RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 DUSP27Q5VZP5 1158 aa20.51■□□□□ 0.87
SOX30-202ENST00000311371 VIRMAQ69YN4 1812 aaKnown RBP20.51■□□□□ 0.87
SOX30-202ENST00000311371 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 ADCY10Q96PN6 1610 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
SOX30-202ENST00000311371 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
SOX30-202ENST00000311371 CCDC173Q0VFZ6 552 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 CHMP4BQ9H444 224 aaKnown RBP20.5■□□□□ 0.87
SOX30-202ENST00000311371 EHBP1L1Q8N3D4 1523 aa20.5■□□□□ 0.87
SOX30-202ENST00000311371 TERF1P54274 439 aa20.49■□□□□ 0.87
SOX30-202ENST00000311371 DMTNQ08495 405 aa20.48■□□□□ 0.87
SOX30-202ENST00000311371 STAC3Q96MF2 364 aa20.48■□□□□ 0.87
SOX30-202ENST00000311371 SUPT6HQ7KZ85 1726 aaKnown RBP20.48■□□□□ 0.87
SOX30-202ENST00000311371 PARD3Q8TEW0 1356 aa20.47■□□□□ 0.87
SOX30-202ENST00000311371 KDM5CP41229 1560 aa20.47■□□□□ 0.87
SOX30-202ENST00000311371 ANP32BQ92688 251 aaKnown RBP20.47■□□□□ 0.87
SOX30-202ENST00000311371 BLMP54132 1417 aaPredicted RBP20.47■□□□□ 0.87
SOX30-202ENST00000311371 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
SOX30-202ENST00000311371 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
SOX30-202ENST00000311371 ZCCHC11Q5TAX3 1644 aaKnown RBP20.46■□□□□ 0.87
SOX30-202ENST00000311371 BCAR3O75815 825 aa20.45■□□□□ 0.86
SOX30-202ENST00000311371 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
SOX30-202ENST00000311371 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
SOX30-202ENST00000311371 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
SOX30-202ENST00000311371 PPP1R9BQ96SB3 815 aa20.44■□□□□ 0.86
SOX30-202ENST00000311371 UTP14CQ5TAP6 766 aaKnown RBP20.43■□□□□ 0.86
SOX30-202ENST00000311371 MTERF4Q7Z6M4 381 aaKnown RBP20.43■□□□□ 0.86
SOX30-202ENST00000311371 EIF3AQ14152 1382 aaKnown RBP20.43■□□□□ 0.86
SOX30-202ENST00000311371 KIF14Q15058 1648 aa20.42■□□□□ 0.86
SOX30-202ENST00000311371 PLEKHH1Q9ULM0 1364 aa20.42■□□□□ 0.86
SOX30-202ENST00000311371 ZSCAN20P17040 1043 aaPredicted RBP20.42■□□□□ 0.86
SOX30-202ENST00000311371 GOLGA2Q08379 1002 aa20.42■□□□□ 0.86
SOX30-202ENST00000311371 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
SOX30-202ENST00000311371 TNNT2P45379 298 aaPredicted RBP20.4■□□□□ 0.86
SOX30-202ENST00000311371 TROQ12816 1431 aaPredicted RBP20.4■□□□□ 0.86
SOX30-202ENST00000311371 NCLP19338 710 aaKnown RBP20.4■□□□□ 0.86
SOX30-202ENST00000311371 TNPO1Q92973 898 aaKnown RBP20.4■□□□□ 0.86
SOX30-202ENST00000311371 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
SOX30-202ENST00000311371 PLEKHH2Q8IVE3 1493 aa20.39■□□□□ 0.86
SOX30-202ENST00000311371 DYNC1I1O14576 645 aa20.39■□□□□ 0.85
SOX30-202ENST00000311371 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
SOX30-202ENST00000311371 MFAP1P55081 439 aaKnown RBP20.39■□□□□ 0.85
SOX30-202ENST00000311371 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
SOX30-202ENST00000311371 CCDC94Q9BW85 323 aaPredicted RBP20.39■□□□□ 0.85
SOX30-202ENST00000311371 HSCBQ8IWL3 235 aa20.38■□□□□ 0.85
SOX30-202ENST00000311371 COG6Q9Y2V7 657 aa20.38■□□□□ 0.85
SOX30-202ENST00000311371 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
SOX30-202ENST00000311371 C22orf23Q9BZE7 217 aa20.37■□□□□ 0.85
SOX30-202ENST00000311371 CLUAP1Q96AJ1 413 aa20.37■□□□□ 0.85
SOX30-202ENST00000311371 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
SOX30-202ENST00000311371 PANK1Q8TE04 598 aa20.35■□□□□ 0.85
SOX30-202ENST00000311371 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
SOX30-202ENST00000311371 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
SOX30-202ENST00000311371 ZBTB7CA1YPR0 619 aa20.34■□□□□ 0.85
SOX30-202ENST00000311371 PER1O15534 1290 aaPredicted RBP20.34■□□□□ 0.85
SOX30-202ENST00000311371 CBX1P83916 185 aa20.34■□□□□ 0.85
SOX30-202ENST00000311371 SKOR2Q2VWA4 1001 aaPredicted RBP20.34■□□□□ 0.85
SOX30-202ENST00000311371 VGLL3A8MV65 326 aa20.33■□□□□ 0.85
SOX30-202ENST00000311371 SLFN5Q08AF3 891 aa20.33■□□□□ 0.84
SOX30-202ENST00000311371 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
SOX30-202ENST00000311371 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
SOX30-202ENST00000311371 ZNF500O60304 480 aaPredicted RBP20.31■□□□□ 0.84
SOX30-202ENST00000311371 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
SOX30-202ENST00000311371 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
SOX30-202ENST00000311371 NOL7Q9UMY1 257 aaKnown RBP20.31■□□□□ 0.84
SOX30-202ENST00000311371 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
SOX30-202ENST00000311371 TCOF1Q13428 1488 aaKnown RBP20.31■□□□□ 0.84
SOX30-202ENST00000311371 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.31■□□□□ 0.84
SOX30-202ENST00000311371 TMEM51Q9NW97 253 aa20.3■□□□□ 0.84
SOX30-202ENST00000311371 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
SOX30-202ENST00000311371 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
SOX30-202ENST00000311371 SASS6Q6UVJ0 657 aa20.29■□□□□ 0.84
SOX30-202ENST00000311371 INSRP06213 1382 aa20.29■□□□□ 0.84
SOX30-202ENST00000311371 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
SOX30-202ENST00000311371 E9PCH4 1651 aa20.28■□□□□ 0.84
SOX30-202ENST00000311371 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
SOX30-202ENST00000311371 IPO4Q8TEX9 1081 aaKnown RBP20.28■□□□□ 0.84
SOX30-202ENST00000311371 PANK3Q9H999 370 aa20.28■□□□□ 0.84
SOX30-202ENST00000311371 ZNF521Q96K83 1311 aa20.27■□□□□ 0.84
SOX30-202ENST00000311371 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.84
SOX30-202ENST00000311371 RALGAPBQ86X10 1494 aa20.27■□□□□ 0.83
SOX30-202ENST00000311371 CSPP1Q1MSJ5 1256 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 TSC1Q92574 1164 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 PKD2Q13563 968 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 GTPBP4Q9BZE4 634 aaKnown RBP20.26■□□□□ 0.83
SOX30-202ENST00000311371 DDX49Q9Y6V7 483 aaKnown RBP20.26■□□□□ 0.83
SOX30-202ENST00000311371 KIF20AO95235 890 aa20.26■□□□□ 0.83
SOX30-202ENST00000311371 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
SOX30-202ENST00000311371 DDIT3P35638 169 aa20.25■□□□□ 0.83
SOX30-202ENST00000311371 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
SOX30-202ENST00000311371 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
SOX30-202ENST00000311371 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
SOX30-202ENST00000311371 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
SOX30-202ENST00000311371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.24■□□□□ 0.83
SOX30-202ENST00000311371 ITSN2Q9NZM3 1697 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms