RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 SCAF11Q99590 1463 aaKnown RBP32.71■■■□□ 2.83
SNCB-201ENST00000310112 ERVK-7P63135 1459 aa32.69■■■□□ 2.82
SNCB-201ENST00000310112 SLC24A1O60721 1099 aa32.67■■■□□ 2.82
SNCB-201ENST00000310112 CHGAP10645 457 aaKnown RBP32.67■■■□□ 2.82
SNCB-201ENST00000310112 CLTCQ00610 1675 aaKnown RBP32.67■■■□□ 2.82
SNCB-201ENST00000310112 EIF3AQ14152 1382 aaKnown RBP32.67■■■□□ 2.82
SNCB-201ENST00000310112 SETBP1Q9Y6X0 1596 aa32.66■■■□□ 2.82
SNCB-201ENST00000310112 ADGRF5Q8IZF2 1346 aa32.64■■■□□ 2.82
SNCB-201ENST00000310112 ZFYVE9O95405 1425 aa32.63■■■□□ 2.81
SNCB-201ENST00000310112 SPATA31D1Q6ZQQ2 1576 aa32.62■■■□□ 2.81
SNCB-201ENST00000310112 PIK3C2GO75747 1445 aa32.61■■■□□ 2.81
SNCB-201ENST00000310112 IDI1Q13907 227 aa32.61■■■□□ 2.81
SNCB-201ENST00000310112 TESK2Q96S53 571 aa32.61■■■□□ 2.81
SNCB-201ENST00000310112 VGFO15240 615 aaPredicted RBP32.6■■■□□ 2.81
SNCB-201ENST00000310112 YTHDC1Q96MU7 727 aaKnown RBP32.6■■■□□ 2.81
SNCB-201ENST00000310112 TMF1P82094 1093 aa32.59■■■□□ 2.81
SNCB-201ENST00000310112 NEXMIFQ5QGS0 1516 aa32.59■■■□□ 2.81
SNCB-201ENST00000310112 TMEM131LA2VDJ0 1609 aa32.58■■■□□ 2.81
SNCB-201ENST00000310112 ESF1Q9H501 851 aaKnown RBP32.58■■■□□ 2.81
SNCB-201ENST00000310112 C14orf93Q9H972 538 aaKnown RBP32.55■■■□□ 2.8
SNCB-201ENST00000310112 CDCA8Q53HL2 280 aa32.54■■■□□ 2.8
SNCB-201ENST00000310112 CFAP70Q5T0N1 1121 aa32.54■■■□□ 2.8
SNCB-201ENST00000310112 TRHP20396 242 aaPredicted RBP32.52■■■□□ 2.8
SNCB-201ENST00000310112 PRKRIP1Q9H875 184 aaPredicted RBP32.52■■■□□ 2.8
SNCB-201ENST00000310112 POLR3GLQ9BT43 218 aa32.51■■■□□ 2.79
SNCB-201ENST00000310112 DNAJC5Q9H3Z4 198 aa32.5■■■□□ 2.79
SNCB-201ENST00000310112 MYO3AQ8NEV4 1616 aa32.49■■■□□ 2.79
SNCB-201ENST00000310112 MLECQ14165 292 aa32.48■■■□□ 2.79
SNCB-201ENST00000310112 FBXO31Q5XUX0 539 aaPredicted RBP32.48■■■□□ 2.79
SNCB-201ENST00000310112 ZMYM3Q14202 1370 aa32.48■■■□□ 2.79
SNCB-201ENST00000310112 KTN1Q86UP2 1357 aaKnown RBP32.48■■■□□ 2.79
SNCB-201ENST00000310112 DISP3Q9P2K9 1392 aa32.46■■■□□ 2.79
SNCB-201ENST00000310112 SBNO2Q9Y2G9 1366 aa32.46■■■□□ 2.79
SNCB-201ENST00000310112 ADGRB1O14514 1584 aa32.44■■■□□ 2.78
SNCB-201ENST00000310112 MYO5BQ9ULV0 1848 aa32.44■■■□□ 2.78
SNCB-201ENST00000310112 STAG3Q9UJ98 1225 aa32.39■■■□□ 2.78
SNCB-201ENST00000310112 KDM5AP29375 1690 aaKnown RBP32.38■■■□□ 2.77
SNCB-201ENST00000310112 A2ML1A8K2U0 1454 aa32.37■■■□□ 2.77
SNCB-201ENST00000310112 TNRQ92752 1358 aa32.33■■■□□ 2.77
SNCB-201ENST00000310112 CENPJQ9HC77 1338 aaPredicted RBP32.32■■■□□ 2.76
SNCB-201ENST00000310112 RALBP1Q15311 655 aa32.32■■■□□ 2.76
SNCB-201ENST00000310112 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.29■■■□□ 2.76
SNCB-201ENST00000310112 RIMS2Q9UQ26 1411 aa32.27■■■□□ 2.76
SNCB-201ENST00000310112 HDGFP51858 240 aaKnown RBP32.27■■■□□ 2.76
SNCB-201ENST00000310112 PER1O15534 1290 aaPredicted RBP32.25■■■□□ 2.75
SNCB-201ENST00000310112 NLRP1Q9C000 1473 aa32.25■■■□□ 2.75
SNCB-201ENST00000310112 PUS7Q96PZ0 661 aaKnown RBP32.24■■■□□ 2.75
SNCB-201ENST00000310112 QRICH2Q9H0J4 1663 aa32.24■■■□□ 2.75
SNCB-201ENST00000310112 ARHGEF28Q8N1W1 1705 aaKnown RBP32.22■■■□□ 2.75
SNCB-201ENST00000310112 PANK3Q9H999 370 aa32.21■■■□□ 2.75
SNCB-201ENST00000310112 MRS2Q9HD23 443 aa32.21■■■□□ 2.75
SNCB-201ENST00000310112 TRAK1Q9UPV9 953 aa32.21■■■□□ 2.75
SNCB-201ENST00000310112 ALKQ9UM73 1620 aa32.21■■■□□ 2.75
SNCB-201ENST00000310112 FER1L4A9Z1Z3 1794 aa32.2■■■□□ 2.75
SNCB-201ENST00000310112 NUTM2DQ5VT03 806 aaPredicted RBP32.2■■■□□ 2.75
SNCB-201ENST00000310112 TMEM132EQ6IEE7 984 aa32.19■■■□□ 2.74
SNCB-201ENST00000310112 ASXL1Q8IXJ9 1541 aa32.18■■■□□ 2.74
SNCB-201ENST00000310112 MYOM1P52179 1685 aa32.18■■■□□ 2.74
SNCB-201ENST00000310112 MYBBP1AQ9BQG0 1328 aaKnown RBP32.18■■■□□ 2.74
SNCB-201ENST00000310112 PARD3Q8TEW0 1356 aa32.18■■■□□ 2.74
SNCB-201ENST00000310112 UBR1Q8IWV7 1749 aa32.15■■■□□ 2.74
SNCB-201ENST00000310112 C3P01024 1663 aa32.15■■■□□ 2.74
SNCB-201ENST00000310112 BRD4O60885 1362 aaPredicted RBP32.15■■■□□ 2.74
SNCB-201ENST00000310112 YTHDC2Q9H6S0 1430 aaKnown RBP32.13■■■□□ 2.73
SNCB-201ENST00000310112 NPC1L1Q9UHC9 1359 aa32.13■■■□□ 2.73
SNCB-201ENST00000310112 DLC1Q96QB1 1528 aa32.1■■■□□ 2.73
SNCB-201ENST00000310112 EVC2Q86UK5 1308 aa32.1■■■□□ 2.73
SNCB-201ENST00000310112 CCDC184Q52MB2 194 aa32.09■■■□□ 2.73
SNCB-201ENST00000310112 KNSTRNQ9Y448 316 aa32.09■■■□□ 2.73
SNCB-201ENST00000310112 TMEM2Q9UHN6 1383 aa32.09■■■□□ 2.73
SNCB-201ENST00000310112 SETD1AO15047 1707 aaKnown RBP32.08■■■□□ 2.73
SNCB-201ENST00000310112 PTPRMP28827 1452 aa32.06■■■□□ 2.72
SNCB-201ENST00000310112 NLRP13Q86W25 1043 aa32.06■■■□□ 2.72
SNCB-201ENST00000310112 LRPPRCP42704 1394 aaKnown RBP32.05■■■□□ 2.72
SNCB-201ENST00000310112 TMC1Q8TDI8 760 aa32.04■■■□□ 2.72
SNCB-201ENST00000310112 SCAF1Q9H7N4 1312 aaKnown RBP32.02■■■□□ 2.72
SNCB-201ENST00000310112 NRXN3Q9Y4C0 1643 aa32.02■■■□□ 2.72
SNCB-201ENST00000310112 ABCC11Q96J66 1382 aa32.01■■■□□ 2.72
SNCB-201ENST00000310112 NINLQ9Y2I6 1382 aa32■■■□□ 2.71
SNCB-201ENST00000310112 TULP4Q9NRJ4 1543 aa32■■■□□ 2.71
SNCB-201ENST00000310112 AMER1Q5JTC6 1135 aaPredicted RBP31.98■■■□□ 2.71
SNCB-201ENST00000310112 SLIT1O75093 1534 aa31.98■■■□□ 2.71
SNCB-201ENST00000310112 HNRNPUQ00839 825 aaKnown RBP eCLIP31.97■■■□□ 2.71
SNCB-201ENST00000310112 FAM9BQ8IZU0 186 aa31.97■■■□□ 2.71
SNCB-201ENST00000310112 ARHGAP23Q9P227 1491 aa31.97■■■□□ 2.71
SNCB-201ENST00000310112 SIRT1Q96EB6 747 aa31.96■■■□□ 2.71
SNCB-201ENST00000310112 STK26Q9P289 416 aa31.96■■■□□ 2.71
SNCB-201ENST00000310112 GTF3C3Q9Y5Q9 886 aa31.96■■■□□ 2.71
SNCB-201ENST00000310112 PLEKHG1Q9ULL1 1385 aa31.96■■■□□ 2.71
SNCB-201ENST00000310112 CEBPAP49715 358 aaPredicted RBP31.95■■■□□ 2.71
SNCB-201ENST00000310112 POGKQ9P215 609 aa31.95■■■□□ 2.71
SNCB-201ENST00000310112 KNDC1Q76NI1 1749 aa31.95■■■□□ 2.7
SNCB-201ENST00000310112 PNISRQ8TF01 805 aaKnown RBP31.94■■■□□ 2.7
SNCB-201ENST00000310112 CNGB1Q14028 1251 aaPredicted RBP31.94■■■□□ 2.7
SNCB-201ENST00000310112 CC2D1BQ5T0F9 858 aaKnown RBP31.94■■■□□ 2.7
SNCB-201ENST00000310112 PRAM1Q96QH2 718 aa31.93■■■□□ 2.7
SNCB-201ENST00000310112 TECPR2O15040 1411 aa31.92■■■□□ 2.7
SNCB-201ENST00000310112 ATAD2Q6PL18 1390 aa31.92■■■□□ 2.7
SNCB-201ENST00000310112 EID1Q9Y6B2 187 aa31.92■■■□□ 2.7
SNCB-201ENST00000310112 ADAMTSL3P82987 1691 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms