RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 KIAA1210Q9ULL0 1709 aa8.99□□□□□ -0.97
USP47-201ENST00000305481 HNRNPUQ00839 825 aaKnown RBP eCLIP8.99□□□□□ -0.97
USP47-201ENST00000305481 PER1O15534 1290 aaPredicted RBP8.98□□□□□ -0.97
USP47-201ENST00000305481 CFAP70Q5T0N1 1121 aa8.98□□□□□ -0.97
USP47-201ENST00000305481 SCAF11Q99590 1463 aaKnown RBP8.98□□□□□ -0.97
USP47-201ENST00000305481 FAM9BQ8IZU0 186 aa8.98□□□□□ -0.97
USP47-201ENST00000305481 SYNMO15061 1565 aa8.98□□□□□ -0.97
USP47-201ENST00000305481 ARHGAP31Q2M1Z3 1444 aa8.97□□□□□ -0.97
USP47-201ENST00000305481 TMF1P82094 1093 aa8.97□□□□□ -0.97
USP47-201ENST00000305481 SUPT16HQ9Y5B9 1047 aaKnown RBP8.97□□□□□ -0.97
USP47-201ENST00000305481 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
USP47-201ENST00000305481 CHGAP10645 457 aaKnown RBP8.96□□□□□ -0.97
USP47-201ENST00000305481 ZC3H13Q5T200 1668 aaKnown RBP8.96□□□□□ -0.98
USP47-201ENST00000305481 KIF13AQ9H1H9 1805 aa8.95□□□□□ -0.98
USP47-201ENST00000305481 PPLO60437 1756 aa8.95□□□□□ -0.98
USP47-201ENST00000305481 PANK3Q9H999 370 aa8.95□□□□□ -0.98
USP47-201ENST00000305481 PIK3C2GO75747 1445 aa8.94□□□□□ -0.98
USP47-201ENST00000305481 KTN1Q86UP2 1357 aaKnown RBP8.94□□□□□ -0.98
USP47-201ENST00000305481 IDI1Q13907 227 aa8.94□□□□□ -0.98
USP47-201ENST00000305481 PARD3Q8TEW0 1356 aa8.94□□□□□ -0.98
USP47-201ENST00000305481 RALBP1Q15311 655 aa8.93□□□□□ -0.98
USP47-201ENST00000305481 PNISRQ8TF01 805 aaKnown RBP8.93□□□□□ -0.98
USP47-201ENST00000305481 REREQ9P2R6 1566 aa8.93□□□□□ -0.98
USP47-201ENST00000305481 C14orf93Q9H972 538 aaKnown RBP8.93□□□□□ -0.98
USP47-201ENST00000305481 RPGRIP1LQ68CZ1 1315 aa8.93□□□□□ -0.98
USP47-201ENST00000305481 MYBBP1AQ9BQG0 1328 aaKnown RBP8.93□□□□□ -0.98
USP47-201ENST00000305481 EIF3AQ14152 1382 aaKnown RBP8.92□□□□□ -0.98
USP47-201ENST00000305481 AGLP35573 1532 aa8.92□□□□□ -0.98
USP47-201ENST00000305481 SETBP1Q9Y6X0 1596 aa8.92□□□□□ -0.98
USP47-201ENST00000305481 FBXO31Q5XUX0 539 aaPredicted RBP8.92□□□□□ -0.98
USP47-201ENST00000305481 NEXMIFQ5QGS0 1516 aa8.92□□□□□ -0.98
USP47-201ENST00000305481 ADGRB1O14514 1584 aa8.92□□□□□ -0.98
USP47-201ENST00000305481 PREX1Q8TCU6 1659 aa8.92□□□□□ -0.98
USP47-201ENST00000305481 BRD4O60885 1362 aaPredicted RBP8.91□□□□□ -0.98
USP47-201ENST00000305481 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
USP47-201ENST00000305481 ZBED9Q6R2W3 1325 aa8.91□□□□□ -0.98
USP47-201ENST00000305481 TMC1Q8TDI8 760 aa8.91□□□□□ -0.98
USP47-201ENST00000305481 ERVK-7P63135 1459 aa8.91□□□□□ -0.98
USP47-201ENST00000305481 CC2D1BQ5T0F9 858 aaKnown RBP8.91□□□□□ -0.98
USP47-201ENST00000305481 SLC52A1Q9NWF4 448 aa8.91□□□□□ -0.98
USP47-201ENST00000305481 MYOM1P52179 1685 aa8.9□□□□□ -0.98
USP47-201ENST00000305481 TMEM132EQ6IEE7 984 aa8.9□□□□□ -0.98
USP47-201ENST00000305481 MYO3AQ8NEV4 1616 aa8.9□□□□□ -0.98
USP47-201ENST00000305481 LRPPRCP42704 1394 aaKnown RBP8.9□□□□□ -0.98
USP47-201ENST00000305481 TMEM131LA2VDJ0 1609 aa8.9□□□□□ -0.99
USP47-201ENST00000305481 FKBP8Q14318 412 aa8.89□□□□□ -0.99
USP47-201ENST00000305481 CDCA8Q53HL2 280 aa8.89□□□□□ -0.99
USP47-201ENST00000305481 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
USP47-201ENST00000305481 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
USP47-201ENST00000305481 NLRP13Q86W25 1043 aa8.89□□□□□ -0.99
USP47-201ENST00000305481 TRAK1Q9UPV9 953 aa8.89□□□□□ -0.99
USP47-201ENST00000305481 PPP6R1Q9UPN7 881 aa8.88□□□□□ -0.99
USP47-201ENST00000305481 SBNO2Q9Y2G9 1366 aa8.88□□□□□ -0.99
USP47-201ENST00000305481 ARHGEF40Q8TER5 1519 aa8.88□□□□□ -0.99
USP47-201ENST00000305481 AMER1Q5JTC6 1135 aaPredicted RBP8.88□□□□□ -0.99
USP47-201ENST00000305481 ZFYVE9O95405 1425 aa8.88□□□□□ -0.99
USP47-201ENST00000305481 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
USP47-201ENST00000305481 CLTCQ00610 1675 aaKnown RBP8.88□□□□□ -0.99
USP47-201ENST00000305481 CENPJQ9HC77 1338 aaPredicted RBP8.87□□□□□ -0.99
USP47-201ENST00000305481 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
USP47-201ENST00000305481 MLECQ14165 292 aa8.86□□□□□ -0.99
USP47-201ENST00000305481 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
USP47-201ENST00000305481 KNSTRNQ9Y448 316 aa8.86□□□□□ -0.99
USP47-201ENST00000305481 CARD14Q9BXL6 1004 aa8.86□□□□□ -0.99
USP47-201ENST00000305481 QRICH2Q9H0J4 1663 aa8.85□□□□□ -0.99
USP47-201ENST00000305481 ASXL1Q8IXJ9 1541 aa8.85□□□□□ -0.99
USP47-201ENST00000305481 SPATA31D1Q6ZQQ2 1576 aa8.85□□□□□ -0.99
USP47-201ENST00000305481 SENP3Q9H4L4 574 aaPredicted RBP8.85□□□□□ -0.99
USP47-201ENST00000305481 BCANQ96GW7 911 aa8.84□□□□□ -0.99
USP47-201ENST00000305481 NPC1L1Q9UHC9 1359 aa8.84□□□□□ -0.99
USP47-201ENST00000305481 ARHGEF28Q8N1W1 1705 aaKnown RBP8.84□□□□□ -0.99
USP47-201ENST00000305481 PPP2R1AP30153 589 aa8.83□□□□□ -1
USP47-201ENST00000305481 NEFLP07196 543 aa8.83□□□□□ -1
USP47-201ENST00000305481 BCL11AQ9H165 835 aa8.83□□□□□ -1
USP47-201ENST00000305481 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
USP47-201ENST00000305481 ZMYM3Q14202 1370 aa8.82□□□□□ -1
USP47-201ENST00000305481 SMG6Q86US8 1419 aaKnown RBP8.82□□□□□ -1
USP47-201ENST00000305481 TULP4Q9NRJ4 1543 aa8.81□□□□□ -1
USP47-201ENST00000305481 SLC12A5Q9H2X9 1139 aa8.81□□□□□ -1
USP47-201ENST00000305481 STK26Q9P289 416 aa8.81□□□□□ -1
USP47-201ENST00000305481 IRX6P78412 446 aaPredicted RBP8.81□□□□□ -1
USP47-201ENST00000305481 ALKQ9UM73 1620 aa8.81□□□□□ -1
USP47-201ENST00000305481 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
USP47-201ENST00000305481 PTPRMP28827 1452 aa8.8□□□□□ -1
USP47-201ENST00000305481 NUDCQ9Y266 331 aa8.8□□□□□ -1
USP47-201ENST00000305481 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
USP47-201ENST00000305481 YTHDC2Q9H6S0 1430 aaKnown RBP8.8□□□□□ -1
USP47-201ENST00000305481 INSRP06213 1382 aa8.8□□□□□ -1
USP47-201ENST00000305481 SAFB2Q14151 953 aaKnown RBP eCLIP8.79□□□□□ -1
USP47-201ENST00000305481 EVC2Q86UK5 1308 aa8.79□□□□□ -1
USP47-201ENST00000305481 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
USP47-201ENST00000305481 PUS7Q96PZ0 661 aaKnown RBP8.79□□□□□ -1
USP47-201ENST00000305481 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
USP47-201ENST00000305481 CABP2Q9NPB3 220 aa8.78□□□□□ -1
USP47-201ENST00000305481 NSD3Q9BZ95 1437 aa8.78□□□□□ -1
USP47-201ENST00000305481 PRAM1Q96QH2 718 aa8.78□□□□□ -1
USP47-201ENST00000305481 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
USP47-201ENST00000305481 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1
USP47-201ENST00000305481 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1
USP47-201ENST00000305481 SETD1AO15047 1707 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms