RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
CHRNA5-201ENST00000299565 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
CHRNA5-201ENST00000299565 ITPRIPQ8IWB1 547 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 TCP11L2Q8N4U5 519 aa22.23■■□□□ 1.15
CHRNA5-201ENST00000299565 MTHFSP49914 203 aa22.22■■□□□ 1.15
CHRNA5-201ENST00000299565 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
CHRNA5-201ENST00000299565 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
CHRNA5-201ENST00000299565 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.15
CHRNA5-201ENST00000299565 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.15
CHRNA5-201ENST00000299565 POGKQ9P215 609 aa22.2■■□□□ 1.14
CHRNA5-201ENST00000299565 IGHDP01880 384 aa22.2■■□□□ 1.14
CHRNA5-201ENST00000299565 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
CHRNA5-201ENST00000299565 EIF3AQ14152 1382 aaKnown RBP22.19■■□□□ 1.14
CHRNA5-201ENST00000299565 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
CHRNA5-201ENST00000299565 TNNQ9UQP3 1299 aa22.17■■□□□ 1.14
CHRNA5-201ENST00000299565 FOXD4L1Q9NU39 408 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
CHRNA5-201ENST00000299565 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
CHRNA5-201ENST00000299565 CABP2Q9NPB3 220 aa22.15■■□□□ 1.14
CHRNA5-201ENST00000299565 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.14
CHRNA5-201ENST00000299565 KDM5CP41229 1560 aa22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 WWC1Q8IX03 1113 aa22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 RWDD1Q9H446 243 aaPredicted RBP22.13■■□□□ 1.13
CHRNA5-201ENST00000299565 SOX12O15370 315 aa22.12■■□□□ 1.13
CHRNA5-201ENST00000299565 APBB1O00213 710 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 A2MP01023 1474 aa22.11■■□□□ 1.13
CHRNA5-201ENST00000299565 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 C8orf34Q49A92 452 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 PMFBP1Q8TBY8 1022 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 SEC24BO95487 1268 aa22.1■■□□□ 1.13
CHRNA5-201ENST00000299565 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 PDZRN3Q9UPQ7 1066 aa22.09■■□□□ 1.13
CHRNA5-201ENST00000299565 MBD5Q9P267 1494 aa22.08■■□□□ 1.13
CHRNA5-201ENST00000299565 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.12
CHRNA5-201ENST00000299565 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 MLECQ14165 292 aa22.07■■□□□ 1.12
CHRNA5-201ENST00000299565 PLEKHG5O94827 1062 aa22.05■■□□□ 1.12
CHRNA5-201ENST00000299565 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
CHRNA5-201ENST00000299565 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
CHRNA5-201ENST00000299565 ARHGEF12Q9NZN5 1544 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 EXOSC9Q06265 439 aaKnown RBP22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 TPRNQ4KMQ1 711 aa22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 DZIP1LQ8IYY4 767 aaKnown RBP22.02■■□□□ 1.12
CHRNA5-201ENST00000299565 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
CHRNA5-201ENST00000299565 COL17A1Q9UMD9 1497 aaPredicted RBP22.01■■□□□ 1.11
CHRNA5-201ENST00000299565 RLBP1P12271 317 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 NCLP19338 710 aaKnown RBP22■■□□□ 1.11
CHRNA5-201ENST00000299565 PDE3AQ14432 1141 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 HSCBQ8IWL3 235 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
CHRNA5-201ENST00000299565 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 RARSP54136 660 aaKnown RBP21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 FBLN1P23142 703 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 RIPK4P57078 832 aa21.99■■□□□ 1.11
CHRNA5-201ENST00000299565 HMOX1P09601 288 aa21.98■■□□□ 1.11
CHRNA5-201ENST00000299565 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
CHRNA5-201ENST00000299565 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
CHRNA5-201ENST00000299565 PLA2R1Q13018 1463 aa21.97■■□□□ 1.11
CHRNA5-201ENST00000299565 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 NAP1L5Q96NT1 182 aaPredicted RBP21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 C1orf115Q9H7X2 142 aa21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
CHRNA5-201ENST00000299565 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.11
CHRNA5-201ENST00000299565 ANKRD45Q5TZF3 282 aa21.94■■□□□ 1.1
CHRNA5-201ENST00000299565 EVC2Q86UK5 1308 aa21.94■■□□□ 1.1
CHRNA5-201ENST00000299565 C22orf23Q9BZE7 217 aa21.93■■□□□ 1.1
CHRNA5-201ENST00000299565 SHANK2Q9UPX8 1470 aa21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 THUMPD2Q9BTF0 503 aaKnown RBP21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 RAPGEF3O95398 923 aa21.91■■□□□ 1.1
CHRNA5-201ENST00000299565 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
CHRNA5-201ENST00000299565 NUP160Q12769 1436 aa21.9■■□□□ 1.1
CHRNA5-201ENST00000299565 ADGBQ8N7X0 1667 aa21.89■■□□□ 1.1
CHRNA5-201ENST00000299565 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.09
CHRNA5-201ENST00000299565 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 IPO8O15397 1037 aaKnown RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 BLMP54132 1417 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 TRIM44Q96DX7 344 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-201ENST00000299565 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 TERF2IPQ9NYB0 399 aa21.87■■□□□ 1.09
CHRNA5-201ENST00000299565 SSH1Q8WYL5 1049 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms