RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
TRIM9-201ENST00000298355 CIZ1Q9ULV3 898 aaPredicted RBP20.92■□□□□ 0.94
TRIM9-201ENST00000298355 GNL2Q13823 731 aaKnown RBP20.91■□□□□ 0.94
TRIM9-201ENST00000298355 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
TRIM9-201ENST00000298355 ARGLU1Q9NWB6 273 aaPredicted RBP20.91■□□□□ 0.94
TRIM9-201ENST00000298355 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 SKAP1Q86WV1 359 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 APPP05067 770 aa20.9■□□□□ 0.94
TRIM9-201ENST00000298355 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.94
TRIM9-201ENST00000298355 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.93
TRIM9-201ENST00000298355 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
TRIM9-201ENST00000298355 SASS6Q6UVJ0 657 aa20.88■□□□□ 0.93
TRIM9-201ENST00000298355 CWC15Q9P013 229 aaKnown RBP20.87■□□□□ 0.93
TRIM9-201ENST00000298355 KIF3AQ9Y496 699 aa20.87■□□□□ 0.93
TRIM9-201ENST00000298355 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
TRIM9-201ENST00000298355 IGF1RP08069 1367 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 CBX1P83916 185 aa20.86■□□□□ 0.93
TRIM9-201ENST00000298355 PDCL2Q8N4E4 241 aa20.85■□□□□ 0.93
TRIM9-201ENST00000298355 CDC45O75419 566 aa20.85■□□□□ 0.93
TRIM9-201ENST00000298355 XRCC6P12956 609 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
TRIM9-201ENST00000298355 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 BCL11BQ9C0K0 894 aaPredicted RBP20.84■□□□□ 0.93
TRIM9-201ENST00000298355 LETM1O95202 739 aaPredicted RBP20.83■□□□□ 0.93
TRIM9-201ENST00000298355 PDE4CQ08493 712 aa20.83■□□□□ 0.93
TRIM9-201ENST00000298355 TPD52L1Q16890 204 aaPredicted RBP20.83■□□□□ 0.93
TRIM9-201ENST00000298355 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
TRIM9-201ENST00000298355 K7ELQ4 463 aaPredicted RBP20.82■□□□□ 0.92
TRIM9-201ENST00000298355 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
TRIM9-201ENST00000298355 BCAR3O75815 825 aa20.82■□□□□ 0.92
TRIM9-201ENST00000298355 XPCQ01831 940 aaPredicted RBP20.82■□□□□ 0.92
TRIM9-201ENST00000298355 NOC3LQ8WTT2 800 aaKnown RBP20.81■□□□□ 0.92
TRIM9-201ENST00000298355 CHMP3Q9Y3E7 222 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 RABEP1Q15276 862 aa20.81■□□□□ 0.92
TRIM9-201ENST00000298355 DYNC1I1O14576 645 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 MPNDQ8N594 471 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 RUNDC1Q96C34 613 aa20.79■□□□□ 0.92
TRIM9-201ENST00000298355 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
TRIM9-201ENST00000298355 CWC22Q9HCG8 908 aaKnown RBP20.78■□□□□ 0.92
TRIM9-201ENST00000298355 SLC4A10Q6U841 1118 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 CCDC144AA2RUR9 1427 aa20.78■□□□□ 0.92
TRIM9-201ENST00000298355 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 KANK1Q14678 1352 aa20.77■□□□□ 0.92
TRIM9-201ENST00000298355 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
TRIM9-201ENST00000298355 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
TRIM9-201ENST00000298355 SF3A1Q15459 793 aaKnown RBP20.76■□□□□ 0.91
TRIM9-201ENST00000298355 CCDC112Q8NEF3 446 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 H3BQV1 296 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 IFFO2Q5TF58 517 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 PANK2Q9BZ23 570 aa20.76■□□□□ 0.91
TRIM9-201ENST00000298355 MYOM3Q5VTT5 1437 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
TRIM9-201ENST00000298355 GPATCH3Q96I76 525 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 CGNQ9P2M7 1197 aaKnown RBP20.75■□□□□ 0.91
TRIM9-201ENST00000298355 SMC3Q9UQE7 1217 aa20.75■□□□□ 0.91
TRIM9-201ENST00000298355 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
TRIM9-201ENST00000298355 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 BICD2Q8TD16 824 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 BBXQ8WY36 941 aaPredicted RBP20.74■□□□□ 0.91
TRIM9-201ENST00000298355 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 TRIM5Q9C035 493 aa20.74■□□□□ 0.91
TRIM9-201ENST00000298355 LMOD3Q0VAK6 560 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 SPC24Q8NBT2 197 aa20.73■□□□□ 0.91
TRIM9-201ENST00000298355 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 MCM5P33992 734 aa20.72■□□□□ 0.91
TRIM9-201ENST00000298355 VPS37CA5D8V6 355 aaPredicted RBP20.71■□□□□ 0.91
TRIM9-201ENST00000298355 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
TRIM9-201ENST00000298355 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
TRIM9-201ENST00000298355 ERICH4A6NGS2 130 aa20.7■□□□□ 0.91
TRIM9-201ENST00000298355 CCDC34Q96HJ3 373 aa20.7■□□□□ 0.9
TRIM9-201ENST00000298355 HSP90B2PQ58FF3 399 aa20.7■□□□□ 0.9
TRIM9-201ENST00000298355 TNPO1Q92973 898 aaKnown RBP20.69■□□□□ 0.9
TRIM9-201ENST00000298355 FAM184AQ8NB25 1140 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 MCM2P49736 904 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 API5Q9BZZ5 524 aaKnown RBP20.69■□□□□ 0.9
TRIM9-201ENST00000298355 CFTRP13569 1480 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 ACBD3Q9H3P7 528 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 CUX1P39880 1505 aa20.69■□□□□ 0.9
TRIM9-201ENST00000298355 EFCAB2Q5VUJ9 269 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 TSPYL1Q9H0U9 437 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 PPP4R3BQ5MIZ7 849 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 NPHP1O15259 732 aa20.68■□□□□ 0.9
TRIM9-201ENST00000298355 SYCE3A1L190 88 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 NEK4P51957 841 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 LEKR1Q6ZMV7 388 aa20.67■□□□□ 0.9
TRIM9-201ENST00000298355 HFM1A2PYH4 1435 aa20.66■□□□□ 0.9
TRIM9-201ENST00000298355 AK7Q96M32 723 aa20.65■□□□□ 0.9
TRIM9-201ENST00000298355 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
TRIM9-201ENST00000298355 CALCOCO1Q9P1Z2 691 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms