RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
ERCC4-201ENST00000311895 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
ERCC4-201ENST00000311895 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
ERCC4-201ENST00000311895 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
ERCC4-201ENST00000311895 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
ERCC4-201ENST00000311895 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
ERCC4-201ENST00000311895 BICD2Q8TD16 824 aa10.43□□□□□ -0.74
ERCC4-201ENST00000311895 VPS37CA5D8V6 355 aaPredicted RBP10.42□□□□□ -0.74
ERCC4-201ENST00000311895 RIPK4P57078 832 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 PANK1Q8TE04 598 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 COG3Q96JB2 828 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
ERCC4-201ENST00000311895 CGNL1Q0VF96 1302 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 HOMER1Q86YM7 354 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 APPP05067 770 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
ERCC4-201ENST00000311895 EID1Q9Y6B2 187 aa10.42□□□□□ -0.74
ERCC4-201ENST00000311895 NFKBIBQ15653 356 aa10.41□□□□□ -0.74
ERCC4-201ENST00000311895 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
ERCC4-201ENST00000311895 C1orf141Q5JVX7 400 aa10.41□□□□□ -0.74
ERCC4-201ENST00000311895 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
ERCC4-201ENST00000311895 KDM4AO75164 1064 aa10.41□□□□□ -0.74
ERCC4-201ENST00000311895 DDX19BQ9UMR2 479 aa10.41□□□□□ -0.74
ERCC4-201ENST00000311895 REC8O95072 547 aa10.4□□□□□ -0.74
ERCC4-201ENST00000311895 IFIT2P09913 472 aaKnown RBP10.4□□□□□ -0.74
ERCC4-201ENST00000311895 HMOX1P09601 288 aa10.4□□□□□ -0.74
ERCC4-201ENST00000311895 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
ERCC4-201ENST00000311895 TEFQ10587 303 aa10.4□□□□□ -0.75
ERCC4-201ENST00000311895 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.75
ERCC4-201ENST00000311895 TPM1P09493 284 aa10.39□□□□□ -0.75
ERCC4-201ENST00000311895 ZKSCAN1P17029 563 aaPredicted RBP10.39□□□□□ -0.75
ERCC4-201ENST00000311895 SYNE3Q6ZMZ3 975 aa10.39□□□□□ -0.75
ERCC4-201ENST00000311895 RNF214Q8ND24 703 aa10.39□□□□□ -0.75
ERCC4-201ENST00000311895 C22orf23Q9BZE7 217 aa10.39□□□□□ -0.75
ERCC4-201ENST00000311895 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
ERCC4-201ENST00000311895 CCDC18Q5T9S5 1454 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 TRIM29Q14134 588 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 IFT57Q9NWB7 429 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 EVC2Q86UK5 1308 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
ERCC4-201ENST00000311895 CPLX1O14810 134 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 DIAPH1O60610 1272 aaKnown RBP10.38□□□□□ -0.75
ERCC4-201ENST00000311895 TPM2P07951 284 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 RUFY2Q8WXA3 655 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
ERCC4-201ENST00000311895 SASS6Q6UVJ0 657 aa10.37□□□□□ -0.75
ERCC4-201ENST00000311895 GPS2Q13227 327 aa10.37□□□□□ -0.75
ERCC4-201ENST00000311895 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.37□□□□□ -0.75
ERCC4-201ENST00000311895 BRPF3Q9ULD4 1205 aa10.37□□□□□ -0.75
ERCC4-201ENST00000311895 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 CCDC27Q2M243 656 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 CDCA7LQ96GN5 454 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
ERCC4-201ENST00000311895 CCDC70Q6NSX1 233 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 EVA1CP58658 441 aa10.36□□□□□ -0.75
ERCC4-201ENST00000311895 DHX16O60231 1041 aaKnown RBP10.35□□□□□ -0.75
ERCC4-201ENST00000311895 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
ERCC4-201ENST00000311895 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
ERCC4-201ENST00000311895 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.35□□□□□ -0.75
ERCC4-201ENST00000311895 NASPP49321 788 aaPredicted RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 KIF7Q2M1P5 1343 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 CPLX2Q6PUV4 134 aaKnown RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 IL27Q8NEV9 243 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 TTLL5Q6EMB2 1281 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 NAP1L1P55209 391 aaKnown RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 CAVIN1Q6NZI2 390 aaKnown RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
ERCC4-201ENST00000311895 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
ERCC4-201ENST00000311895 MSH5O43196 834 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
ERCC4-201ENST00000311895 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
ERCC4-201ENST00000311895 FYB1O15117 783 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 NUCB2P80303 420 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 TEX35Q5T0J7 233 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 NUTM2GQ5VZR2 741 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 MPNDQ8N594 471 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 TRDNQ13061 729 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 PDILTQ8N807 584 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 ADAMTS8Q9UP79 889 aa10.33□□□□□ -0.76
ERCC4-201ENST00000311895 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
ERCC4-201ENST00000311895 NEUROD6Q96NK8 337 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 MTMR7Q9Y216 660 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 TRAK2O60296 914 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 RNF20Q5VTR2 975 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 VPS37DQ86XT2 251 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 VGFO15240 615 aaPredicted RBP10.32□□□□□ -0.76
ERCC4-201ENST00000311895 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
ERCC4-201ENST00000311895 MNS1Q8NEH6 495 aa10.31□□□□□ -0.76
ERCC4-201ENST00000311895 TCEAL9Q9UHQ7 104 aa10.31□□□□□ -0.76
ERCC4-201ENST00000311895 ANKRD20A12PQ8NF67 263 aa10.31□□□□□ -0.76
ERCC4-201ENST00000311895 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms