RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
CCDC110-201ENST00000307588 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
CCDC110-201ENST00000307588 IDI1Q13907 227 aa22.72■■□□□ 1.23
CCDC110-201ENST00000307588 CLTCQ00610 1675 aaKnown RBP22.72■■□□□ 1.23
CCDC110-201ENST00000307588 FBXO31Q5XUX0 539 aaPredicted RBP22.71■■□□□ 1.23
CCDC110-201ENST00000307588 CFAP70Q5T0N1 1121 aa22.7■■□□□ 1.22
CCDC110-201ENST00000307588 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
CCDC110-201ENST00000307588 ERVK-7P63135 1459 aa22.69■■□□□ 1.22
CCDC110-201ENST00000307588 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
CCDC110-201ENST00000307588 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
CCDC110-201ENST00000307588 SLC52A1Q9NWF4 448 aa22.68■■□□□ 1.22
CCDC110-201ENST00000307588 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
CCDC110-201ENST00000307588 MLECQ14165 292 aa22.67■■□□□ 1.22
CCDC110-201ENST00000307588 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
CCDC110-201ENST00000307588 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
CCDC110-201ENST00000307588 PRKRIP1Q9H875 184 aaPredicted RBP22.66■■□□□ 1.22
CCDC110-201ENST00000307588 TMEM131LA2VDJ0 1609 aa22.65■■□□□ 1.22
CCDC110-201ENST00000307588 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.21
CCDC110-201ENST00000307588 SPATA31D1Q6ZQQ2 1576 aa22.62■■□□□ 1.21
CCDC110-201ENST00000307588 SETBP1Q9Y6X0 1596 aa22.61■■□□□ 1.21
CCDC110-201ENST00000307588 C14orf93Q9H972 538 aaKnown RBP22.6■■□□□ 1.21
CCDC110-201ENST00000307588 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
CCDC110-201ENST00000307588 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
CCDC110-201ENST00000307588 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
CCDC110-201ENST00000307588 TMF1P82094 1093 aa22.58■■□□□ 1.2
CCDC110-201ENST00000307588 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
CCDC110-201ENST00000307588 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
CCDC110-201ENST00000307588 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
CCDC110-201ENST00000307588 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
CCDC110-201ENST00000307588 EIF3AQ14152 1382 aaKnown RBP22.55■■□□□ 1.2
CCDC110-201ENST00000307588 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
CCDC110-201ENST00000307588 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
CCDC110-201ENST00000307588 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
CCDC110-201ENST00000307588 PER1O15534 1290 aaPredicted RBP22.51■■□□□ 1.19
CCDC110-201ENST00000307588 TMEM132EQ6IEE7 984 aa22.51■■□□□ 1.19
CCDC110-201ENST00000307588 A2ML1A8K2U0 1454 aa22.5■■□□□ 1.19
CCDC110-201ENST00000307588 ESF1Q9H501 851 aaKnown RBP22.48■■□□□ 1.19
CCDC110-201ENST00000307588 TRAK1Q9UPV9 953 aa22.46■■□□□ 1.19
CCDC110-201ENST00000307588 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
CCDC110-201ENST00000307588 CNGB1Q14028 1251 aaPredicted RBP22.45■■□□□ 1.18
CCDC110-201ENST00000307588 SBNO2Q9Y2G9 1366 aa22.45■■□□□ 1.18
CCDC110-201ENST00000307588 PANK3Q9H999 370 aa22.45■■□□□ 1.18
CCDC110-201ENST00000307588 MYOM1P52179 1685 aa22.43■■□□□ 1.18
CCDC110-201ENST00000307588 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
CCDC110-201ENST00000307588 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
CCDC110-201ENST00000307588 CDCA8Q53HL2 280 aa22.42■■□□□ 1.18
CCDC110-201ENST00000307588 MRS2Q9HD23 443 aa22.42■■□□□ 1.18
CCDC110-201ENST00000307588 TNRQ92752 1358 aa22.41■■□□□ 1.18
CCDC110-201ENST00000307588 KDM5AP29375 1690 aaKnown RBP22.41■■□□□ 1.18
CCDC110-201ENST00000307588 QRICH2Q9H0J4 1663 aa22.41■■□□□ 1.18
CCDC110-201ENST00000307588 ARHGEF28Q8N1W1 1705 aaKnown RBP22.41■■□□□ 1.18
CCDC110-201ENST00000307588 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
CCDC110-201ENST00000307588 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
CCDC110-201ENST00000307588 GTF3C3Q9Y5Q9 886 aa22.39■■□□□ 1.18
CCDC110-201ENST00000307588 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
CCDC110-201ENST00000307588 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.17
CCDC110-201ENST00000307588 SLC24A1O60721 1099 aa22.39■■□□□ 1.17
CCDC110-201ENST00000307588 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
CCDC110-201ENST00000307588 RALBP1Q15311 655 aa22.37■■□□□ 1.17
CCDC110-201ENST00000307588 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
CCDC110-201ENST00000307588 PTPRMP28827 1452 aa22.34■■□□□ 1.17
CCDC110-201ENST00000307588 C3P01024 1663 aa22.34■■□□□ 1.17
CCDC110-201ENST00000307588 MYBBP1AQ9BQG0 1328 aaKnown RBP22.34■■□□□ 1.17
CCDC110-201ENST00000307588 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
CCDC110-201ENST00000307588 SETD1AO15047 1707 aaKnown RBP22.33■■□□□ 1.17
CCDC110-201ENST00000307588 FER1L4A9Z1Z3 1794 aa22.33■■□□□ 1.17
CCDC110-201ENST00000307588 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
CCDC110-201ENST00000307588 YTHDC2Q9H6S0 1430 aaKnown RBP22.32■■□□□ 1.16
CCDC110-201ENST00000307588 NRXN3Q9Y4C0 1643 aa22.32■■□□□ 1.16
CCDC110-201ENST00000307588 CC2D1BQ5T0F9 858 aaKnown RBP22.3■■□□□ 1.16
CCDC110-201ENST00000307588 STK26Q9P289 416 aa22.3■■□□□ 1.16
CCDC110-201ENST00000307588 TULP4Q9NRJ4 1543 aa22.29■■□□□ 1.16
CCDC110-201ENST00000307588 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCDC110-201ENST00000307588 AMER1Q5JTC6 1135 aaPredicted RBP22.29■■□□□ 1.16
CCDC110-201ENST00000307588 BRD4O60885 1362 aaPredicted RBP22.28■■□□□ 1.16
CCDC110-201ENST00000307588 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
CCDC110-201ENST00000307588 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
CCDC110-201ENST00000307588 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
CCDC110-201ENST00000307588 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
CCDC110-201ENST00000307588 KNSTRNQ9Y448 316 aa22.25■■□□□ 1.15
CCDC110-201ENST00000307588 CARD14Q9BXL6 1004 aa22.25■■□□□ 1.15
CCDC110-201ENST00000307588 TMC1Q8TDI8 760 aa22.24■■□□□ 1.15
CCDC110-201ENST00000307588 SAFB2Q14151 953 aaKnown RBP eCLIP22.24■■□□□ 1.15
CCDC110-201ENST00000307588 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
CCDC110-201ENST00000307588 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
CCDC110-201ENST00000307588 PUS7Q96PZ0 661 aaKnown RBP22.22■■□□□ 1.15
CCDC110-201ENST00000307588 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
CCDC110-201ENST00000307588 NPC1L1Q9UHC9 1359 aa22.22■■□□□ 1.15
CCDC110-201ENST00000307588 LRPPRCP42704 1394 aaKnown RBP22.21■■□□□ 1.15
CCDC110-201ENST00000307588 METP08581 1390 aa22.21■■□□□ 1.15
CCDC110-201ENST00000307588 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
CCDC110-201ENST00000307588 SLC12A5Q9H2X9 1139 aa22.21■■□□□ 1.15
CCDC110-201ENST00000307588 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
CCDC110-201ENST00000307588 LTKP29376 864 aa22.19■■□□□ 1.14
CCDC110-201ENST00000307588 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
CCDC110-201ENST00000307588 ABCC11Q96J66 1382 aa22.19■■□□□ 1.14
CCDC110-201ENST00000307588 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
CCDC110-201ENST00000307588 POGKQ9P215 609 aa22.17■■□□□ 1.14
CCDC110-201ENST00000307588 ADAMTS13Q76LX8 1427 aa22.16■■□□□ 1.14
CCDC110-201ENST00000307588 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms