RNA–Protein interactions for RNA: ENST00000310454.10

GPD2-201, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 6,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-201ENST00000310454 RDXP35241 583 aaKnown RBP20.54■□□□□ 0.88
GPD2-201ENST00000310454 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
GPD2-201ENST00000310454 EXOC6Q8TAG9 804 aa20.53■□□□□ 0.88
GPD2-201ENST00000310454 CHMP5Q9NZZ3 219 aa20.53■□□□□ 0.88
GPD2-201ENST00000310454 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
GPD2-201ENST00000310454 APPP05067 770 aa20.52■□□□□ 0.88
GPD2-201ENST00000310454 ODF2Q5BJF6 829 aa20.52■□□□□ 0.88
GPD2-201ENST00000310454 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.88
GPD2-201ENST00000310454 KIF15Q9NS87 1388 aa20.52■□□□□ 0.88
GPD2-201ENST00000310454 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.87
GPD2-201ENST00000310454 CAGE1Q8TC20 777 aa20.52■□□□□ 0.87
GPD2-201ENST00000310454 RRP1P56182 461 aaKnown RBP20.51■□□□□ 0.87
GPD2-201ENST00000310454 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
GPD2-201ENST00000310454 FOSBP53539 338 aa20.51■□□□□ 0.87
GPD2-201ENST00000310454 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
GPD2-201ENST00000310454 VPS37CA5D8V6 355 aaPredicted RBP20.51■□□□□ 0.87
GPD2-201ENST00000310454 NUP155O75694 1391 aa20.51■□□□□ 0.87
GPD2-201ENST00000310454 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
GPD2-201ENST00000310454 CCDC39Q9UFE4 941 aa20.5■□□□□ 0.87
GPD2-201ENST00000310454 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
GPD2-201ENST00000310454 SMC3Q9UQE7 1217 aa20.49■□□□□ 0.87
GPD2-201ENST00000310454 CCDC43Q96MW1 224 aaKnown RBP20.48■□□□□ 0.87
GPD2-201ENST00000310454 IFIT2P09913 472 aaKnown RBP20.48■□□□□ 0.87
GPD2-201ENST00000310454 ERCC4Q92889 916 aaPredicted RBP20.48■□□□□ 0.87
GPD2-201ENST00000310454 PDILTQ8N807 584 aa20.48■□□□□ 0.87
GPD2-201ENST00000310454 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
GPD2-201ENST00000310454 CCDC73Q6ZRK6 1079 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 E9PSI1 815 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 RNF20Q5VTR2 975 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 CCDC173Q0VFZ6 552 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 TRDNQ13061 729 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
GPD2-201ENST00000310454 ERICH2A1L162 156 aa20.46■□□□□ 0.87
GPD2-201ENST00000310454 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
GPD2-201ENST00000310454 PLCD4Q9BRC7 762 aa20.46■□□□□ 0.87
GPD2-201ENST00000310454 OLFM4Q6UX06 510 aa20.46■□□□□ 0.87
GPD2-201ENST00000310454 SKIDA1Q1XH10 827 aa20.46■□□□□ 0.87
GPD2-201ENST00000310454 NUCB2P80303 420 aa20.45■□□□□ 0.86
GPD2-201ENST00000310454 EPS15P42566 896 aa20.45■□□□□ 0.86
GPD2-201ENST00000310454 CCDC66A2RUB6 948 aa20.44■□□□□ 0.86
GPD2-201ENST00000310454 C9orf78Q9NZ63 289 aaPredicted RBP20.44■□□□□ 0.86
GPD2-201ENST00000310454 NAT10Q9H0A0 1025 aaKnown RBP20.44■□□□□ 0.86
GPD2-201ENST00000310454 ZFYVE27Q5T4F4 411 aa20.44■□□□□ 0.86
GPD2-201ENST00000310454 MTERF4Q7Z6M4 381 aaKnown RBP20.44■□□□□ 0.86
GPD2-201ENST00000310454 NGEFQ8N5V2 710 aa20.44■□□□□ 0.86
GPD2-201ENST00000310454 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
GPD2-201ENST00000310454 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
GPD2-201ENST00000310454 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
GPD2-201ENST00000310454 TTLL5Q6EMB2 1281 aa20.43■□□□□ 0.86
GPD2-201ENST00000310454 MYO6Q9UM54 1294 aa20.43■□□□□ 0.86
GPD2-201ENST00000310454 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
GPD2-201ENST00000310454 SAFBQ15424 915 aaKnown RBP eCLIP20.42■□□□□ 0.86
GPD2-201ENST00000310454 ANKRD30AQ9BXX3 1397 aa20.42■□□□□ 0.86
GPD2-201ENST00000310454 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
GPD2-201ENST00000310454 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
GPD2-201ENST00000310454 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
GPD2-201ENST00000310454 NASPP49321 788 aaPredicted RBP20.4■□□□□ 0.86
GPD2-201ENST00000310454 OFD1O75665 1012 aa20.4■□□□□ 0.86
GPD2-201ENST00000310454 VPS37DQ86XT2 251 aa20.4■□□□□ 0.86
GPD2-201ENST00000310454 LEKR1Q6ZMV7 388 aa20.39■□□□□ 0.85
GPD2-201ENST00000310454 TSPYL1Q9H0U9 437 aa20.39■□□□□ 0.85
GPD2-201ENST00000310454 NUTM2FA1L443 756 aa20.39■□□□□ 0.85
GPD2-201ENST00000310454 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
GPD2-201ENST00000310454 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
GPD2-201ENST00000310454 PANK3Q9H999 370 aa20.38■□□□□ 0.85
GPD2-201ENST00000310454 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
GPD2-201ENST00000310454 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
GPD2-201ENST00000310454 MRE11P49959 708 aa20.37■□□□□ 0.85
GPD2-201ENST00000310454 L3MBTL2Q969R5 705 aa20.37■□□□□ 0.85
GPD2-201ENST00000310454 ROCK1Q13464 1354 aa20.36■□□□□ 0.85
GPD2-201ENST00000310454 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
GPD2-201ENST00000310454 NECTIN2Q92692 538 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 FMN1Q68DA7 1419 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 MSH5O43196 834 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 TEFQ10587 303 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 COG3Q96JB2 828 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 CWC22Q9HCG8 908 aaKnown RBP20.35■□□□□ 0.85
GPD2-201ENST00000310454 BRMS1Q9HCU9 246 aa20.35■□□□□ 0.85
GPD2-201ENST00000310454 AXDND1Q5T1B0 1012 aaPredicted RBP20.34■□□□□ 0.85
GPD2-201ENST00000310454 TRAK1Q9UPV9 953 aa20.34■□□□□ 0.85
GPD2-201ENST00000310454 SMC2O95347 1197 aa20.34■□□□□ 0.85
GPD2-201ENST00000310454 LETM1O95202 739 aaPredicted RBP20.33■□□□□ 0.85
GPD2-201ENST00000310454 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.85
GPD2-201ENST00000310454 DZIP1LQ8IYY4 767 aaKnown RBP20.33■□□□□ 0.85
GPD2-201ENST00000310454 RNF214Q8ND24 703 aa20.33■□□□□ 0.84
GPD2-201ENST00000310454 C22orf23Q9BZE7 217 aa20.33■□□□□ 0.84
GPD2-201ENST00000310454 CCP110O43303 1012 aa20.32■□□□□ 0.84
GPD2-201ENST00000310454 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
GPD2-201ENST00000310454 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
GPD2-201ENST00000310454 TRIM5Q9C035 493 aa20.32■□□□□ 0.84
GPD2-201ENST00000310454 NFKBIBQ15653 356 aa20.31■□□□□ 0.84
GPD2-201ENST00000310454 SMARCE1Q969G3 411 aa20.31■□□□□ 0.84
GPD2-201ENST00000310454 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
GPD2-201ENST00000310454 ZRSR2Q15696 482 aaKnown RBP20.31■□□□□ 0.84
GPD2-201ENST00000310454 KIF3BO15066 747 aa20.31■□□□□ 0.84
GPD2-201ENST00000310454 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
GPD2-201ENST00000310454 ERC2O15083 957 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms