ 1.25
SCAMP4-201ENST00000316097 RPGRIP1LQ68CZ1 1315 aa22.85■■□□□ 1.25
SCAMP4-201ENST00000316097 CLTCQ00610 1675 aaKnown RBP22.85■■□□□ 1.25
SCAMP4-201ENST00000316097 PIK3C2BO00750 1634 aa22.85■■□□□ 1.25
SCAMP4-201ENST00000316097 ARHGEF40Q8TER5 1519 aa22.85■■□□□ 1.25
SCAMP4-201ENST00000316097 NRXN1Q9ULB1 1477 aa22.85■■□□□ 1.25
SCAMP4-201ENST00000316097 VGFO15240 615 aaPredicted RBP22.84■■□□□ 1.25
SCAMP4-201ENST00000316097 PREX1Q8TCU6 1659 aa22.84■■□□□ 1.25
SCAMP4-201ENST00000316097 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
SCAMP4-201ENST00000316097 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
SCAMP4-201ENST00000316097 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
SCAMP4-201ENST00000316097 REREQ9P2R6 1566 aa22.83■■□□□ 1.25
SCAMP4-201ENST00000316097 PER1O15534 1290 aaPredicted RBP22.83■■□□□ 1.24
SCAMP4-201ENST00000316097 ERVK-7P63135 1459 aa22.82■■□□□ 1.24
SCAMP4-201ENST00000316097 PPLO60437 1756 aa22.82■■□□□ 1.24
SCAMP4-201ENST00000316097 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
SCAMP4-201ENST00000316097 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
SCAMP4-201ENST00000316097 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
SCAMP4-201ENST00000316097 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
SCAMP4-201ENST00000316097 TMC1Q8TDI8 760 aa22.81■■□□□ 1.24
SCAMP4-201ENST00000316097 ZMYM3Q14202 1370 aa22.8■■□□□ 1.24
SCAMP4-201ENST00000316097 STK26Q9P289 416 aa22.79■■□□□ 1.24
SCAMP4-201ENST00000316097 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
SCAMP4-201ENST00000316097 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
SCAMP4-201ENST00000316097 CEBPAP49715 358 aaPredicted RBP22.77■■□□□ 1.24
SCAMP4-201ENST00000316097 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
SCAMP4-201ENST00000316097 MYO5BQ9ULV0 1848 aa22.77■■□□□ 1.24
SCAMP4-201ENST00000316097 KIAA1210Q9ULL0 1709 aa22.76■■□□□ 1.23
SCAMP4-201ENST00000316097 TMEM131LA2VDJ0 1609 aa22.75■■□□□ 1.23
SCAMP4-201ENST00000316097 CENPJQ9HC77 1338 aaPredicted RBP22.74■■□□□ 1.23
SCAMP4-201ENST00000316097 RRP1P56182 461 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-201ENST00000316097 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
SCAMP4-201ENST00000316097 ADGRB1O14514 1584 aa22.72■■□□□ 1.23
SCAMP4-201ENST00000316097 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
SCAMP4-201ENST00000316097 ANO8Q9HCE9 1232 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-201ENST00000316097 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
SCAMP4-201ENST00000316097 PRKCSHP14314 528 aaPredicted RBP22.69■■□□□ 1.22
SCAMP4-201ENST00000316097 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
SCAMP4-201ENST00000316097 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
SCAMP4-201ENST00000316097 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
SCAMP4-201ENST00000316097 RALBP1Q15311 655 aa22.68■■□□□ 1.22
SCAMP4-201ENST00000316097 PDE4AP27815 886 aa22.67■■□□□ 1.22
SCAMP4-201ENST00000316097 LRPPRCP42704 1394 aaKnown RBP22.67■■□□□ 1.22
SCAMP4-201ENST00000316097 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
SCAMP4-201ENST00000316097 SPATA31D1Q6ZQQ2 1576 aa22.66■■□□□ 1.22
SCAMP4-201ENST00000316097 SETBP1Q9Y6X0 1596 aa22.66■■□□□ 1.22
SCAMP4-201ENST00000316097 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
SCAMP4-201ENST00000316097 NEFMP07197 916 aa22.66■■□□□ 1.22
SCAMP4-201ENST00000316097 KNSTRNQ9Y448 316 aa22.66■■□□□ 1.22
SCAMP4-201ENST00000316097 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
SCAMP4-201ENST00000316097 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms