RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MSH5O43196 834 aa15.31■□□□□ 0.04
PTPN2-201ENST00000309660 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
PTPN2-201ENST00000309660 ARAP3Q8WWN8 1544 aa15.31■□□□□ 0.04
PTPN2-201ENST00000309660 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
PTPN2-201ENST00000309660 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
PTPN2-201ENST00000309660 MADDQ8WXG6 1647 aa15.3■□□□□ 0.04
PTPN2-201ENST00000309660 SPHKAPQ2M3C7 1700 aa15.3■□□□□ 0.04
PTPN2-201ENST00000309660 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
PTPN2-201ENST00000309660 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
PTPN2-201ENST00000309660 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN2-201ENST00000309660 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
PTPN2-201ENST00000309660 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
PTPN2-201ENST00000309660 ZNF518AQ6AHZ1 1483 aa15.28■□□□□ 0.04
PTPN2-201ENST00000309660 NOS1P29475 1434 aa15.28■□□□□ 0.04
PTPN2-201ENST00000309660 TET3O43151 1660 aa15.27■□□□□ 0.04
PTPN2-201ENST00000309660 LAMC1P11047 1609 aa15.27■□□□□ 0.03
PTPN2-201ENST00000309660 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
PTPN2-201ENST00000309660 CENPJQ9HC77 1338 aaPredicted RBP15.25■□□□□ 0.03
PTPN2-201ENST00000309660 RNF17Q9BXT8 1623 aaKnown RBP15.24■□□□□ 0.03
PTPN2-201ENST00000309660 FANCIQ9NVI1 1328 aa15.24■□□□□ 0.03
PTPN2-201ENST00000309660 CEP152O94986 1710 aa15.24■□□□□ 0.03
PTPN2-201ENST00000309660 CARD14Q9BXL6 1004 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 DEPDC5O75140 1603 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 STK26Q9P289 416 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 APAF1O14727 1248 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
PTPN2-201ENST00000309660 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
PTPN2-201ENST00000309660 KIDINS220Q9ULH0 1771 aa15.22■□□□□ 0.03
PTPN2-201ENST00000309660 NPATQ14207 1427 aa15.22■□□□□ 0.03
PTPN2-201ENST00000309660 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
PTPN2-201ENST00000309660 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.02
PTPN2-201ENST00000309660 EFCAB6Q5THR3 1501 aa15.21■□□□□ 0.02
PTPN2-201ENST00000309660 MROH1Q8NDA8 1641 aa15.21■□□□□ 0.02
PTPN2-201ENST00000309660 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 IQGAP1P46940 1657 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 BLMP54132 1417 aaPredicted RBP15.2■□□□□ 0.02
PTPN2-201ENST00000309660 VWDEQ8N2E2 1590 aa15.2■□□□□ 0.02
PTPN2-201ENST00000309660 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
PTPN2-201ENST00000309660 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
PTPN2-201ENST00000309660 SLC24A1O60721 1099 aa15.18■□□□□ 0.02
PTPN2-201ENST00000309660 ERVK-7P63135 1459 aa15.18■□□□□ 0.02
PTPN2-201ENST00000309660 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
PTPN2-201ENST00000309660 MAP3K4Q9Y6R4 1608 aa15.17■□□□□ 0.02
PTPN2-201ENST00000309660 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
PTPN2-201ENST00000309660 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
PTPN2-201ENST00000309660 KIF1BO60333 1816 aa15.16■□□□□ 0.02
PTPN2-201ENST00000309660 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
PTPN2-201ENST00000309660 IDI1Q13907 227 aa15.16■□□□□ 0.02
PTPN2-201ENST00000309660 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
PTPN2-201ENST00000309660 SYNMO15061 1565 aa15.15■□□□□ 0.02
PTPN2-201ENST00000309660 DUSP27Q5VZP5 1158 aa15.15■□□□□ 0.02
PTPN2-201ENST00000309660 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
PTPN2-201ENST00000309660 MYOM2P54296 1465 aa15.15■□□□□ 0.02
PTPN2-201ENST00000309660 NSD3Q9BZ95 1437 aa15.14■□□□□ 0.01
PTPN2-201ENST00000309660 VGFO15240 615 aaPredicted RBP15.14■□□□□ 0.01
PTPN2-201ENST00000309660 MLECQ14165 292 aa15.14■□□□□ 0.01
PTPN2-201ENST00000309660 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
PTPN2-201ENST00000309660 MROH2AA6NES4 1674 aa15.14■□□□□ 0.01
PTPN2-201ENST00000309660 SRPK2P78362 688 aaKnown RBP15.13■□□□□ 0.01
PTPN2-201ENST00000309660 KDM5AP29375 1690 aaKnown RBP15.13■□□□□ 0.01
PTPN2-201ENST00000309660 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
PTPN2-201ENST00000309660 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
PTPN2-201ENST00000309660 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PTPN2-201ENST00000309660 FBXO31Q5XUX0 539 aaPredicted RBP15.12■□□□□ 0.01
PTPN2-201ENST00000309660 PIK3C2GO75747 1445 aa15.11■□□□□ 0.01
PTPN2-201ENST00000309660 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
PTPN2-201ENST00000309660 HECW2Q9P2P5 1572 aa15.11■□□□□ 0.01
PTPN2-201ENST00000309660 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
PTPN2-201ENST00000309660 YEATS2Q9ULM3 1422 aa15.1■□□□□ 0.01
PTPN2-201ENST00000309660 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
PTPN2-201ENST00000309660 SLFN5Q08AF3 891 aa15.1■□□□□ 0.01
PTPN2-201ENST00000309660 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
PTPN2-201ENST00000309660 BCAR3O75815 825 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 MTHFSP49914 203 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.09■□□□□ 0.01
PTPN2-201ENST00000309660 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
PTPN2-201ENST00000309660 NBR1Q14596 966 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 POGKQ9P215 609 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
PTPN2-201ENST00000309660 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 ADGRB3O60242 1522 aa15.09■□□□□ 0.01
PTPN2-201ENST00000309660 ABCC3O15438 1527 aa15.08■□□□□ 0.01
PTPN2-201ENST00000309660 RPGRIP1LQ68CZ1 1315 aa15.08■□□□□ 0.01
PTPN2-201ENST00000309660 MYOM1P52179 1685 aa15.08■□□□□ 0
PTPN2-201ENST00000309660 NPC1L1Q9UHC9 1359 aa15.08■□□□□ 0
PTPN2-201ENST00000309660 LMTK2Q8IWU2 1503 aa15.07■□□□□ 0
PTPN2-201ENST00000309660 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
PTPN2-201ENST00000309660 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
PTPN2-201ENST00000309660 INSRP06213 1382 aa15.07■□□□□ 0
PTPN2-201ENST00000309660 PDE4AP27815 886 aa15.07■□□□□ 0
PTPN2-201ENST00000309660 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
PTPN2-201ENST00000309660 ZNF521Q96K83 1311 aa15.07■□□□□ 0
PTPN2-201ENST00000309660 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
PTPN2-201ENST00000309660 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
PTPN2-201ENST00000309660 CFAP53Q96M91 514 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms