RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 ITPRIPQ8IWB1 547 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 TCP11L2Q8N4U5 519 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 MTHFSP49914 203 aa22.22■■□□□ 1.15
CHRNA5-201ENST00000299565 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
CHRNA5-201ENST00000299565 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
CHRNA5-201ENST00000299565 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.15
CHRNA5-201ENST00000299565 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.15
CHRNA5-201ENST00000299565 POGKQ9P215 609 aa22.2■■□□□ 1.14
CHRNA5-201ENST00000299565 IGHDP01880 384 aa22.2■■□□□ 1.14
CHRNA5-201ENST00000299565 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
CHRNA5-201ENST00000299565 EIF3AQ14152 1382 aaKnown RBP22.19■■□□□ 1.14
CHRNA5-201ENST00000299565 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
CHRNA5-201ENST00000299565 TNNQ9UQP3 1299 aa22.17■■□□□ 1.14
CHRNA5-201ENST00000299565 FOXD4L1Q9NU39 408 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
CHRNA5-201ENST00000299565 CABP2Q9NPB3 220 aa22.15■■□□□ 1.14
CHRNA5-201ENST00000299565 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.14
CHRNA5-201ENST00000299565 KDM5CP41229 1560 aa22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 WWC1Q8IX03 1113 aa22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 RWDD1Q9H446 243 aaPredicted RBP22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 SOX12O15370 315 aa22.12■■□□□ 1.13
CHRNA5-201ENST00000299565 APBB1O00213 710 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 A2MP01023 1474 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 C8orf34Q49A92 452 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 SEC24BO95487 1268 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 MBD5Q9P267 1494 aa22.08■■□□□ 1.13
CHRNA5-201ENST00000299565 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.12
CHRNA5-201ENST00000299565 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 MLECQ14165 292 aa22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 PLEKHG5O94827 1062 aa22.05■■□□□ 1.12
CHRNA5-201ENST00000299565 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
CHRNA5-201ENST00000299565 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
CHRNA5-201ENST00000299565 ARHGEF12Q9NZN5 1544 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 EXOSC9Q06265 439 aaKnown RBP22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 TPRNQ4KMQ1 711 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 DZIP1LQ8IYY4 767 aaKnown RBP22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
CHRNA5-201ENST00000299565 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
CHRNA5-201ENST00000299565 RLBP1P12271 317 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 NCLP19338 710 aaKnown RBP22■■□□□ 1.11
CHRNA5-201ENST00000299565 PDE3AQ14432 1141 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 HSCBQ8IWL3 235 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 RARSP54136 660 aaKnown RBP21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 FBLN1P23142 703 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 RIPK4P57078 832 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 HMOX1P09601 288 aa21.98■■□□□ 1.11
CHRNA5-201ENST00000299565 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
CHRNA5-201ENST00000299565 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
CHRNA5-201ENST00000299565 PLA2R1Q13018 1463 aa21.97■■□□□ 1.11
CHRNA5-201ENST00000299565 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 NAP1L5Q96NT1 182 aaPredicted RBP21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 C1orf115Q9H7X2 142 aa21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.11
CHRNA5-201ENST00000299565 ANKRD45Q5TZF3 282 aa21.94■■□□□ 1.1
CHRNA5-201ENST00000299565 EVC2Q86UK5 1308 aa21.94■■□□□ 1.1
CHRNA5-201ENST00000299565 C22orf23Q9BZE7 217 aa21.93■■□□□ 1.1
CHRNA5-201ENST00000299565 SHANK2Q9UPX8 1470 aa21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 THUMPD2Q9BTF0 503 aaKnown RBP21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 RAPGEF3O95398 923 aa21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
CHRNA5-201ENST00000299565 NUP160Q12769 1436 aa21.9■■□□□ 1.1
CHRNA5-201ENST00000299565 ADGBQ8N7X0 1667 aa21.89■■□□□ 1.1
CHRNA5-201ENST00000299565 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.09
CHRNA5-201ENST00000299565 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 IPO8O15397 1037 aaKnown RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 BLMP54132 1417 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 TRIM44Q96DX7 344 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 TERF2IPQ9NYB0 399 aa21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms