RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
EXD1-201ENST00000314992 MEX3CQ5U5Q3 659 aaKnown RBP8.84□□□□□ -0.99
EXD1-201ENST00000314992 PTCH1Q13635 1447 aa8.83□□□□□ -1
EXD1-201ENST00000314992 MAST1Q9Y2H9 1570 aa8.83□□□□□ -1
EXD1-201ENST00000314992 MSH6P52701 1360 aa8.83□□□□□ -1
EXD1-201ENST00000314992 DHX29Q7Z478 1369 aaKnown RBP8.83□□□□□ -1
EXD1-201ENST00000314992 LRRIQ1Q96JM4 1722 aa8.83□□□□□ -1
EXD1-201ENST00000314992 SYCP2Q9BX26 1530 aa8.83□□□□□ -1
EXD1-201ENST00000314992 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
EXD1-201ENST00000314992 DISP2A7MBM2 1401 aa8.82□□□□□ -1
EXD1-201ENST00000314992 DCCP43146 1447 aa8.82□□□□□ -1
EXD1-201ENST00000314992 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.81□□□□□ -1
EXD1-201ENST00000314992 MARF1Q9Y4F3 1742 aaKnown RBP8.81□□□□□ -1
EXD1-201ENST00000314992 C1QTNF8P60827 252 aa8.8□□□□□ -1
EXD1-201ENST00000314992 SPAG9O60271 1321 aaKnown RBP8.8□□□□□ -1
EXD1-201ENST00000314992 EIF2AK4Q9P2K8 1649 aaKnown RBP8.8□□□□□ -1
EXD1-201ENST00000314992 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
EXD1-201ENST00000314992 FNBP4Q8N3X1 1017 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
EXD1-201ENST00000314992 NUTM2BA6NNL0 878 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 NUTM2EB1AL46 878 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 NUTM2DQ5VT03 806 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 NUTM2AQ8IVF1 878 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
EXD1-201ENST00000314992 ASXL1Q8IXJ9 1541 aa8.79□□□□□ -1
EXD1-201ENST00000314992 MSH5O43196 834 aa8.78□□□□□ -1
EXD1-201ENST00000314992 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
EXD1-201ENST00000314992 PNPLA6Q8IY17 1366 aa8.78□□□□□ -1
EXD1-201ENST00000314992 RGPD1P0DJD0 1748 aa8.78□□□□□ -1
EXD1-201ENST00000314992 FYCO1Q9BQS8 1478 aa8.78□□□□□ -1
EXD1-201ENST00000314992 RAB3GAP2Q9H2M9 1393 aa8.78□□□□□ -1
EXD1-201ENST00000314992 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
EXD1-201ENST00000314992 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
EXD1-201ENST00000314992 LTKP29376 864 aa8.76□□□□□ -1.01
EXD1-201ENST00000314992 TRPC5Q9UL62 973 aaPredicted RBP8.76□□□□□ -1.01
EXD1-201ENST00000314992 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
EXD1-201ENST00000314992 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
EXD1-201ENST00000314992 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
EXD1-201ENST00000314992 TMEM2Q9UHN6 1383 aa8.75□□□□□ -1.01
EXD1-201ENST00000314992 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
EXD1-201ENST00000314992 ADGRB3O60242 1522 aa8.75□□□□□ -1.01
EXD1-201ENST00000314992 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
EXD1-201ENST00000314992 RREB1Q92766 1687 aa8.74□□□□□ -1.01
EXD1-201ENST00000314992 YTHDC1Q96MU7 727 aaKnown RBP8.74□□□□□ -1.01
EXD1-201ENST00000314992 CCDC18Q5T9S5 1454 aa8.74□□□□□ -1.01
EXD1-201ENST00000314992 GLI3P10071 1580 aa8.74□□□□□ -1.01
EXD1-201ENST00000314992 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
EXD1-201ENST00000314992 PTPN23Q9H3S7 1636 aa8.73□□□□□ -1.01
EXD1-201ENST00000314992 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
EXD1-201ENST00000314992 TNS1Q9HBL0 1735 aaKnown RBP8.72□□□□□ -1.01
EXD1-201ENST00000314992 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
EXD1-201ENST00000314992 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
EXD1-201ENST00000314992 PIK3R4Q99570 1358 aa8.71□□□□□ -1.01
EXD1-201ENST00000314992 PROSER2Q86WR7 435 aaPredicted RBP8.71□□□□□ -1.01
EXD1-201ENST00000314992 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.01
EXD1-201ENST00000314992 CHD4Q14839 1912 aa8.71□□□□□ -1.02
EXD1-201ENST00000314992 GGT6Q6P531 493 aa8.71□□□□□ -1.02
EXD1-201ENST00000314992 EFCAB6Q5THR3 1501 aa8.7□□□□□ -1.02
EXD1-201ENST00000314992 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
EXD1-201ENST00000314992 TXNDC2Q86VQ3 553 aa8.69□□□□□ -1.02
EXD1-201ENST00000314992 MYOM2P54296 1465 aa8.69□□□□□ -1.02
EXD1-201ENST00000314992 CADPS2Q86UW7 1296 aa8.69□□□□□ -1.02
EXD1-201ENST00000314992 LRRC59Q96AG4 307 aaKnown RBP8.69□□□□□ -1.02
EXD1-201ENST00000314992 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
EXD1-201ENST00000314992 PPP1R15AO75807 674 aaPredicted RBP8.68□□□□□ -1.02
EXD1-201ENST00000314992 BRINP3Q76B58 766 aa8.68□□□□□ -1.02
EXD1-201ENST00000314992 MST1RQ04912 1400 aa8.68□□□□□ -1.02
EXD1-201ENST00000314992 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
EXD1-201ENST00000314992 EID1Q9Y6B2 187 aa8.67□□□□□ -1.02
EXD1-201ENST00000314992 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
EXD1-201ENST00000314992 HFM1A2PYH4 1435 aa8.67□□□□□ -1.02
EXD1-201ENST00000314992 PLEKHG1Q9ULL1 1385 aa8.67□□□□□ -1.02
EXD1-201ENST00000314992 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
EXD1-201ENST00000314992 CEP152O94986 1710 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 XRN1Q8IZH2 1706 aaKnown RBP8.66□□□□□ -1.02
EXD1-201ENST00000314992 CAMTA1Q9Y6Y1 1673 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 ARHGEF5Q12774 1597 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 SLIT2O94813 1529 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 NUP188Q5SRE5 1749 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 LMTK2Q8IWU2 1503 aa8.66□□□□□ -1.02
EXD1-201ENST00000314992 ZFYVE9O95405 1425 aa8.65□□□□□ -1.02
EXD1-201ENST00000314992 ADGRB2O60241 1585 aa8.65□□□□□ -1.02
EXD1-201ENST00000314992 EHBP1L1Q8N3D4 1523 aa8.65□□□□□ -1.02
EXD1-201ENST00000314992 NWD2Q9ULI1 1742 aa8.65□□□□□ -1.02
EXD1-201ENST00000314992 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.03
EXD1-201ENST00000314992 USP21Q9UK80 565 aa8.65□□□□□ -1.03
EXD1-201ENST00000314992 CASZ1Q86V15 1759 aa8.65□□□□□ -1.03
EXD1-201ENST00000314992 RPRD2Q5VT52 1461 aaKnown RBP8.65□□□□□ -1.03
EXD1-201ENST00000314992 WASHC2CQ9Y4E1 1318 aa8.64□□□□□ -1.03
EXD1-201ENST00000314992 RGPD3A6NKT7 1758 aaPredicted RBP8.64□□□□□ -1.03
EXD1-201ENST00000314992 RGPD4Q7Z3J3 1758 aa8.64□□□□□ -1.03
EXD1-201ENST00000314992 C8orf37Q96NL8 207 aa8.64□□□□□ -1.03
EXD1-201ENST00000314992 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
EXD1-201ENST00000314992 SRCAPQ6ZRS2 3230 aa8.63□□□□□ -1.03
EXD1-201ENST00000314992 PRELPP51888 382 aa8.63□□□□□ -1.03
EXD1-201ENST00000314992 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
EXD1-201ENST00000314992 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
EXD1-201ENST00000314992 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
EXD1-201ENST00000314992 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
EXD1-201ENST00000314992 DCAF8L1A6NGE4 600 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms