RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 KNSTRNQ9Y448 316 aa12.8□□□□□ -0.36
LSMEM1-201ENST00000312849 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
LSMEM1-201ENST00000312849 FANCAO15360 1455 aa12.8□□□□□ -0.36
LSMEM1-201ENST00000312849 TCERG1O14776 1098 aaKnown RBP12.79□□□□□ -0.36
LSMEM1-201ENST00000312849 MYOM2P54296 1465 aa12.79□□□□□ -0.36
LSMEM1-201ENST00000312849 MYOM1P52179 1685 aa12.79□□□□□ -0.36
LSMEM1-201ENST00000312849 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
LSMEM1-201ENST00000312849 MAP3K4Q9Y6R4 1608 aa12.78□□□□□ -0.36
LSMEM1-201ENST00000312849 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
LSMEM1-201ENST00000312849 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
LSMEM1-201ENST00000312849 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
LSMEM1-201ENST00000312849 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
LSMEM1-201ENST00000312849 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
LSMEM1-201ENST00000312849 MS4A1P11836 297 aa12.76□□□□□ -0.37
LSMEM1-201ENST00000312849 MROH1Q8NDA8 1641 aa12.76□□□□□ -0.37
LSMEM1-201ENST00000312849 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
LSMEM1-201ENST00000312849 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
LSMEM1-201ENST00000312849 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
LSMEM1-201ENST00000312849 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
LSMEM1-201ENST00000312849 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
LSMEM1-201ENST00000312849 EFCAB6Q5THR3 1501 aa12.75□□□□□ -0.37
LSMEM1-201ENST00000312849 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
LSMEM1-201ENST00000312849 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
LSMEM1-201ENST00000312849 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
LSMEM1-201ENST00000312849 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
LSMEM1-201ENST00000312849 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
LSMEM1-201ENST00000312849 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
LSMEM1-201ENST00000312849 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
LSMEM1-201ENST00000312849 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
LSMEM1-201ENST00000312849 KIDINS220Q9ULH0 1771 aa12.72□□□□□ -0.37
LSMEM1-201ENST00000312849 KIF3BO15066 747 aa12.72□□□□□ -0.37
LSMEM1-201ENST00000312849 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
LSMEM1-201ENST00000312849 SETBP1Q9Y6X0 1596 aa12.72□□□□□ -0.37
LSMEM1-201ENST00000312849 NRXN1Q9ULB1 1477 aa12.71□□□□□ -0.37
LSMEM1-201ENST00000312849 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
LSMEM1-201ENST00000312849 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
LSMEM1-201ENST00000312849 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
LSMEM1-201ENST00000312849 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
LSMEM1-201ENST00000312849 ZNF521Q96K83 1311 aa12.69□□□□□ -0.38
LSMEM1-201ENST00000312849 ASXL2Q76L83 1435 aa12.69□□□□□ -0.38
LSMEM1-201ENST00000312849 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
LSMEM1-201ENST00000312849 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
LSMEM1-201ENST00000312849 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
LSMEM1-201ENST00000312849 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
LSMEM1-201ENST00000312849 ADGRB3O60242 1522 aa12.68□□□□□ -0.38
LSMEM1-201ENST00000312849 PPLO60437 1756 aa12.67□□□□□ -0.38
LSMEM1-201ENST00000312849 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
LSMEM1-201ENST00000312849 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
LSMEM1-201ENST00000312849 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
LSMEM1-201ENST00000312849 PDE4AP27815 886 aa12.66□□□□□ -0.38
LSMEM1-201ENST00000312849 BACH2Q9BYV9 841 aa12.66□□□□□ -0.38
LSMEM1-201ENST00000312849 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
LSMEM1-201ENST00000312849 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
LSMEM1-201ENST00000312849 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.38
LSMEM1-201ENST00000312849 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
LSMEM1-201ENST00000312849 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
LSMEM1-201ENST00000312849 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
LSMEM1-201ENST00000312849 PLIN1O60240 522 aa12.64□□□□□ -0.39
LSMEM1-201ENST00000312849 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
LSMEM1-201ENST00000312849 MLH3Q9UHC1 1453 aa12.64□□□□□ -0.39
LSMEM1-201ENST00000312849 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
LSMEM1-201ENST00000312849 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
LSMEM1-201ENST00000312849 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
LSMEM1-201ENST00000312849 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
LSMEM1-201ENST00000312849 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
LSMEM1-201ENST00000312849 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-201ENST00000312849 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
LSMEM1-201ENST00000312849 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-201ENST00000312849 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 KDM2BQ8NHM5 1336 aa12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 E9PSI1 815 aa12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 NOS1P29475 1434 aa12.61□□□□□ -0.39
LSMEM1-201ENST00000312849 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
LSMEM1-201ENST00000312849 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
LSMEM1-201ENST00000312849 CARD14Q9BXL6 1004 aa12.59□□□□□ -0.39
LSMEM1-201ENST00000312849 C14orf93Q9H972 538 aaKnown RBP12.59□□□□□ -0.39
LSMEM1-201ENST00000312849 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
LSMEM1-201ENST00000312849 SENP3Q9H4L4 574 aaPredicted RBP12.59□□□□□ -0.39
LSMEM1-201ENST00000312849 NPATQ14207 1427 aa12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 CAMSAP1Q5T5Y3 1602 aa12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 ABCC3O15438 1527 aa12.58□□□□□ -0.4
LSMEM1-201ENST00000312849 APAF1O14727 1248 aa12.57□□□□□ -0.4
LSMEM1-201ENST00000312849 RTL5Q5HYW3 569 aaPredicted RBP12.57□□□□□ -0.4
LSMEM1-201ENST00000312849 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
LSMEM1-201ENST00000312849 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
LSMEM1-201ENST00000312849 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
LSMEM1-201ENST00000312849 PIK3C2BO00750 1634 aa12.56□□□□□ -0.4
LSMEM1-201ENST00000312849 NEO1Q92859 1461 aa12.56□□□□□ -0.4
LSMEM1-201ENST00000312849 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
LSMEM1-201ENST00000312849 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
LSMEM1-201ENST00000312849 DEKP35659 375 aaKnown RBP12.55□□□□□ -0.4
LSMEM1-201ENST00000312849 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
LSMEM1-201ENST00000312849 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
LSMEM1-201ENST00000312849 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
LSMEM1-201ENST00000312849 NSD2O96028 1365 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms