RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
CKS2-201ENST00000314355 GCC2Q8IWJ2 1684 aa19.08■□□□□ 0.64
CKS2-201ENST00000314355 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
CKS2-201ENST00000314355 ZNF326Q5BKZ1 582 aaKnown RBP19.06■□□□□ 0.64
CKS2-201ENST00000314355 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
CKS2-201ENST00000314355 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
CKS2-201ENST00000314355 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
CKS2-201ENST00000314355 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
CKS2-201ENST00000314355 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
CKS2-201ENST00000314355 TMEM94Q12767 1356 aa19.02■□□□□ 0.64
CKS2-201ENST00000314355 E9PCH4 1651 aa19.01■□□□□ 0.63
CKS2-201ENST00000314355 STRCP1A6NGW2 1772 aa18.99■□□□□ 0.63
CKS2-201ENST00000314355 MSH6P52701 1360 aa18.99■□□□□ 0.63
CKS2-201ENST00000314355 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
CKS2-201ENST00000314355 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
CKS2-201ENST00000314355 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
CKS2-201ENST00000314355 TMEM131LA2VDJ0 1609 aa18.98■□□□□ 0.63
CKS2-201ENST00000314355 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
CKS2-201ENST00000314355 NAIPQ13075 1403 aa18.97■□□□□ 0.63
CKS2-201ENST00000314355 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
CKS2-201ENST00000314355 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
CKS2-201ENST00000314355 ILDR2Q71H61 639 aa18.94■□□□□ 0.62
CKS2-201ENST00000314355 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
CKS2-201ENST00000314355 HFM1A2PYH4 1435 aa18.93■□□□□ 0.62
CKS2-201ENST00000314355 FAM135BQ49AJ0 1406 aa18.92■□□□□ 0.62
CKS2-201ENST00000314355 SLAIN2Q9P270 581 aa18.92■□□□□ 0.62
CKS2-201ENST00000314355 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
CKS2-201ENST00000314355 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
CKS2-201ENST00000314355 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
CKS2-201ENST00000314355 ATF3P18847 181 aa18.91■□□□□ 0.62
CKS2-201ENST00000314355 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
CKS2-201ENST00000314355 SOCS7O14512 581 aa18.9■□□□□ 0.62
CKS2-201ENST00000314355 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
CKS2-201ENST00000314355 C19orf44Q9H6X5 657 aa18.89■□□□□ 0.61
CKS2-201ENST00000314355 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
CKS2-201ENST00000314355 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
CKS2-201ENST00000314355 ALKQ9UM73 1620 aa18.86■□□□□ 0.61
CKS2-201ENST00000314355 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
CKS2-201ENST00000314355 ADAMTS13Q76LX8 1427 aa18.86■□□□□ 0.61
CKS2-201ENST00000314355 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
CKS2-201ENST00000314355 TRPM2O94759 1503 aa18.85■□□□□ 0.61
CKS2-201ENST00000314355 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
CKS2-201ENST00000314355 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
CKS2-201ENST00000314355 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
CKS2-201ENST00000314355 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
CKS2-201ENST00000314355 KIF1BO60333 1816 aa18.8■□□□□ 0.6
CKS2-201ENST00000314355 FOXD1Q16676 465 aa18.78■□□□□ 0.6
CKS2-201ENST00000314355 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
CKS2-201ENST00000314355 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
CKS2-201ENST00000314355 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
CKS2-201ENST00000314355 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
CKS2-201ENST00000314355 METP08581 1390 aa18.75■□□□□ 0.59
CKS2-201ENST00000314355 SETBP1Q9Y6X0 1596 aa18.75■□□□□ 0.59
CKS2-201ENST00000314355 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
CKS2-201ENST00000314355 JCADQ9P266 1359 aa18.74■□□□□ 0.59
CKS2-201ENST00000314355 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
CKS2-201ENST00000314355 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
CKS2-201ENST00000314355 DCCP43146 1447 aa18.7■□□□□ 0.58
CKS2-201ENST00000314355 MEX3CQ5U5Q3 659 aaKnown RBP18.7■□□□□ 0.58
CKS2-201ENST00000314355 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
CKS2-201ENST00000314355 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
CKS2-201ENST00000314355 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
CKS2-201ENST00000314355 SPATA31A6Q5VVP1 1343 aa18.68■□□□□ 0.58
CKS2-201ENST00000314355 PHLPP1O60346 1717 aa18.67■□□□□ 0.58
CKS2-201ENST00000314355 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
CKS2-201ENST00000314355 NRXN3Q9Y4C0 1643 aa18.67■□□□□ 0.58
CKS2-201ENST00000314355 STK26Q9P289 416 aa18.64■□□□□ 0.57
CKS2-201ENST00000314355 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
CKS2-201ENST00000314355 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
CKS2-201ENST00000314355 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
CKS2-201ENST00000314355 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
CKS2-201ENST00000314355 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
CKS2-201ENST00000314355 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
CKS2-201ENST00000314355 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
CKS2-201ENST00000314355 HRCP23327 699 aa18.61■□□□□ 0.57
CKS2-201ENST00000314355 ZNF772Q68DY9 489 aaPredicted RBP18.61■□□□□ 0.57
CKS2-201ENST00000314355 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
CKS2-201ENST00000314355 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
CKS2-201ENST00000314355 MST1RQ04912 1400 aa18.6■□□□□ 0.57
CKS2-201ENST00000314355 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
CKS2-201ENST00000314355 PPLO60437 1756 aa18.58■□□□□ 0.57
CKS2-201ENST00000314355 SPATA31E1Q6ZUB1 1445 aa18.57■□□□□ 0.56
CKS2-201ENST00000314355 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
CKS2-201ENST00000314355 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
CKS2-201ENST00000314355 ESCO1Q5FWF5 840 aa18.56■□□□□ 0.56
CKS2-201ENST00000314355 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
CKS2-201ENST00000314355 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
CKS2-201ENST00000314355 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
CKS2-201ENST00000314355 ASXL1Q8IXJ9 1541 aa18.55■□□□□ 0.56
CKS2-201ENST00000314355 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
CKS2-201ENST00000314355 ORAI2Q96SN7 254 aa18.55■□□□□ 0.56
CKS2-201ENST00000314355 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
CKS2-201ENST00000314355 LRPPRCP42704 1394 aaKnown RBP18.55■□□□□ 0.56
CKS2-201ENST00000314355 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
CKS2-201ENST00000314355 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
CKS2-201ENST00000314355 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
CKS2-201ENST00000314355 SIRT1Q96EB6 747 aa18.53■□□□□ 0.56
CKS2-201ENST00000314355 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CKS2-201ENST00000314355 DDX17Q92841 729 aaKnown RBP18.52■□□□□ 0.56
CKS2-201ENST00000314355 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms