RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 RALBP1Q15311 655 aa8.9□□□□□ -0.98
RAG1-201ENST00000299440 DNTTIP2Q5QJE6 756 aaKnown RBP8.89□□□□□ -0.99
RAG1-201ENST00000299440 HSCBQ8IWL3 235 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 DIAPH1O60610 1272 aaKnown RBP8.89□□□□□ -0.99
RAG1-201ENST00000299440 CCDC27Q2M243 656 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 RIC3Q7Z5B4 369 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 KIF15Q9NS87 1388 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 GGNBP2Q9H3C7 697 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 CEBPAP49715 358 aaPredicted RBP8.89□□□□□ -0.99
RAG1-201ENST00000299440 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
RAG1-201ENST00000299440 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
RAG1-201ENST00000299440 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
RAG1-201ENST00000299440 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
RAG1-201ENST00000299440 CENPJQ9HC77 1338 aaPredicted RBP8.88□□□□□ -0.99
RAG1-201ENST00000299440 CC2D2AQ9P2K1 1620 aa8.88□□□□□ -0.99
RAG1-201ENST00000299440 ZC3H6P61129 1189 aaKnown RBP8.88□□□□□ -0.99
RAG1-201ENST00000299440 BICDL1Q6ZP65 573 aa8.88□□□□□ -0.99
RAG1-201ENST00000299440 TSPYL4Q9UJ04 414 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 AKAP17AQ02040 695 aaKnown RBP8.87□□□□□ -0.99
RAG1-201ENST00000299440 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
RAG1-201ENST00000299440 ANP32EQ9BTT0 268 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 RWDD1Q9H446 243 aaPredicted RBP8.87□□□□□ -0.99
RAG1-201ENST00000299440 ERICH6BQ5W0A0 696 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 KIF6Q6ZMV9 814 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
RAG1-201ENST00000299440 RILPL2Q969X0 211 aa8.87□□□□□ -0.99
RAG1-201ENST00000299440 NRDCO43847 1150 aa8.86□□□□□ -0.99
RAG1-201ENST00000299440 PRAM1Q96QH2 718 aa8.86□□□□□ -0.99
RAG1-201ENST00000299440 KIAA2012Q0VF49 1180 aa8.86□□□□□ -0.99
RAG1-201ENST00000299440 RBM5P52756 815 aaKnown RBP eCLIP8.85□□□□□ -0.99
RAG1-201ENST00000299440 CFAP44Q96MT7 982 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 CABP4P57796 275 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 CHAF1AQ13111 956 aaPredicted RBP8.85□□□□□ -0.99
RAG1-201ENST00000299440 IFT140Q96RY7 1462 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 DRC7Q8IY82 874 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 NEUROD6Q96NK8 337 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 SNAPC4Q5SXM2 1469 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
RAG1-201ENST00000299440 SYNE3Q6ZMZ3 975 aa8.84□□□□□ -0.99
RAG1-201ENST00000299440 CCDC43Q96MW1 224 aaKnown RBP8.84□□□□□ -0.99
RAG1-201ENST00000299440 IGF1RP08069 1367 aa8.84□□□□□ -0.99
RAG1-201ENST00000299440 RIPK4P57078 832 aa8.84□□□□□ -0.99
RAG1-201ENST00000299440 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
RAG1-201ENST00000299440 PLEKHO1Q53GL0 409 aaPredicted RBP8.83□□□□□ -1
RAG1-201ENST00000299440 ZNF219Q9P2Y4 722 aaPredicted RBP8.83□□□□□ -1
RAG1-201ENST00000299440 L1TD1Q5T7N2 865 aaKnown RBP8.83□□□□□ -1
RAG1-201ENST00000299440 SMG6Q86US8 1419 aaKnown RBP8.83□□□□□ -1
RAG1-201ENST00000299440 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
RAG1-201ENST00000299440 MIA2Q96PC5 1412 aa8.83□□□□□ -1
RAG1-201ENST00000299440 TOM1O60784 492 aa8.83□□□□□ -1
RAG1-201ENST00000299440 G3BP1Q13283 466 aaKnown RBP eCLIP8.83□□□□□ -1
RAG1-201ENST00000299440 RCAN3Q9UKA8 241 aa8.83□□□□□ -1
RAG1-201ENST00000299440 IFIT2P09913 472 aaKnown RBP8.82□□□□□ -1
RAG1-201ENST00000299440 GRM1Q13255 1194 aa8.82□□□□□ -1
RAG1-201ENST00000299440 LRRFIP1Q32MZ4 808 aaKnown RBP8.82□□□□□ -1
RAG1-201ENST00000299440 CFAP70Q5T0N1 1121 aa8.82□□□□□ -1
RAG1-201ENST00000299440 CCDC34Q96HJ3 373 aa8.82□□□□□ -1
RAG1-201ENST00000299440 NCAPD3P42695 1498 aa8.82□□□□□ -1
RAG1-201ENST00000299440 MYOM3Q5VTT5 1437 aa8.81□□□□□ -1
RAG1-201ENST00000299440 MFAP1P55081 439 aaKnown RBP8.81□□□□□ -1
RAG1-201ENST00000299440 RUSC2Q8N2Y8 1516 aa8.81□□□□□ -1
RAG1-201ENST00000299440 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
RAG1-201ENST00000299440 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
RAG1-201ENST00000299440 ATP2B2Q01814 1243 aa8.8□□□□□ -1
RAG1-201ENST00000299440 PPP4R2Q9NY27 417 aa8.8□□□□□ -1
RAG1-201ENST00000299440 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
RAG1-201ENST00000299440 DIAPH3Q9NSV4 1193 aa8.8□□□□□ -1
RAG1-201ENST00000299440 SPG7Q9UQ90 795 aa8.8□□□□□ -1
RAG1-201ENST00000299440 WASHC4Q2M389 1173 aa8.8□□□□□ -1
RAG1-201ENST00000299440 CEP89Q96ST8 783 aa8.8□□□□□ -1
RAG1-201ENST00000299440 SF3A1Q15459 793 aaKnown RBP8.79□□□□□ -1
RAG1-201ENST00000299440 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
RAG1-201ENST00000299440 IBSPP21815 317 aaPredicted RBP8.79□□□□□ -1
RAG1-201ENST00000299440 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
RAG1-201ENST00000299440 HSPA2P54652 639 aa8.79□□□□□ -1
RAG1-201ENST00000299440 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
RAG1-201ENST00000299440 C8orf37Q96NL8 207 aa8.79□□□□□ -1
RAG1-201ENST00000299440 CDK19Q9BWU1 502 aa8.79□□□□□ -1
RAG1-201ENST00000299440 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
RAG1-201ENST00000299440 CD109Q6YHK3 1445 aa8.78□□□□□ -1
RAG1-201ENST00000299440 CNNM1Q9NRU3 951 aa8.78□□□□□ -1
RAG1-201ENST00000299440 FOXD4L1Q9NU39 408 aa8.78□□□□□ -1
RAG1-201ENST00000299440 KIF16BQ96L93 1317 aa8.78□□□□□ -1
RAG1-201ENST00000299440 ERICH2A1L162 156 aa8.78□□□□□ -1
RAG1-201ENST00000299440 MYCNP04198 464 aaPredicted RBP8.78□□□□□ -1
RAG1-201ENST00000299440 TRDNQ13061 729 aa8.78□□□□□ -1
RAG1-201ENST00000299440 ANKRD45Q5TZF3 282 aa8.78□□□□□ -1
RAG1-201ENST00000299440 ZSCAN29Q8IWY8 852 aaPredicted RBP8.78□□□□□ -1
RAG1-201ENST00000299440 MTHFSP49914 203 aa8.78□□□□□ -1
RAG1-201ENST00000299440 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
RAG1-201ENST00000299440 FOXO3O43524 673 aa8.77□□□□□ -1
RAG1-201ENST00000299440 MYL6BP14649 208 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1.01
RAG1-201ENST00000299440 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1.01
RAG1-201ENST00000299440 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
RAG1-201ENST00000299440 H3BQV1 296 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms