RNA–Protein interactions for RNA: ENST00000314636.2

DHFR2-201, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-201ENST00000314636 GSE1Q14687 1217 aa10.92□□□□□ -0.66
DHFR2-201ENST00000314636 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
DHFR2-201ENST00000314636 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
DHFR2-201ENST00000314636 PLEKHH1Q9ULM0 1364 aa10.92□□□□□ -0.66
DHFR2-201ENST00000314636 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
DHFR2-201ENST00000314636 NFKBIBQ15653 356 aa10.91□□□□□ -0.66
DHFR2-201ENST00000314636 ASXL1Q8IXJ9 1541 aa10.91□□□□□ -0.66
DHFR2-201ENST00000314636 SCAF11Q99590 1463 aaKnown RBP10.9□□□□□ -0.66
DHFR2-201ENST00000314636 SYNMO15061 1565 aa10.9□□□□□ -0.66
DHFR2-201ENST00000314636 SCAPERQ9BY12 1400 aa10.9□□□□□ -0.66
DHFR2-201ENST00000314636 TRMT2AQ8IZ69 625 aaKnown RBP10.9□□□□□ -0.66
DHFR2-201ENST00000314636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.67
DHFR2-201ENST00000314636 E9PSI1 815 aa10.89□□□□□ -0.67
DHFR2-201ENST00000314636 C8orf34Q49A92 452 aa10.89□□□□□ -0.67
DHFR2-201ENST00000314636 EFCAB2Q5VUJ9 269 aa10.89□□□□□ -0.67
DHFR2-201ENST00000314636 SKAP1Q86WV1 359 aa10.89□□□□□ -0.67
DHFR2-201ENST00000314636 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
DHFR2-201ENST00000314636 NKTRP30414 1462 aaKnown RBP10.88□□□□□ -0.67
DHFR2-201ENST00000314636 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
DHFR2-201ENST00000314636 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
DHFR2-201ENST00000314636 NINLQ9Y2I6 1382 aa10.87□□□□□ -0.67
DHFR2-201ENST00000314636 IQGAP1P46940 1657 aa10.87□□□□□ -0.67
DHFR2-201ENST00000314636 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
DHFR2-201ENST00000314636 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
DHFR2-201ENST00000314636 RGS3P49796 1198 aa10.86□□□□□ -0.67
DHFR2-201ENST00000314636 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
DHFR2-201ENST00000314636 PLCH2O75038 1416 aa10.86□□□□□ -0.67
DHFR2-201ENST00000314636 APAF1O14727 1248 aa10.85□□□□□ -0.67
DHFR2-201ENST00000314636 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
DHFR2-201ENST00000314636 AAMPQ13685 434 aa10.85□□□□□ -0.67
DHFR2-201ENST00000314636 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
DHFR2-201ENST00000314636 TRPM2O94759 1503 aa10.84□□□□□ -0.67
DHFR2-201ENST00000314636 PTPRTO14522 1441 aa10.84□□□□□ -0.67
DHFR2-201ENST00000314636 CCDC146Q8IYE0 955 aa10.84□□□□□ -0.67
DHFR2-201ENST00000314636 RTEL1-TNFRSF6BF6WH68 1400 aa10.84□□□□□ -0.67
DHFR2-201ENST00000314636 BECN1Q14457 450 aa10.83□□□□□ -0.68
DHFR2-201ENST00000314636 KANK1Q14678 1352 aa10.83□□□□□ -0.68
DHFR2-201ENST00000314636 SPAG9O60271 1321 aaKnown RBP10.83□□□□□ -0.68
DHFR2-201ENST00000314636 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.68
DHFR2-201ENST00000314636 CANXP27824 592 aaKnown RBP10.82□□□□□ -0.68
DHFR2-201ENST00000314636 SPHKAPQ2M3C7 1700 aa10.82□□□□□ -0.68
DHFR2-201ENST00000314636 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
DHFR2-201ENST00000314636 BCAR3O75815 825 aa10.81□□□□□ -0.68
DHFR2-201ENST00000314636 RTN4Q9NQC3 1192 aaKnown RBP10.81□□□□□ -0.68
DHFR2-201ENST00000314636 KDM5AP29375 1690 aaKnown RBP10.81□□□□□ -0.68
DHFR2-201ENST00000314636 CLUAP1Q96AJ1 413 aa10.81□□□□□ -0.68
DHFR2-201ENST00000314636 KIAA1210Q9ULL0 1709 aa10.8□□□□□ -0.68
DHFR2-201ENST00000314636 ABCC1P33527 1531 aa10.8□□□□□ -0.68
DHFR2-201ENST00000314636 CEP152O94986 1710 aa10.8□□□□□ -0.68
DHFR2-201ENST00000314636 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
DHFR2-201ENST00000314636 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
DHFR2-201ENST00000314636 POLR3AO14802 1390 aaPredicted RBP10.8□□□□□ -0.68
DHFR2-201ENST00000314636 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
DHFR2-201ENST00000314636 TRAPPC8Q9Y2L5 1435 aa10.79□□□□□ -0.68
DHFR2-201ENST00000314636 UPF2Q9HAU5 1272 aaKnown RBP10.79□□□□□ -0.68
DHFR2-201ENST00000314636 FRAT2O75474 233 aaPredicted RBP10.79□□□□□ -0.68
DHFR2-201ENST00000314636 IGHDP01880 384 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 ANO8Q9HCE9 1232 aaPredicted RBP10.78□□□□□ -0.68
DHFR2-201ENST00000314636 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 ZMYM3Q14202 1370 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 MYOM1P52179 1685 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
DHFR2-201ENST00000314636 CLTCL1P53675 1640 aa10.77□□□□□ -0.68
DHFR2-201ENST00000314636 TET3O43151 1660 aa10.77□□□□□ -0.69
DHFR2-201ENST00000314636 MYOM2P54296 1465 aa10.77□□□□□ -0.69
DHFR2-201ENST00000314636 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
DHFR2-201ENST00000314636 RUNDC1Q96C34 613 aa10.77□□□□□ -0.69
DHFR2-201ENST00000314636 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 ARAP3Q8WWN8 1544 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 ERVK-7P63135 1459 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 WDR63Q8IWG1 891 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 CARD14Q9BXL6 1004 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
DHFR2-201ENST00000314636 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
DHFR2-201ENST00000314636 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 USP19O94966 1318 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 DEPDC5O75140 1603 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 AFAP1Q8N556 730 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
DHFR2-201ENST00000314636 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
DHFR2-201ENST00000314636 CFAP53Q96M91 514 aa10.74□□□□□ -0.69
DHFR2-201ENST00000314636 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
DHFR2-201ENST00000314636 RARSP54136 660 aaKnown RBP10.74□□□□□ -0.69
DHFR2-201ENST00000314636 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
DHFR2-201ENST00000314636 KIF3BO15066 747 aa10.73□□□□□ -0.69
DHFR2-201ENST00000314636 CCDC27Q2M243 656 aa10.73□□□□□ -0.69
DHFR2-201ENST00000314636 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
DHFR2-201ENST00000314636 DMRT2Q9Y5R5 561 aa10.73□□□□□ -0.69
DHFR2-201ENST00000314636 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
DHFR2-201ENST00000314636 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
DHFR2-201ENST00000314636 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
DHFR2-201ENST00000314636 MYH16Q9H6N6 1097 aa10.72□□□□□ -0.69
DHFR2-201ENST00000314636 CHD1O14646 1710 aa10.72□□□□□ -0.69
DHFR2-201ENST00000314636 ZCCHC11Q5TAX3 1644 aaKnown RBP10.72□□□□□ -0.69
DHFR2-201ENST00000314636 ADGRF5Q8IZF2 1346 aa10.72□□□□□ -0.69
DHFR2-201ENST00000314636 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.69
DHFR2-201ENST00000314636 PHF23Q9BUL5 403 aaPredicted RBP10.71□□□□□ -0.69
DHFR2-201ENST00000314636 SEC24BO95487 1268 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms