RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
CCDC7-202ENST00000302316 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
CCDC7-202ENST00000302316 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
CCDC7-202ENST00000302316 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
CCDC7-202ENST00000302316 TNRQ92752 1358 aa18.23■□□□□ 0.51
CCDC7-202ENST00000302316 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
CCDC7-202ENST00000302316 C3P01024 1663 aa18.21■□□□□ 0.51
CCDC7-202ENST00000302316 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
CCDC7-202ENST00000302316 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
CCDC7-202ENST00000302316 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
CCDC7-202ENST00000302316 A2ML1A8K2U0 1454 aa18.19■□□□□ 0.5
CCDC7-202ENST00000302316 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
CCDC7-202ENST00000302316 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
CCDC7-202ENST00000302316 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
CCDC7-202ENST00000302316 ST20-MTHFSA0A0A6YYL1 179 aa18.17■□□□□ 0.5
CCDC7-202ENST00000302316 CEBPAP49715 358 aaPredicted RBP18.17■□□□□ 0.5
CCDC7-202ENST00000302316 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
CCDC7-202ENST00000302316 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
CCDC7-202ENST00000302316 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CCDC7-202ENST00000302316 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
CCDC7-202ENST00000302316 C11orf95C9JLR9 678 aaPredicted RBP18.16■□□□□ 0.5
CCDC7-202ENST00000302316 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
CCDC7-202ENST00000302316 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
CCDC7-202ENST00000302316 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
CCDC7-202ENST00000302316 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
CCDC7-202ENST00000302316 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
CCDC7-202ENST00000302316 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
CCDC7-202ENST00000302316 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
CCDC7-202ENST00000302316 KDM5AP29375 1690 aaKnown RBP18.13■□□□□ 0.49
CCDC7-202ENST00000302316 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
CCDC7-202ENST00000302316 RIMS2Q9UQ26 1411 aa18.12■□□□□ 0.49
CCDC7-202ENST00000302316 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
CCDC7-202ENST00000302316 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
CCDC7-202ENST00000302316 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
CCDC7-202ENST00000302316 MIER1Q8N108 512 aa18.1■□□□□ 0.49
CCDC7-202ENST00000302316 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
CCDC7-202ENST00000302316 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.48
CCDC7-202ENST00000302316 TESK2Q96S53 571 aa18.07■□□□□ 0.48
CCDC7-202ENST00000302316 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
CCDC7-202ENST00000302316 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC7-202ENST00000302316 TMEM132EQ6IEE7 984 aa18.05■□□□□ 0.48
CCDC7-202ENST00000302316 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
CCDC7-202ENST00000302316 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
CCDC7-202ENST00000302316 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
CCDC7-202ENST00000302316 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
CCDC7-202ENST00000302316 TMF1P82094 1093 aa18.03■□□□□ 0.48
CCDC7-202ENST00000302316 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
CCDC7-202ENST00000302316 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.47
CCDC7-202ENST00000302316 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
CCDC7-202ENST00000302316 NRXN3Q9Y4C0 1643 aa17.99■□□□□ 0.47
CCDC7-202ENST00000302316 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
CCDC7-202ENST00000302316 SLIT1O75093 1534 aa17.99■□□□□ 0.47
CCDC7-202ENST00000302316 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
CCDC7-202ENST00000302316 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
CCDC7-202ENST00000302316 ANP32CO43423 234 aa17.98■□□□□ 0.47
CCDC7-202ENST00000302316 PTPRMP28827 1452 aa17.98■□□□□ 0.47
CCDC7-202ENST00000302316 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
CCDC7-202ENST00000302316 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
CCDC7-202ENST00000302316 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
CCDC7-202ENST00000302316 YTHDC2Q9H6S0 1430 aaKnown RBP17.97■□□□□ 0.47
CCDC7-202ENST00000302316 ZNF142P52746 1687 aaPredicted RBP17.96■□□□□ 0.47
CCDC7-202ENST00000302316 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
CCDC7-202ENST00000302316 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 STK26Q9P289 416 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 EID1Q9Y6B2 187 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 LTKP29376 864 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 CDCA8Q53HL2 280 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 BCANQ96GW7 911 aa17.95■□□□□ 0.46
CCDC7-202ENST00000302316 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
CCDC7-202ENST00000302316 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
CCDC7-202ENST00000302316 ADAMTS13Q76LX8 1427 aa17.9■□□□□ 0.46
CCDC7-202ENST00000302316 METP08581 1390 aa17.9■□□□□ 0.46
CCDC7-202ENST00000302316 DLC1Q96QB1 1528 aa17.89■□□□□ 0.46
CCDC7-202ENST00000302316 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCDC7-202ENST00000302316 PRAM1Q96QH2 718 aa17.87■□□□□ 0.45
CCDC7-202ENST00000302316 POGKQ9P215 609 aa17.87■□□□□ 0.45
CCDC7-202ENST00000302316 ABCC11Q96J66 1382 aa17.86■□□□□ 0.45
CCDC7-202ENST00000302316 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
CCDC7-202ENST00000302316 MYOM1P52179 1685 aa17.86■□□□□ 0.45
CCDC7-202ENST00000302316 TULP4Q9NRJ4 1543 aa17.85■□□□□ 0.45
CCDC7-202ENST00000302316 MED14O60244 1454 aa17.85■□□□□ 0.45
CCDC7-202ENST00000302316 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
CCDC7-202ENST00000302316 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
CCDC7-202ENST00000302316 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
CCDC7-202ENST00000302316 EVC2Q86UK5 1308 aa17.83■□□□□ 0.45
CCDC7-202ENST00000302316 TECPR2O15040 1411 aa17.83■□□□□ 0.45
CCDC7-202ENST00000302316 CPS1P31327 1500 aa17.83■□□□□ 0.45
CCDC7-202ENST00000302316 CCER2I3L3R5 266 aa17.83■□□□□ 0.45
CCDC7-202ENST00000302316 PANK3Q9H999 370 aa17.83■□□□□ 0.45
CCDC7-202ENST00000302316 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
CCDC7-202ENST00000302316 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
CCDC7-202ENST00000302316 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
CCDC7-202ENST00000302316 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
CCDC7-202ENST00000302316 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
CCDC7-202ENST00000302316 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
CCDC7-202ENST00000302316 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
CCDC7-202ENST00000302316 PER1O15534 1290 aaPredicted RBP17.78■□□□□ 0.44
CCDC7-202ENST00000302316 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms