RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF608Q9ULD9 1512 aaPredicted RBP10.47□□□□□ -0.73
PCDHB1-201ENST00000306549 WDR7Q9Y4E6 1490 aa10.47□□□□□ -0.73
PCDHB1-201ENST00000306549 CAMSAP2Q08AD1 1489 aa10.47□□□□□ -0.73
PCDHB1-201ENST00000306549 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
PCDHB1-201ENST00000306549 TXNDC2Q86VQ3 553 aa10.47□□□□□ -0.73
PCDHB1-201ENST00000306549 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
PCDHB1-201ENST00000306549 PDE3BQ13370 1112 aa10.46□□□□□ -0.73
PCDHB1-201ENST00000306549 USP47Q96K76 1375 aa10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 LRRFIP1Q32MZ4 808 aaKnown RBP10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 ARHGEF11O15085 1522 aa10.46□□□□□ -0.74
PCDHB1-201ENST00000306549 SETD1BQ9UPS6 1966 aaKnown RBP10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 DUOX2Q9NRD8 1548 aa10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 HMMRO75330 724 aa10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 CNTLNQ9NXG0 1405 aa10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
PCDHB1-201ENST00000306549 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
PCDHB1-201ENST00000306549 SOX12O15370 315 aa10.44□□□□□ -0.74
PCDHB1-201ENST00000306549 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
PCDHB1-201ENST00000306549 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
PCDHB1-201ENST00000306549 LRPPRCP42704 1394 aaKnown RBP10.43□□□□□ -0.74
PCDHB1-201ENST00000306549 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
PCDHB1-201ENST00000306549 NEUROD2Q15784 382 aa10.43□□□□□ -0.74
PCDHB1-201ENST00000306549 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 CHMP4CQ96CF2 233 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 USP35Q9P2H5 1018 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 CEP89Q96ST8 783 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 KIF1BO60333 1816 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 ASXL2Q76L83 1435 aa10.42□□□□□ -0.74
PCDHB1-201ENST00000306549 TEFQ10587 303 aa10.41□□□□□ -0.74
PCDHB1-201ENST00000306549 PROSER2Q86WR7 435 aaPredicted RBP10.41□□□□□ -0.74
PCDHB1-201ENST00000306549 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
PCDHB1-201ENST00000306549 TTC5Q8N0Z6 440 aa10.41□□□□□ -0.74
PCDHB1-201ENST00000306549 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
PCDHB1-201ENST00000306549 TAF7LQ5H9L4 462 aa10.4□□□□□ -0.74
PCDHB1-201ENST00000306549 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
PCDHB1-201ENST00000306549 TPM4P67936 248 aa10.4□□□□□ -0.74
PCDHB1-201ENST00000306549 MYBBP1AQ9BQG0 1328 aaKnown RBP10.4□□□□□ -0.75
PCDHB1-201ENST00000306549 NEXNQ0ZGT2 675 aa10.4□□□□□ -0.75
PCDHB1-201ENST00000306549 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 GORABQ5T7V8 394 aa10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 RAPGEF4Q8WZA2 1011 aa10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 DDX58O95786 925 aaKnown RBP10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
PCDHB1-201ENST00000306549 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
PCDHB1-201ENST00000306549 A0A0U1RQG5 324 aaPredicted RBP10.38□□□□□ -0.75
PCDHB1-201ENST00000306549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.75
PCDHB1-201ENST00000306549 NUP160Q12769 1436 aa10.37□□□□□ -0.75
PCDHB1-201ENST00000306549 ZNF330Q9Y3S2 320 aaPredicted RBP10.37□□□□□ -0.75
PCDHB1-201ENST00000306549 PLCH2O75038 1416 aa10.37□□□□□ -0.75
PCDHB1-201ENST00000306549 ST20-MTHFSA0A0A6YYL1 179 aa10.37□□□□□ -0.75
PCDHB1-201ENST00000306549 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
PCDHB1-201ENST00000306549 PTMSP20962 102 aa10.36□□□□□ -0.75
PCDHB1-201ENST00000306549 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
PCDHB1-201ENST00000306549 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
PCDHB1-201ENST00000306549 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
PCDHB1-201ENST00000306549 PHF23Q9BUL5 403 aaPredicted RBP10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 ZNF644Q9H582 1327 aaPredicted RBP10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 NINLQ9Y2I6 1382 aa10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 KDM5BQ9UGL1 1544 aa10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 AAMPQ13685 434 aa10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
PCDHB1-201ENST00000306549 IRX6P78412 446 aaPredicted RBP10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 PMFBP1Q8TBY8 1022 aa10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 MIER1Q8N108 512 aa10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 CEP170Q5SW79 1584 aa10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 A2MP01023 1474 aa10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 NEO1Q92859 1461 aa10.34□□□□□ -0.75
PCDHB1-201ENST00000306549 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.75
PCDHB1-201ENST00000306549 SHANK2Q9UPX8 1470 aa10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 MARCH6O60337 910 aa10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 DIAPH1O60610 1272 aaKnown RBP10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
PCDHB1-201ENST00000306549 RGS3P49796 1198 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 VPS53Q5VIR6 699 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 ATP10BO94823 1461 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 FRAT2O75474 233 aaPredicted RBP10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 TCEAL9Q9UHQ7 104 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 ABTB2Q8N961 1025 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 SMC4Q9NTJ3 1288 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
PCDHB1-201ENST00000306549 SYAP1Q96A49 352 aaPredicted RBP10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 PANK3Q9H999 370 aa10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 DHX29Q7Z478 1369 aaKnown RBP10.31□□□□□ -0.76
PCDHB1-201ENST00000306549 E9PSI1 815 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms