RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
PCDH11X-201ENST00000298274 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
PCDH11X-201ENST00000298274 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCDH11X-201ENST00000298274 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
PCDH11X-201ENST00000298274 NLRP1Q9C000 1473 aa15.74■□□□□ 0.11
PCDH11X-201ENST00000298274 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 DIP2BQ9P265 1576 aa15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 TSPOAP1O95153 1857 aa15.73■□□□□ 0.11
PCDH11X-201ENST00000298274 ARHGAP31Q2M1Z3 1444 aa15.72■□□□□ 0.11
PCDH11X-201ENST00000298274 C14orf93Q9H972 538 aaKnown RBP15.72■□□□□ 0.11
PCDH11X-201ENST00000298274 NLRP13Q86W25 1043 aa15.72■□□□□ 0.11
PCDH11X-201ENST00000298274 SCAF11Q99590 1463 aaKnown RBP15.72■□□□□ 0.11
PCDH11X-201ENST00000298274 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
PCDH11X-201ENST00000298274 MS4A1P11836 297 aa15.71■□□□□ 0.11
PCDH11X-201ENST00000298274 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.1
PCDH11X-201ENST00000298274 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
PCDH11X-201ENST00000298274 AGLP35573 1532 aa15.7■□□□□ 0.1
PCDH11X-201ENST00000298274 NOS1P29475 1434 aa15.7■□□□□ 0.1
PCDH11X-201ENST00000298274 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
PCDH11X-201ENST00000298274 CSB-PGBD3P0DP91 1061 aa15.69■□□□□ 0.1
PCDH11X-201ENST00000298274 AMPHP49418 695 aa15.68■□□□□ 0.1
PCDH11X-201ENST00000298274 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
PCDH11X-201ENST00000298274 PZPP20742 1482 aa15.68■□□□□ 0.1
PCDH11X-201ENST00000298274 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
PCDH11X-201ENST00000298274 MYBBP1AQ9BQG0 1328 aaKnown RBP15.67■□□□□ 0.1
PCDH11X-201ENST00000298274 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
PCDH11X-201ENST00000298274 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
PCDH11X-201ENST00000298274 CCDC7Q96M83 1385 aa15.67■□□□□ 0.1
PCDH11X-201ENST00000298274 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
PCDH11X-201ENST00000298274 CROCC2H7BZ55 1655 aa15.66■□□□□ 0.1
PCDH11X-201ENST00000298274 TET3O43151 1660 aa15.65■□□□□ 0.1
PCDH11X-201ENST00000298274 CDC42BPBQ9Y5S2 1711 aa15.65■□□□□ 0.1
PCDH11X-201ENST00000298274 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
PCDH11X-201ENST00000298274 RALGAPBQ86X10 1494 aa15.65■□□□□ 0.1
PCDH11X-201ENST00000298274 NPATQ14207 1427 aa15.65■□□□□ 0.1
PCDH11X-201ENST00000298274 PANK3Q9H999 370 aa15.64■□□□□ 0.09
PCDH11X-201ENST00000298274 ZMYM4Q5VZL5 1548 aa15.64■□□□□ 0.09
PCDH11X-201ENST00000298274 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
PCDH11X-201ENST00000298274 TMEM132EQ6IEE7 984 aa15.63■□□□□ 0.09
PCDH11X-201ENST00000298274 ARHGEF40Q8TER5 1519 aa15.63■□□□□ 0.09
PCDH11X-201ENST00000298274 MSH6P52701 1360 aa15.62■□□□□ 0.09
PCDH11X-201ENST00000298274 TRPM2O94759 1503 aa15.62■□□□□ 0.09
PCDH11X-201ENST00000298274 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
PCDH11X-201ENST00000298274 LMTK2Q8IWU2 1503 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 UNC13BO14795 1591 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 SIRT1Q96EB6 747 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 CDK19Q9BWU1 502 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 AMOTL2Q9Y2J4 779 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 KDM5CP41229 1560 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 CCDC61Q9Y6R9 512 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 IQGAP3Q86VI3 1631 aa15.61■□□□□ 0.09
PCDH11X-201ENST00000298274 INO80Q9ULG1 1556 aaPredicted RBP15.6■□□□□ 0.09
PCDH11X-201ENST00000298274 ABCC3O15438 1527 aa15.6■□□□□ 0.09
PCDH11X-201ENST00000298274 MAP3K4Q9Y6R4 1608 aa15.6■□□□□ 0.09
PCDH11X-201ENST00000298274 ZC3H13Q5T200 1668 aaKnown RBP15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 EFCAB6Q5THR3 1501 aa15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 SMG6Q86US8 1419 aaKnown RBP15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 NSD2O96028 1365 aa15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 TMEM2Q9UHN6 1383 aa15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
PCDH11X-201ENST00000298274 PRAG1Q86YV5 1406 aa15.58■□□□□ 0.09
PCDH11X-201ENST00000298274 ESCO1Q5FWF5 840 aa15.58■□□□□ 0.08
PCDH11X-201ENST00000298274 A0A0G2JS52 829 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 MYT1Q01538 1121 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 PTPRTO14522 1441 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 KCNH5Q8NCM2 988 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 U2AF1L5P0DN76 240 aaPredicted RBP15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 U2AF1Q01081 240 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 MIER1Q8N108 512 aa15.57■□□□□ 0.08
PCDH11X-201ENST00000298274 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 PRDM15P57071 1507 aaPredicted RBP15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 EVA1CP58658 441 aa15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 MEX3CQ5U5Q3 659 aaKnown RBP15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 NBPF8Q3BBV2 869 aa15.56■□□□□ 0.08
PCDH11X-201ENST00000298274 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 EIF5BO60841 1220 aaKnown RBP15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 WASLO00401 505 aaPredicted RBP15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 TOM1O60784 492 aa15.55■□□□□ 0.08
PCDH11X-201ENST00000298274 MYOM2P54296 1465 aa15.54■□□□□ 0.08
PCDH11X-201ENST00000298274 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
PCDH11X-201ENST00000298274 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
PCDH11X-201ENST00000298274 HDAC5Q9UQL6 1122 aa15.54■□□□□ 0.08
PCDH11X-201ENST00000298274 PLEKHG1Q9ULL1 1385 aa15.53■□□□□ 0.08
PCDH11X-201ENST00000298274 KCNA6P17658 529 aa15.53■□□□□ 0.08
PCDH11X-201ENST00000298274 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
PCDH11X-201ENST00000298274 NUTM2FA1L443 756 aa15.52■□□□□ 0.07
PCDH11X-201ENST00000298274 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.07
PCDH11X-201ENST00000298274 CCDC9Q9Y3X0 531 aaKnown RBP15.52■□□□□ 0.07
PCDH11X-201ENST00000298274 SOX12O15370 315 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms