RNA–Protein interactions for RNA: ENST00000311124.8

SLC19A1-201, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC19A1, Length 3,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-201ENST00000311124 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 EIF3AQ14152 1382 aaKnown RBP18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 PLEKHH1Q9ULM0 1364 aa18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 ITSN2Q9NZM3 1697 aa18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
SLC19A1-201ENST00000311124 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
SLC19A1-201ENST00000311124 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
SLC19A1-201ENST00000311124 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
SLC19A1-201ENST00000311124 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.53
SLC19A1-201ENST00000311124 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
SLC19A1-201ENST00000311124 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
SLC19A1-201ENST00000311124 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
SLC19A1-201ENST00000311124 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
SLC19A1-201ENST00000311124 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
SLC19A1-201ENST00000311124 MAPK8IP3Q9UPT6 1336 aa18.3■□□□□ 0.52
SLC19A1-201ENST00000311124 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
SLC19A1-201ENST00000311124 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
SLC19A1-201ENST00000311124 EIF4G3O43432 1585 aaKnown RBP18.29■□□□□ 0.52
SLC19A1-201ENST00000311124 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
SLC19A1-201ENST00000311124 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
SLC19A1-201ENST00000311124 A2MP01023 1474 aa18.28■□□□□ 0.52
SLC19A1-201ENST00000311124 IGHDP01880 384 aa18.28■□□□□ 0.52
SLC19A1-201ENST00000311124 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
SLC19A1-201ENST00000311124 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.52
SLC19A1-201ENST00000311124 MTHFSP49914 203 aa18.27■□□□□ 0.52
SLC19A1-201ENST00000311124 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
SLC19A1-201ENST00000311124 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
SLC19A1-201ENST00000311124 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SLC19A1-201ENST00000311124 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
SLC19A1-201ENST00000311124 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
SLC19A1-201ENST00000311124 POGKQ9P215 609 aa18.24■□□□□ 0.51
SLC19A1-201ENST00000311124 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
SLC19A1-201ENST00000311124 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
SLC19A1-201ENST00000311124 WWC1Q8IX03 1113 aa18.24■□□□□ 0.51
SLC19A1-201ENST00000311124 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
SLC19A1-201ENST00000311124 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
SLC19A1-201ENST00000311124 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
SLC19A1-201ENST00000311124 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
SLC19A1-201ENST00000311124 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
SLC19A1-201ENST00000311124 ADGBQ8N7X0 1667 aa18.22■□□□□ 0.51
SLC19A1-201ENST00000311124 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
SLC19A1-201ENST00000311124 SCAPERQ9BY12 1400 aa18.2■□□□□ 0.5
SLC19A1-201ENST00000311124 CABP2Q9NPB3 220 aa18.2■□□□□ 0.5
SLC19A1-201ENST00000311124 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
SLC19A1-201ENST00000311124 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
SLC19A1-201ENST00000311124 ELL2O00472 640 aaPredicted RBP18.19■□□□□ 0.5
SLC19A1-201ENST00000311124 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
SLC19A1-201ENST00000311124 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
SLC19A1-201ENST00000311124 SEC24BO95487 1268 aa18.18■□□□□ 0.5
SLC19A1-201ENST00000311124 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
SLC19A1-201ENST00000311124 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
SLC19A1-201ENST00000311124 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
SLC19A1-201ENST00000311124 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
SLC19A1-201ENST00000311124 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
SLC19A1-201ENST00000311124 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
SLC19A1-201ENST00000311124 NUP160Q12769 1436 aa18.15■□□□□ 0.5
SLC19A1-201ENST00000311124 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
SLC19A1-201ENST00000311124 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.5
SLC19A1-201ENST00000311124 HSCBQ8IWL3 235 aa18.14■□□□□ 0.49
SLC19A1-201ENST00000311124 DZIP1LQ8IYY4 767 aaKnown RBP18.14■□□□□ 0.49
SLC19A1-201ENST00000311124 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.49
SLC19A1-201ENST00000311124 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
SLC19A1-201ENST00000311124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.492e-7■□□□□ 10
SLC19A1-201ENST00000311124 TRAPPC8Q9Y2L5 1435 aa18.14■□□□□ 0.49
SLC19A1-201ENST00000311124 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
SLC19A1-201ENST00000311124 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
SLC19A1-201ENST00000311124 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
SLC19A1-201ENST00000311124 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
SLC19A1-201ENST00000311124 EXOSC9Q06265 439 aaKnown RBP18.12■□□□□ 0.49
SLC19A1-201ENST00000311124 APBB1O00213 710 aa18.12■□□□□ 0.49
SLC19A1-201ENST00000311124 PCDHB15Q9Y5E8 787 aa18.11■□□□□ 0.49
SLC19A1-201ENST00000311124 RLBP1P12271 317 aa18.11■□□□□ 0.49
SLC19A1-201ENST00000311124 ZMYM4Q5VZL5 1548 aa18.1■□□□□ 0.49
SLC19A1-201ENST00000311124 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
SLC19A1-201ENST00000311124 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
SLC19A1-201ENST00000311124 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
SLC19A1-201ENST00000311124 KDM5DQ9BY66 1539 aa18.1■□□□□ 0.49
SLC19A1-201ENST00000311124 SOX12O15370 315 aa18.09■□□□□ 0.49
SLC19A1-201ENST00000311124 RIPK4P57078 832 aa18.09■□□□□ 0.49
SLC19A1-201ENST00000311124 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
SLC19A1-201ENST00000311124 CDC42BPAQ5VT25 1732 aa18.08■□□□□ 0.49
SLC19A1-201ENST00000311124 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
SLC19A1-201ENST00000311124 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.48
SLC19A1-201ENST00000311124 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
SLC19A1-201ENST00000311124 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
SLC19A1-201ENST00000311124 C22orf23Q9BZE7 217 aa18.07■□□□□ 0.48
SLC19A1-201ENST00000311124 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
SLC19A1-201ENST00000311124 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
SLC19A1-201ENST00000311124 GOLGA6L3A6NEY3 463 aa18.06■□□□□ 0.48
SLC19A1-201ENST00000311124 MLECQ14165 292 aa18.05■□□□□ 0.48
SLC19A1-201ENST00000311124 POLR1AO95602 1720 aaPredicted RBP18.05■□□□□ 0.48
SLC19A1-201ENST00000311124 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
SLC19A1-201ENST00000311124 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
SLC19A1-201ENST00000311124 ABCA8O94911 1581 aa18.04■□□□□ 0.48
SLC19A1-201ENST00000311124 HMOX1P09601 288 aa18.04■□□□□ 0.48
SLC19A1-201ENST00000311124 C1orf115Q9H7X2 142 aa18.03■□□□□ 0.48
SLC19A1-201ENST00000311124 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
SLC19A1-201ENST00000311124 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
SLC19A1-201ENST00000311124 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms